GCA_018816585.1 (Q190834): Difference between revisions
Appearance
Added qualifier: 16S Identity % (P3): 22.74590163934426 |
Created claim: MAGs (P28): no MAG matches found (Q42716) |
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| Property / Comparison to close relatives: Pyrobaculum ferrireducens / qualifier | |||||||
POCPu: 0.4094165813715456
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| Property / Comparison to close relatives: Pyrobaculum ferrireducens / qualifier | |||||||
G+C Difference (%): 29.24
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Pyrobaculum oguniense / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Pyrobaculum oguniense / qualifier | |||||||
16S Identity %: 22.686151704940848
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| Property / Comparison to close relatives: Pyrobaculum oguniense / qualifier | |||||||
POCPu: 0.5437469105289174
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| Property / Comparison to close relatives: Pyrobaculum oguniense / qualifier | |||||||
G+C Difference (%): 27.319999999999997
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanocaldococcus villosus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanocaldococcus villosus / qualifier | |||||||
16S Identity %: 22.605099931082012
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| Property / Comparison to close relatives: Methanocaldococcus villosus / qualifier | |||||||
POCPu: 3.30378726833199
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| Property / Comparison to close relatives: Methanocaldococcus villosus / qualifier | |||||||
G+C Difference (%): 1.7699999999999996
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Pyrobaculum neutrophilum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Pyrobaculum neutrophilum / qualifier | |||||||
16S Identity %: 22.5718194254446
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| Property / Comparison to close relatives: Pyrobaculum neutrophilum / qualifier | |||||||
POCPu: 0.5705229793977813
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| Property / Comparison to close relatives: Pyrobaculum neutrophilum / qualifier | |||||||
G+C Difference (%): 32.17999999999999
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Pyrobaculum igneiluti / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Pyrobaculum igneiluti / qualifier | |||||||
16S Identity %: 22.525597269624573
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Pyrobaculum islandicum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Pyrobaculum islandicum / qualifier | |||||||
16S Identity %: 22.491349480968857
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| Property / Comparison to close relatives: Pyrobaculum islandicum / qualifier | |||||||
POCPu: 0.6097560975609756
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| Property / Comparison to close relatives: Pyrobaculum islandicum / qualifier | |||||||
G+C Difference (%): 21.87
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanocaldococcus jannaschii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanocaldococcus jannaschii / qualifier | |||||||
16S Identity %: 22.419685577580314
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| Property / Comparison to close relatives: Methanocaldococcus jannaschii / qualifier | |||||||
POCPu: 2.616571620261657
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| Property / Comparison to close relatives: Methanocaldococcus jannaschii / qualifier | |||||||
G+C Difference (%): 3.5599999999999987
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanocaldococcus bathoardescens / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanocaldococcus bathoardescens / qualifier | |||||||
16S Identity %: 22.33606557377049
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| Property / Comparison to close relatives: Methanocaldococcus bathoardescens / qualifier | |||||||
POCPu: 3.093525179856115
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| Property / Comparison to close relatives: Methanocaldococcus bathoardescens / qualifier | |||||||
G+C Difference (%): 3.0599999999999987
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanotorris formicicus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanotorris formicicus / qualifier | |||||||
16S Identity %: 22.29822161422709
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| Property / Comparison to close relatives: Methanotorris formicicus / qualifier | |||||||
POCPu: 2.5783289817232378
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| Property / Comparison to close relatives: Methanotorris formicicus / qualifier | |||||||
G+C Difference (%): 4.709999999999997
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanotorris igneus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanotorris igneus / qualifier | |||||||
16S Identity %: 22.214627477785374
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| Property / Comparison to close relatives: Methanotorris igneus / qualifier | |||||||
POCPu: 2.8708133971291865
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| Property / Comparison to close relatives: Methanotorris igneus / qualifier | |||||||
G+C Difference (%): 4.569999999999997
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Pyrobaculum calidifontis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Pyrobaculum calidifontis / qualifier | |||||||
16S Identity %: 22.131147540983605
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| Property / Comparison to close relatives: Pyrobaculum calidifontis / qualifier | |||||||
POCPu: 0.5301914580265096
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| Property / Comparison to close relatives: Pyrobaculum calidifontis / qualifier | |||||||
G+C Difference (%): 29.419999999999998
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanocaldococcus vulcanius / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanocaldococcus vulcanius / qualifier | |||||||
16S Identity %: 22.096317280453256
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| Property / Comparison to close relatives: Methanocaldococcus vulcanius / qualifier | |||||||
POCPu: 2.6527050610820244
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| Property / Comparison to close relatives: Methanocaldococcus vulcanius / qualifier | |||||||
G+C Difference (%): 3.849999999999998
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Vulcanisaeta distributa / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Vulcanisaeta distributa / qualifier | |||||||
16S Identity %: 21.638225255972696
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| Property / Comparison to close relatives: Vulcanisaeta distributa / qualifier | |||||||
POCPu: 0.6804572672836147
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| Property / Comparison to close relatives: Vulcanisaeta distributa / qualifier | |||||||
G+C Difference (%): 17.7
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| Property / CAZyme | |||||||
| Property / CAZyme: GH23 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH23 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GH28 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH28 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GH0 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH0 / qualifier | |||||||
Occurance: 2
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| Property / CAZyme | |||||||
| Property / CAZyme: GH109 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH109 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GH43 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH43 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT66 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT66 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT2 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT2 / qualifier | |||||||
Occurance: 14
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| Property / CAZyme | |||||||
| Property / CAZyme: GT4 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT4 / qualifier | |||||||
Occurance: 3
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| Property / CAZyme | |||||||
| Property / CAZyme: GT1 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT1 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: CBM50 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM50 / qualifier | |||||||
Occurance: 4
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| Property / Pathway | |||||||
| Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Pyruvate:ferredoxin oxidoreductase / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Pyruvate:ferredoxin oxidoreductase / qualifier | |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: insect gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: mouse gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human vaginal metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: freshwater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Prevalence (%): 0.4
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| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: coral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: coral metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: coral metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: pig gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: chicken gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: marine metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: marine metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: plant metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: plant metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: plant metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: soil metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: soil metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: soil metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human oral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: activated sludge metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: wastewater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: rhizosphere metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: marine sediment metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human lung metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: bovine gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human skin metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / MAGs | |||||||
| Property / MAGs: no MAG matches found / rank | |||||||
Normal rank | |||||||
Latest revision as of 16:20, 19 August 2026
genome assembly
| Language | Label | Description | Also known as |
|---|---|---|---|
| default for all languages | No label defined |
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| English | GCA_018816585.1 |
genome assembly |
Statements
no current description - please contribute here
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