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Property / Pathway: Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP / qualifier
 
Property / Pathway
 
Property / Pathway: UDP-GlcNAc biosynthesis, prokaryotes, Fru-6P => UDP-GlcNAc / rank
 
Normal rank
Property / Pathway: UDP-GlcNAc biosynthesis, prokaryotes, Fru-6P => UDP-GlcNAc / qualifier
 
Property / Pathway
 
Property / Pathway: Thiamine biosynthesis, archaea, AIR (+ NAD+) => TMP/TPP / rank
 
Normal rank
Property / Pathway: Thiamine biosynthesis, archaea, AIR (+ NAD+) => TMP/TPP / qualifier
 
Property / Pathway
 
Property / Pathway: De novo purine biosynthesis, PRPP + glutamine => IMP / rank
 
Normal rank
Property / Pathway: De novo purine biosynthesis, PRPP + glutamine => IMP / qualifier
 
Property / Pathway
 
Property / Pathway: Aspartate degradation II / rank
 
Normal rank
Property / Pathway: Aspartate degradation II / qualifier
 
Property / Pathway
 
Property / Pathway: Proline degradation / rank
 
Normal rank
Property / Pathway: Proline degradation / qualifier
 
Property / Pathway
 
Property / Pathway: Glycolysis (pay-off phase) / rank
 
Normal rank
Property / Pathway: Glycolysis (pay-off phase) / qualifier
 
Property / Pathway
 
Property / Pathway: Pentose phosphate pathway (non-oxidative branch) / rank
 
Normal rank
Property / Pathway: Pentose phosphate pathway (non-oxidative branch) / qualifier
 
Property / Pathway
 
Property / Pathway: Acetyl-CoA to acetate / rank
 
Normal rank
Property / Pathway: Acetyl-CoA to acetate / qualifier
 
Property / Ecosystem
 
Property / Ecosystem: insect gut metagenome / rank
 
Normal rank
Property / Ecosystem: insect gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: insect gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: mouse gut metagenome / rank
 
Normal rank
Property / Ecosystem: mouse gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: mouse gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human vaginal metagenome / rank
 
Normal rank
Property / Ecosystem: human vaginal metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human vaginal metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: freshwater metagenome / rank
 
Normal rank
Property / Ecosystem: freshwater metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: freshwater metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: coral metagenome / rank
 
Normal rank
Property / Ecosystem: coral metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: coral metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: pig gut metagenome / rank
 
Normal rank
Property / Ecosystem: pig gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: pig gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: chicken gut metagenome / rank
 
Normal rank
Property / Ecosystem: chicken gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: chicken gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine metagenome / rank
 
Normal rank
Property / Ecosystem: marine metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: marine metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: plant metagenome / rank
 
Normal rank
Property / Ecosystem: plant metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: plant metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: soil metagenome / rank
 
Normal rank
Property / Ecosystem: soil metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: soil metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human oral metagenome / rank
 
Normal rank
Property / Ecosystem: human oral metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human oral metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: activated sludge metagenome / rank
 
Normal rank
Property / Ecosystem: activated sludge metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: activated sludge metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: wastewater metagenome / rank
 
Normal rank
Property / Ecosystem: wastewater metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: wastewater metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: rhizosphere metagenome / rank
 
Normal rank
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine sediment metagenome / rank
 
Normal rank
Property / Ecosystem: marine sediment metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: marine sediment metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human lung metagenome / rank
 
Normal rank
Property / Ecosystem: human lung metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human lung metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: bovine gut metagenome / rank
 
Normal rank
Property / Ecosystem: bovine gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: bovine gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human skin metagenome / rank
 
Normal rank
Property / Ecosystem: human skin metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human skin metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human gut metagenome / rank
 
Normal rank
Property / Ecosystem: human gut metagenome / qualifier
 
Prevalence (%): 0.1
Amount0.1
Unit1
Property / Ecosystem: human gut metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / MAGs
 
Property / MAGs: no MAG matches found / rank
 
Normal rank

Latest revision as of 16:40, 15 July 2026

genome assembly
Language Label Description Also known as
default for all languages
No label defined
    English
    GCA_000008885.1
    genome assembly

