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GCA_028702895.1 (Q194392): Difference between revisions

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Added qualifier: Phylum (P11): Iainarchaeota (Q48656)
 
(110 intermediate revisions by the same user not shown)
Property / GTDB: Archaea / qualifier
 
Property / GTDB: Archaea / qualifier
 
Property / GTDB: Archaea / qualifier
 
Property / GTDB: Archaea / qualifier
 
Property / GTDB: Archaea / qualifier
 
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanonatronarchaeum thermophilum / rank
 
Normal rank
Property / Comparison to close relatives: Methanonatronarchaeum thermophilum / qualifier
 
16S Identity %: 70.63655030800821
Amount70.63655030800821
Unit1
Property / Comparison to close relatives: Methanonatronarchaeum thermophilum / qualifier
 
POCPu: 1.8945634266886324
Amount1.8945634266886324
Unit1
Property / Comparison to close relatives: Methanonatronarchaeum thermophilum / qualifier
 
G+C Difference (%): 11.099999999999998
Amount11.099999999999998
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Acidianus infernus / rank
 
Normal rank
Property / Comparison to close relatives: Acidianus infernus / qualifier
 
16S Identity %: 68.3044982698962
Amount68.3044982698962
Unit1
Property / Comparison to close relatives: Acidianus infernus / qualifier
 
POCPu: 0.6859528780196839
Amount0.6859528780196839
Unit1
Property / Comparison to close relatives: Acidianus infernus / qualifier
 
G+C Difference (%): 7.559999999999999
Amount7.559999999999999
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Acidianus ambivalens / rank
 
Normal rank
Property / Comparison to close relatives: Acidianus ambivalens / qualifier
 
16S Identity %: 68.00554016620498
Amount68.00554016620498
Unit1
Property / Comparison to close relatives: Acidianus ambivalens / qualifier
 
POCPu: 0.5621135469364812
Amount0.5621135469364812
Unit1
Property / Comparison to close relatives: Acidianus ambivalens / qualifier
 
G+C Difference (%): 7.429999999999996
Amount7.429999999999996
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Algoriphagus lutimaris / rank
 
Normal rank
Property / Comparison to close relatives: Algoriphagus lutimaris / qualifier
 
16S Identity %: 64.78076379066479
Amount64.78076379066479
Unit1
Property / Comparison to close relatives: Algoriphagus lutimaris / qualifier
 
POCPu: 0.12383900928792571
Amount0.12383900928792571
Unit1
Property / Comparison to close relatives: Algoriphagus lutimaris / qualifier
 
G+C Difference (%): 11.879999999999999
Amount11.879999999999999
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Lunatimonas lonarensis / rank
 
Normal rank
Property / Comparison to close relatives: Lunatimonas lonarensis / qualifier
 
16S Identity %: 63.92536281962682
Amount63.92536281962682
Unit1
Property / Comparison to close relatives: Lunatimonas lonarensis / qualifier
 
POCPu: 0.22463496817671283
Amount0.22463496817671283
Unit1
Property / Comparison to close relatives: Lunatimonas lonarensis / qualifier
 
G+C Difference (%): 20.01
Amount20.01
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Lunatimonas salinarum / rank
 
Normal rank
Property / Comparison to close relatives: Lunatimonas salinarum / qualifier
 
16S Identity %: 63.738738738738746
Amount63.738738738738746
Unit1
Property / Comparison to close relatives: Lunatimonas salinarum / qualifier
 
POCPu: 0.2038169353344451
Amount0.2038169353344451
Unit1
Property / Comparison to close relatives: Lunatimonas salinarum / qualifier
 
G+C Difference (%): 19.290000000000003
Amount19.290000000000003
Unit1
Property / CAZyme
 
Property / CAZyme: GH28 / rank
 
Normal rank
Property / CAZyme: GH28 / qualifier
 
Occurance: 2
Amount2
Unit1
Property / CAZyme
 
Property / CAZyme: GH13 / rank
 
Normal rank
Property / CAZyme: GH13 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT66 / rank
 
