GCA_018901755.1 (Q194066): Difference between revisions
Appearance
Added qualifier: 16S Identity % (P3): 25.71225071225071 |
Created claim: MAGs (P28): no MAG matches found (Q42716) |
||||||
| (153 intermediate revisions by the same user not shown) | |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobacterium subterraneum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobacterium subterraneum / qualifier | |||||||
16S Identity %: 25.5781359495445
| |||||||
| Property / Comparison to close relatives: Methanobacterium subterraneum / qualifier | |||||||
POCPu: 1.704709621496677
| |||||||
| Property / Comparison to close relatives: Methanobacterium subterraneum / qualifier | |||||||
G+C Difference (%): 7.459999999999997
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanosphaera cuniculi / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanosphaera cuniculi / qualifier | |||||||
16S Identity %: 25.526137135098438
| |||||||
| Property / Comparison to close relatives: Methanosphaera cuniculi / qualifier | |||||||
POCPu: 2.2622699386503067
| |||||||
| Property / Comparison to close relatives: Methanosphaera cuniculi / qualifier | |||||||
G+C Difference (%): 3.860000000000003
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobrevibacter curvatus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobrevibacter curvatus / qualifier | |||||||
16S Identity %: 25.49889135254989
| |||||||
| Property / Comparison to close relatives: Methanobrevibacter curvatus / qualifier | |||||||
POCPu: 1.8030050083472453
| |||||||
| Property / Comparison to close relatives: Methanobrevibacter curvatus / qualifier | |||||||
G+C Difference (%): 6.220000000000002
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobacterium congolense / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobacterium congolense / qualifier | |||||||
16S Identity %: 25.277008310249304
| |||||||
| Property / Comparison to close relatives: Methanobacterium congolense / qualifier | |||||||
POCPu: 1.8705463182897861
| |||||||
| Property / Comparison to close relatives: Methanobacterium congolense / qualifier | |||||||
G+C Difference (%): 6.550000000000001
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobrevibacter ruminantium / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobrevibacter ruminantium / qualifier | |||||||
16S Identity %: 25.262421273617914
| |||||||
| Property / Comparison to close relatives: Methanobrevibacter ruminantium / qualifier | |||||||
POCPu: 1.3966480446927374
| |||||||
| Property / Comparison to close relatives: Methanobrevibacter ruminantium / qualifier | |||||||
G+C Difference (%): 0.6999999999999993
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobacterium kanagiense / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobacterium kanagiense / qualifier | |||||||
16S Identity %: 24.725274725274726
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanolobus mangrovi / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanolobus mangrovi / qualifier | |||||||
16S Identity %: 24.641638225255974
| |||||||
| Property / Comparison to close relatives: Methanolobus mangrovi / qualifier | |||||||
POCPu: 1.7847025495750706
| |||||||
| Property / Comparison to close relatives: Methanolobus mangrovi / qualifier | |||||||
G+C Difference (%): 9.669999999999998
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobacterium petrolearium / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobacterium petrolearium / qualifier | |||||||
16S Identity %: 24.60202604920405
| |||||||
| Property / Comparison to close relatives: Methanobacterium petrolearium / qualifier | |||||||
POCPu: 1.748148148148148
| |||||||
| Property / Comparison to close relatives: Methanobacterium petrolearium / qualifier | |||||||
G+C Difference (%): 5.830000000000002
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobacterium formicicum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobacterium formicicum / qualifier | |||||||
16S Identity %: 24.597364568081993
| |||||||
| Property / Comparison to close relatives: Methanobacterium formicicum / qualifier | |||||||
POCPu: 1.9671168526130358
| |||||||
| Property / Comparison to close relatives: Methanobacterium formicicum / qualifier | |||||||
G+C Difference (%): 9.429999999999996
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanosphaera stadtmanae / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanosphaera stadtmanae / qualifier | |||||||
16S Identity %: 23.951285520974288
| |||||||
| Property / Comparison to close relatives: Methanosphaera stadtmanae / qualifier | |||||||
POCPu: 2.0194174757281553
| |||||||
| Property / Comparison to close relatives: Methanosphaera stadtmanae / qualifier | |||||||
G+C Difference (%): 4.310000000000002
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobacterium beijingense / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobacterium beijingense / qualifier | |||||||
16S Identity %: 23.900709219858157
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobacterium lacus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobacterium lacus / qualifier | |||||||
16S Identity %: 23.56450410141685
| |||||||
| Property / Comparison to close relatives: Methanobacterium lacus / qualifier | |||||||
POCPu: 1.7207334273624826
| |||||||
| Property / Comparison to close relatives: Methanobacterium lacus / qualifier | |||||||
G+C Difference (%): 3.889999999999997
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Picrophilus oshimae / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Picrophilus oshimae / qualifier | |||||||
16S Identity %: 23.47288949897049
| |||||||
| Property / Comparison to close relatives: Picrophilus oshimae / qualifier | |||||||
POCPu: 1.303181295515523
| |||||||
| Property / Comparison to close relatives: Picrophilus oshimae / qualifier | |||||||
G+C Difference (%): 4.039999999999996
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobrevibacter acididurans / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobrevibacter acididurans / qualifier | |||||||
16S Identity %: 23.42475908080059
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobrevibacter olleyae / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobrevibacter olleyae / qualifier | |||||||