      Statements

      Protologue of the species
      no current description - please contribute here
      0 references
      Comparison to close relatives
      Sodalis praecaptivus
      16S Identity %
      90.56478405315615
      POCPu
      13.166569711072329
      G+C Difference (%)
      34.620000000000005
      0 references
      Symbiopectobacterium purcellii
      16S Identity %
      90.2088772845953
      POCPu
      11.380458919319022
      G+C Difference (%)
      30.06
      0 references
      Budvicia aquatica
      16S Identity %
      90.0271370420624
      POCPu
      9.958950562198822
      G+C Difference (%)
      23.2
      0 references
      Budvicia diplopodorum
      16S Identity %
      89.99345977763244
      POCPu
      14.346666666666666
      G+C Difference (%)
      25.249999999999996
      0 references
      Chimaeribacter californicus
      16S Identity %
      89.96610169491525
      POCPu
      11.908966058465765
      G+C Difference (%)
      36.019999999999996
      0 references
      Chimaeribacter coloradensis
      16S Identity %
      89.83050847457628
      POCPu
      12.736842105263158
      G+C Difference (%)
      37.33
      0 references
      Yersinia massiliensis
      16S Identity %
      89.77572559366754
      POCPu
      12.386997499519138
      G+C Difference (%)
      24.599999999999998
      0 references
      Serratia inhibens
      16S Identity %
      89.7586431833007
      POCPu
      11.107097706339172
      G+C Difference (%)
      33.379999999999995
      0 references
      Yersinia canariae
      16S Identity %
      89.75195822454309
      POCPu
      12.775149146266202
      G+C Difference (%)
      24.69
      0 references
      Ewingella americana
      16S Identity %
      89.72513089005236
      POCPu
      12.368889768454384
      G+C Difference (%)
      31.419999999999998
      0 references
      Pectobacterium brasiliense
      16S Identity %
      89.63934426229508
      POCPu
      12.547989492826833
      G+C Difference (%)
      29.679999999999996
      0 references
      Chimaeribacter arupi
      16S Identity %
      89.62008141112618
      POCPu
      12.084592145015106
      G+C Difference (%)
      36.150000000000006
      0 references
      Cronobacter condimenti
      16S Identity %
      89.55613577023499
      POCPu
      12.489486963835155
      G+C Difference (%)
      33.3
      0 references
      Sodalis glossinidius
      16S Identity %
      89.53409858203916
      POCPu
      10.698621553884712
      G+C Difference (%)
      32.019999999999996
      0 references
      Serratia plymuthica
      16S Identity %
      89.5123580494322
      POCPu
      11.251141552511415
      G+C Difference (%)
      33.480000000000004
      0 references
      Pectobacterium polaris
      16S Identity %
      89.43248532289628
      POCPu
      12.378444084278769
      G+C Difference (%)
      29.56
      0 references
      Pectobacterium quasiaquaticum
      16S Identity %
      89.43248532289628
      0 references
      Rouxiella badensis
      16S Identity %
      89.3603133159269
      POCPu
      10.415655830502992
      G+C Difference (%)
      30.34
      0 references
      Plesiomonas shigelloides
      16S Identity %
      89.35742971887551
      POCPu
      13.717805151175813
      G+C Difference (%)
      29.55
      0 references
      Serratia entomophila
      16S Identity %
      89.34480476505625
      POCPu
      11.464968152866243
      G+C Difference (%)
      36.44
      0 references
      Yersinia rohdei
      16S Identity %
      89.31147540983606
      POCPu
      13.94772420009013
      G+C Difference (%)
      24.49
      0 references
      Serratia rubidaea
      16S Identity %
      89.29521276595744
      POCPu
      10.70809020659202
      G+C Difference (%)
      36.75
      0 references
      Pseudocitrobacter vendiensis
      16S Identity %
      89.29503916449086
      POCPu
      10.58640373637779
      G+C Difference (%)
      30.669999999999998
      0 references
      Lonsdalea quercina
      16S Identity %
      89.28809048569526
      POCPu
      15.051598288447018
      G+C Difference (%)
      32.620000000000005
      0 references
      Edwardsiella ictaluri
      16S Identity %
      89.2551087673039
      POCPu
      13.779331003494757
      G+C Difference (%)
      35.08
      0 references
      Pectobacterium versatile
      16S Identity %
      89.23679060665361
      POCPu
      12.041261654433644
      G+C Difference (%)
      29.41
      0 references
      Serratia liquefaciens
      16S Identity %
      89.23679060665361
      POCPu
      11.105092091007585
      G+C Difference (%)
      32.849999999999994
      0 references
      Dickeya fangzhongdai
      16S Identity %
      89.23679060665361
      POCPu
      12.247372675828618
      G+C Difference (%)
      34.269999999999996
      0 references
      Yersinia hibernica
      16S Identity %
      89.1732283464567