Normal rank
Property / CAZyme: GT66 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT2 / rank
 
Normal rank
Property / CAZyme: GT2 / qualifier
 
Occurance: 3
Amount3
Unit1
Property / CAZyme
 
Property / CAZyme: GT10 / rank
 
Normal rank
Property / CAZyme: GT10 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT1 / rank
 
Normal rank
Property / CAZyme: GT1 / qualifier
 
Occurance: 2
Amount2
Unit1
Property / CAZyme
 
Property / CAZyme: CBM50 / rank
 
Normal rank
Property / CAZyme: CBM50 / qualifier
 
Occurance: 3
Amount3
Unit1
Property / Pathway
 
Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / rank
 
Normal rank
Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / qualifier
 
Property / Pathway
 
Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / rank
 
Normal rank
Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / qualifier
 
Property / Pathway
 
Property / Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA / rank
 
Normal rank
Property / Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA / qualifier
 
Property / Pathway
 
Property / Pathway: Pyruvate:ferredoxin oxidoreductase / rank
 
Normal rank
Property / Pathway: Pyruvate:ferredoxin oxidoreductase / qualifier
 
Property / Pathway
 
Property / Pathway: Acetyl-CoA to acetate / rank
 
Normal rank
Property / Pathway: Acetyl-CoA to acetate / qualifier
 
Property / Ecosystem
 
Property / Ecosystem: insect gut metagenome / rank
 
Normal rank
Property / Ecosystem: insect gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: insect gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: mouse gut metagenome / rank
 
Normal rank
Property / Ecosystem: mouse gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: mouse gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human vaginal metagenome / rank
 
Normal rank
Property / Ecosystem: human vaginal metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human vaginal metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: freshwater metagenome / rank
 
Normal rank
Property / Ecosystem: freshwater metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: freshwater metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: coral metagenome / rank
 
Normal rank
Property / Ecosystem: coral metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: coral metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: pig gut metagenome / rank
 
Normal rank
Property / Ecosystem: pig gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: pig gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: chicken gut metagenome / rank
 
Normal rank
Property / Ecosystem: chicken gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: chicken gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine metagenome / rank
 
Normal rank
Property / Ecosystem: marine metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: marine metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: plant metagenome / rank
 
Normal rank
Property / Ecosystem: plant metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: plant metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: soil metagenome / rank
 
Normal rank
Property / Ecosystem: soil metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: soil metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human oral metagenome / rank
 
Normal rank
Property / Ecosystem: human oral metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human oral metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: activated sludge metagenome / rank
 
Normal rank
Property / Ecosystem: activated sludge metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: activated sludge metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: wastewater metagenome / rank
 
Normal rank
Property / Ecosystem: wastewater metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: wastewater metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: rhizosphere metagenome / rank
 
Normal rank
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine sediment metagenome / rank
 
Normal rank
Property / Ecosystem: marine sediment metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: marine sediment metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human lung metagenome / rank
 
Normal rank
Property / Ecosystem: human lung metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human lung metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: bovine gut metagenome / rank
 
Normal rank
Property / Ecosystem: bovine gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: bovine gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human skin metagenome / rank
 
Normal rank
Property / Ecosystem: human skin metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human skin metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human gut metagenome / rank
 
Normal rank
Property / Ecosystem: human gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / MAGs
 
Property / MAGs: no MAG matches found / rank
 
Normal rank

Latest revision as of 21:52, 19 August 2026

genome assembly
Language Label Description Also known as
default for all languages
No label defined
    English
    GCA_028702895.1
    genome assembly

      Statements

      no current description - please contribute here
      0 references
      70.63655030800821
      1.8945634266886324
      11.099999999999998
      0 references
      68.3044982698962
      0.6859528780196839
      7.559999999999999
      0 references
      68.00554016620498
      0.5621135469364812
      7.429999999999996
      0 references
      64.78076379066479
      0.12383900928792571
      11.879999999999999
      0 references
      63.92536281962682
      0.22463496817671283
      0 references
      63.738738738738746
      0.2038169353344451
      19.290000000000003
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references