GCA_018818285.1 (Q191164): Difference between revisions
Appearance
Added qualifier: 16S Identity % (P3): 23.18840579710145 |
Created claim: MAGs (P28): no MAG matches found (Q42716) |
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| Property / Comparison to close relatives: Salarchaeum japonicum / qualifier | |||||||
POCPu: 0.4735128736312519
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| Property / Comparison to close relatives: Salarchaeum japonicum / qualifier | |||||||
G+C Difference (%): 38.3
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanonatronarchaeum thermophilum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanonatronarchaeum thermophilum / qualifier | |||||||
16S Identity %: 23.1353591160221
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| Property / Comparison to close relatives: Methanonatronarchaeum thermophilum / qualifier | |||||||
POCPu: 1.191996594295445
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| Property / Comparison to close relatives: Methanonatronarchaeum thermophilum / qualifier | |||||||
G+C Difference (%): 8.7
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanosphaerula palustris / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanosphaerula palustris / qualifier | |||||||
16S Identity %: 23.125
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| Property / Comparison to close relatives: Methanosphaerula palustris / qualifier | |||||||
POCPu: 0.9136212624584719
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| Property / Comparison to close relatives: Methanosphaerula palustris / qualifier | |||||||
G+C Difference (%): 26.150000000000002
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanosalsum zhilinae / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanosalsum zhilinae / qualifier | |||||||
16S Identity %: 23.066004258339248
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| Property / Comparison to close relatives: Methanosalsum zhilinae / qualifier | |||||||
POCPu: 1.0839160839160837
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| Property / Comparison to close relatives: Methanosalsum zhilinae / qualifier | |||||||
G+C Difference (%): 9.959999999999997
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Halobacterium rubrum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Halobacterium rubrum / qualifier | |||||||
16S Identity %: 22.981366459627328
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| Property / Comparison to close relatives: Halobacterium rubrum / qualifier | |||||||
POCPu: 0.4910385465259023
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| Property / Comparison to close relatives: Halobacterium rubrum / qualifier | |||||||
G+C Difference (%): 39.41
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanoregula boonei / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanoregula boonei / qualifier | |||||||
16S Identity %: 22.909346451159525
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| Property / Comparison to close relatives: Methanoregula boonei / qualifier | |||||||
POCPu: 0.8628384409401963
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| Property / Comparison to close relatives: Methanoregula boonei / qualifier | |||||||
G+C Difference (%): 25.31
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanomethylovorans hollandica / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanomethylovorans hollandica / qualifier | |||||||
16S Identity %: 22.89325842696629
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| Property / Comparison to close relatives: Methanomethylovorans hollandica / qualifier | |||||||
POCPu: 1.095100864553314
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| Property / Comparison to close relatives: Methanomethylovorans hollandica / qualifier | |||||||
G+C Difference (%): 12.669999999999998
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanothrix soehngenii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanothrix soehngenii / qualifier | |||||||
16S Identity %: 22.874913614374567
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| Property / Comparison to close relatives: Methanothrix soehngenii / qualifier | |||||||
POCPu: 1.1852615305333678
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| Property / Comparison to close relatives: Methanothrix soehngenii / qualifier | |||||||
G+C Difference (%): 21.790000000000003
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobacterium aarhusense / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobacterium aarhusense / qualifier | |||||||
16S Identity %: 22.854973424449508
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Halocalculus aciditolerans / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Halocalculus aciditolerans / qualifier | |||||||
16S Identity %: 22.843340234644582
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| Property / Comparison to close relatives: Halocalculus aciditolerans / qualifier | |||||||
POCPu: 0.3961780470752739
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| Property / Comparison to close relatives: Halocalculus aciditolerans / qualifier | |||||||
G+C Difference (%): 37.709999999999994
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Halobacterium jilantaiense / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Halobacterium jilantaiense / qualifier | |||||||
16S Identity %: 22.705314009661837
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| Property / Comparison to close relatives: Halobacterium jilantaiense / qualifier | |||||||
POCPu: 0.4844467108618052
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| Property / Comparison to close relatives: Halobacterium jilantaiense / qualifier | |||||||
G+C Difference (%): 38.730000000000004
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Natronomonas salsuginis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Natronomonas salsuginis / qualifier | |||||||
16S Identity %: 22.641509433962266
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| Property / Comparison to close relatives: Natronomonas salsuginis / qualifier | |||||||
POCPu: 0.34058160859313596
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| Property / Comparison to close relatives: Natronomonas salsuginis / qualifier | |||||||
G+C Difference (%): 34
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Natronomonas moolapensis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Natronomonas moolapensis / qualifier | |||||||
16S Identity %: 21.952908587257618
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| Property / Comparison to close relatives: Natronomonas moolapensis / qualifier | |||||||
POCPu: 0.34620505992010653
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| Property / Comparison to close relatives: Natronomonas moolapensis / qualifier | |||||||
G+C Difference (%): 35.33
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Natronomonas pharaonis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Natronomonas pharaonis / qualifier | |||||||
16S Identity %: 21.952908587257618
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| Property / Comparison to close relatives: Natronomonas pharaonis / qualifier | |||||||
POCPu: 0.4073872895165671
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| Property / Comparison to close relatives: Natronomonas pharaonis / qualifier | |||||||
G+C Difference (%): 33.92
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobacterium movilense / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobacterium movilense / qualifier | |||||||
16S Identity %: 21.62162162162162
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobacterium bryantii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobacterium bryantii / qualifier | |||||||
16S Identity %: 21.606425702811244
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| Property / Comparison to close relatives: Methanobacterium bryantii / qualifier | |||||||
POCPu: 0.9390801830002408
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| Property / Comparison to close relatives: Methanobacterium bryantii / qualifier | |||||||
G+C Difference (%): 3.9899999999999984
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| Property / CAZyme | |||||||
| Property / CAZyme: GH109 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH109 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GH0 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH0 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT7 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT7 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT13 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT13 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT66 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT66 / qualifier | |||||||
Occurance: 2
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| Property / CAZyme | |||||||
| Property / CAZyme: GT4 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT4 / qualifier | |||||||
Occurance: 7
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| Property / CAZyme | |||||||
| Property / CAZyme: GT22 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT22 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT2 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT2 / qualifier | |||||||
Occurance: 11
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| Property / CAZyme | |||||||
| Property / CAZyme: GT9 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT9 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT8 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT8 / qualifier | |||||||
Occurance: 2
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| Property / CAZyme | |||||||
| Property / CAZyme: CE4 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CE4 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: CBM50 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM50 / qualifier | |||||||
Occurance: 2
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| Property / Pathway | |||||||
| Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / qualifier | |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: insect gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: mouse gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human vaginal metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: freshwater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: coral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: coral metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: coral metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: pig gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: chicken gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: marine metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: marine metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: plant metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: plant metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: plant metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: soil metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: soil metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: soil metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human oral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: activated sludge metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: wastewater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: rhizosphere metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: marine sediment metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human lung metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: bovine gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human skin metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / MAGs | |||||||
| Property / MAGs: no MAG matches found / rank | |||||||
Normal rank | |||||||
Latest revision as of 16:46, 19 August 2026
genome assembly
| Language | Label | Description | Also known as |
|---|---|---|---|
| default for all languages | No label defined |
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| English | GCA_018818285.1 |
genome assembly |
Statements
no current description - please contribute here
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