      POCPu
      12.249354774667461
      G+C Difference (%)
      25.389999999999997
      0 references
      Pectobacterium fontis
      16S Identity %
      89.17155903457274
      POCPu
      13.841226264012812
      G+C Difference (%)
      28.74
      0 references
      Serratia marcescens
      16S Identity %
      89.1290111329404
      POCPu
      11.274145616641903
      G+C Difference (%)
      37.3
      0 references
      Enterobacter chuandaensis
      16S Identity %
      89.11475409836066
      POCPu
      12.246129097124472
      G+C Difference (%)
      33.2
      0 references
      Pectobacterium wasabiae
      16S Identity %
      89.11475409836066
      POCPu
      11.765820386510041
      G+C Difference (%)
      28.069999999999997
      0 references
      Enterobacter wuhouensis
      16S Identity %
      89.10632746249185
      POCPu
      11.769245610650202
      G+C Difference (%)
      33.599999999999994
      0 references
      Enterobacter quasiroggenkampii
      16S Identity %
      89.10632746249185
      POCPu
      11.793563579277864
      G+C Difference (%)
      33.209999999999994
      0 references
      Citrobacter portucalensis
      16S Identity %
      89.09921671018277
      POCPu
      11.96696119861698
      G+C Difference (%)
      29.529999999999998
      0 references
      Rouxiella silvae
      16S Identity %
      89.09921671018277
      POCPu
      10.818713450292398
      G+C Difference (%)
      28.279999999999998
      0 references
      Cedecea davisae
      16S Identity %
      89.04918032786885
      POCPu
      12.101534828807555
      G+C Difference (%)
      31.48
      0 references
      Pectobacterium atrosepticum
      16S Identity %
      89.04918032786885
      POCPu
      12.116474496775455
      G+C Difference (%)
      28.610000000000003
      0 references
      Pectobacterium betavasculorum
      16S Identity %
      89.04918032786885
      POCPu
      12.415210688591984
      G+C Difference (%)
      28.679999999999996
      0 references
      Enterobacter dykesii
      16S Identity %
      89.04109589041096
      POCPu
      12.700062357098316
      G+C Difference (%)
      33.370000000000005
      0 references
      Enterobacter vonholyi
      16S Identity %
      89.03394255874673
      POCPu
      12.300450266066312
      G+C Difference (%)
      33.08
      0 references
      Enterobacter quasimori
      16S Identity %
      89.02677988242978
      0 references
      Pectobacterium aroidearum
      16S Identity %
      88.98360655737704
      POCPu
      11.589030803906837
      G+C Difference (%)
      29.139999999999997
      0 references
      Klebsiella aerogenes
      16S Identity %
      88.97586431833007
      POCPu
      11.066835718166999
      G+C Difference (%)
      32.370000000000005
      0 references
      Citrobacter meridianamericanus
      16S Identity %
      88.9686684073107
      0 references
      Enterobacter quasihormaechei
      16S Identity %
      88.91063274624919
      POCPu
      12.624172185430464
      G+C Difference (%)
      33.42999999999999
      0 references
      Pectobacterium parmentieri
      16S Identity %
      88.91063274624919
      POCPu
      11.906599768429178
      G+C Difference (%)
      27.919999999999998
      0 references
      Pectobacterium punjabense
      16S Identity %
      88.64970645792563
      POCPu
      12.255593630316469
      G+C Difference (%)
      28.19
      0 references
      Lonsdalea britannica
      POCPu
      14.359666891739817
      G+C Difference (%)
      32.59
      0 references
      Enterobacter hormaechei
      POCPu
      11.689549961861175
      G+C Difference (%)
      32.620000000000005
      0 references
      Pectobacterium carotovorum
      POCPu
      12.594407021841192
      G+C Difference (%)
      29.419999999999998
      0 references
      CAZyme
      GH13
      Occurance
      2
      0 references
      GH28
      Occurance
      1
      0 references
      GH73
      Occurance
      1
      0 references
      GH23
      Occurance
      2
      0 references
      GH18
      Occurance
      1
      0 references
      GT13
      Occurance
      2
      0 references
      GT2
      Occurance
      5
      0 references
      GT83
      Occurance
      2
      0 references
      GT51
      Occurance
      2
      0 references
      GT4
      Occurance
      7
      0 references
      GT22
      Occurance
      1
      0 references
      GT28
      Occurance
      4
      0 references
      GT30
      Occurance
      1
      0 references
      GT19
      Occurance
      1
      0 references
      CE11
      Occurance
      1
      0 references
      CBM13
      Occurance
      2
      0 references
      CBM50
      Occurance
      6
      0 references
      CBM2
      Occurance
      1
      0 references
      Pathway
      MAGs
      no MAG matches found
      0 references
       
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