16S Identity %: 23.370429252782195
| |||||||
| Property / Comparison to close relatives: Methanobrevibacter olleyae / qualifier | |||||||
POCPu: 1.5641663704230357
| |||||||
| Property / Comparison to close relatives: Methanobrevibacter olleyae / qualifier | |||||||
G+C Difference (%): 5.140000000000001
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanosarcina baltica / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanosarcina baltica / qualifier | |||||||
16S Identity %: 23.358778625954198
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobacterium ferruginis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobacterium ferruginis / qualifier | |||||||
16S Identity %: 23.142857142857142
| |||||||
| Property / Comparison to close relatives: Methanobacterium ferruginis / qualifier | |||||||
POCPu: 1.6439049064238747
| |||||||
| Property / Comparison to close relatives: Methanobacterium ferruginis / qualifier | |||||||
G+C Difference (%): 5.449999999999999
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanolobus profundi / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanolobus profundi / qualifier | |||||||
16S Identity %: 23.005032350826742
| |||||||
| Property / Comparison to close relatives: Methanolobus profundi / qualifier | |||||||
POCPu: 1.474701245868294
| |||||||
| Property / Comparison to close relatives: Methanolobus profundi / qualifier | |||||||
G+C Difference (%): 10.629999999999999
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Picrophilus torridus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Picrophilus torridus / qualifier | |||||||
16S Identity %: 22.876712328767123
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanocella arvoryzae / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanocella arvoryzae / qualifier | |||||||
16S Identity %: 22.668481960517358
| |||||||
| Property / Comparison to close relatives: Methanocella arvoryzae / qualifier | |||||||
POCPu: 2.0289855072463765
| |||||||
| Property / Comparison to close relatives: Methanocella arvoryzae / qualifier | |||||||
G+C Difference (%): 22.66
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH109 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH109 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH130 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH130 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH19 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH19 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT7 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT7 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT66 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT66 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT4 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT4 / qualifier | |||||||
Occurance: 4
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT2 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT2 / qualifier | |||||||
Occurance: 6
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: PL12 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: PL12 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CE4 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CE4 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM50 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM50 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM5 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM5 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / Pathway | |||||||
| Property / Pathway: Arginine degradation I / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Arginine degradation I / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Acetate to acetyl-CoA / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Acetate to acetyl-CoA / qualifier | |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: insect gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: mouse gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human vaginal metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: freshwater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Prevalence (%): 1.9
| |||||||
| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: coral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: coral metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: coral metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: pig gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: chicken gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: marine metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine metagenome / qualifier | |||||||
Prevalence (%): 0.1
| |||||||
| Property / Ecosystem: marine metagenome / qualifier | |||||||
Relative abundance (%): 0.02
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: plant metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: plant metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: plant metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: soil metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: soil metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: soil metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human oral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: activated sludge metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: wastewater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: rhizosphere metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: marine sediment metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Prevalence (%): 0.1
| |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human lung metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: bovine gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human skin metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / MAGs | |||||||
| Property / MAGs: no MAG matches found / rank | |||||||
Normal rank | |||||||
Latest revision as of 21:01, 19 August 2026
genome assembly
| Language | Label | Description | Also known as |
|---|---|---|---|
| default for all languages | No label defined |
||
| English | GCA_018901755.1 |
genome assembly |
Statements
no current description - please contribute here
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references