GCA_018653365.1 (Q186541): Difference between revisions
Appearance
Added qualifier: 16S Identity % (P3): 74.74600870827285 |
Created claim: MAGs (P28): no MAG matches found (Q42716) |
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| (174 intermediate revisions by the same user not shown) | |||||||
| Property / Comparison to close relatives: Methanobacterium petrolearium / qualifier | |||||||
POCPu: 2.086858432036097
| |||||||
| Property / Comparison to close relatives: Methanobacterium petrolearium / qualifier | |||||||
G+C Difference (%): 3.7900000000000063
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanofervidicoccus abyssi / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanofervidicoccus abyssi / qualifier | |||||||
16S Identity %: 74.67488021902807
| |||||||
| Property / Comparison to close relatives: Methanofervidicoccus abyssi / qualifier | |||||||
POCPu: 3.386372909016728
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| Property / Comparison to close relatives: Methanofervidicoccus abyssi / qualifier | |||||||
G+C Difference (%): 1.2700000000000031
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanocaldococcus bathoardescens / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanocaldococcus bathoardescens / qualifier | |||||||
16S Identity %: 74.67488021902807
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| Property / Comparison to close relatives: Methanocaldococcus bathoardescens / qualifier | |||||||
POCPu: 2.7177700348432055
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| Property / Comparison to close relatives: Methanocaldococcus bathoardescens / qualifier | |||||||
G+C Difference (%): 3.1899999999999977
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanocaldococcus jannaschii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanocaldococcus jannaschii / qualifier | |||||||
16S Identity %: 74.65753424657534
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| Property / Comparison to close relatives: Methanocaldococcus jannaschii / qualifier | |||||||
POCPu: 2.6050146532074243
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| Property / Comparison to close relatives: Methanocaldococcus jannaschii / qualifier | |||||||
G+C Difference (%): 2.6899999999999977
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanoculleus thermophilus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanoculleus thermophilus / qualifier | |||||||
16S Identity %: 74.63617463617463
| |||||||
| Property / Comparison to close relatives: Methanoculleus thermophilus / qualifier | |||||||
POCPu: 2.465197215777262
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| Property / Comparison to close relatives: Methanoculleus thermophilus / qualifier | |||||||
G+C Difference (%): 25.340000000000003
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobacterium kanagiense / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobacterium kanagiense / qualifier | |||||||
16S Identity %: 74.62068965517241
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanocaldococcus infernus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanocaldococcus infernus / qualifier | |||||||
16S Identity %: 74.60535346602609
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| Property / Comparison to close relatives: Methanocaldococcus infernus / qualifier | |||||||
POCPu: 2.923538230884558
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| Property / Comparison to close relatives: Methanocaldococcus infernus / qualifier | |||||||
G+C Difference (%): 0.35999999999999943
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobrevibacter curvatus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobrevibacter curvatus / qualifier | |||||||
16S Identity %: 74.57375833951076
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| Property / Comparison to close relatives: Methanobrevibacter curvatus / qualifier | |||||||
POCPu: 1.9583070120025268
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| Property / Comparison to close relatives: Methanobrevibacter curvatus / qualifier | |||||||
G+C Difference (%): 8.259999999999998
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobrevibacter smithii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobrevibacter smithii / qualifier | |||||||
16S Identity %: 74.55540355677155
| |||||||
| Property / Comparison to close relatives: Methanobrevibacter smithii / qualifier | |||||||
POCPu: 2.1856086079354404
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| Property / Comparison to close relatives: Methanobrevibacter smithii / qualifier | |||||||
G+C Difference (%): 2.9499999999999957
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanothermobacter thermophilus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanothermobacter thermophilus / qualifier | |||||||
16S Identity %: 74.48763250883393
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanococcus vannielii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanococcus vannielii / qualifier | |||||||
16S Identity %: 74.41700960219478
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| Property / Comparison to close relatives: Methanococcus vannielii / qualifier | |||||||
POCPu: 2.2108843537414966
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| Property / Comparison to close relatives: Methanococcus vannielii / qualifier | |||||||
G+C Difference (%): 2.6499999999999986
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanotorris formicicus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanotorris formicicus / qualifier | |||||||
16S Identity %: 74.38356164383562
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| Property / Comparison to close relatives: Methanotorris formicicus / qualifier | |||||||
POCPu: 2.9486366518706406
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| Property / Comparison to close relatives: Methanotorris formicicus / qualifier | |||||||
G+C Difference (%): 1.5399999999999991
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobacterium ivanovii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobacterium ivanovii / qualifier | |||||||
16S Identity %: 74.34069850320742
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanothermobacter defluvii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanothermobacter defluvii / qualifier | |||||||
16S Identity %: 74.33192686357243
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobrevibacter ruminantium / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobrevibacter ruminantium / qualifier | |||||||
16S Identity %: 74.31578947368422
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| Property / Comparison to close relatives: Methanobrevibacter ruminantium / qualifier | |||||||
POCPu: 1.9451812555260832
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| Property / Comparison to close relatives: Methanobrevibacter ruminantium / qualifier | |||||||
G+C Difference (%): 1.3399999999999963
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanotorris igneus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanotorris igneus / qualifier | |||||||
16S Identity %: 74.24657534246575
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| Property / Comparison to close relatives: Methanotorris igneus / qualifier | |||||||
POCPu: 3.4151193633952257
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| Property / Comparison to close relatives: Methanotorris igneus / qualifier | |||||||
G+C Difference (%): 1.6799999999999997
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanoculleus marisnigri / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanoculleus marisnigri / qualifier | |||||||
16S Identity %: 74.05628002745367
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| Property / Comparison to close relatives: Methanoculleus marisnigri / qualifier | |||||||
POCPu: 2.0136054421768708
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| Property / Comparison to close relatives: Methanoculleus marisnigri / qualifier | |||||||
G+C Difference (%): 28.080000000000005
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanococcoides orientis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanococcoides orientis / qualifier | |||||||
16S Identity %: 73.93980848153214
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| Property / Comparison to close relatives: Methanococcoides orientis / qualifier | |||||||
POCPu: 2.6175063326766113
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| Property / Comparison to close relatives: Methanococcoides orientis / qualifier | |||||||
G+C Difference (%): 8.700000000000003
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanoregula boonei / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanoregula boonei / qualifier | |||||||
16S Identity %: 73.9221140472879
| |||||||
| Property / Comparison to close relatives: Methanoregula boonei / qualifier | |||||||
POCPu: 1.5583019881783988
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| Property / Comparison to close relatives: Methanoregula boonei / qualifier | |||||||
G+C Difference (%): 20.53
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanosphaerula palustris / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanosphaerula palustris / qualifier | |||||||
16S Identity %: 73.8831615120275
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| Property / Comparison to close relatives: Methanosphaerula palustris / qualifier | |||||||
POCPu: 1.6108733954190788
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| Property / Comparison to close relatives: Methanosphaerula palustris / qualifier | |||||||
G+C Difference (%): 21.370000000000005
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanococcoides burtonii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanococcoides burtonii / qualifier | |||||||
16S Identity %: 73.85352498288843
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| Property / Comparison to close relatives: Methanococcoides burtonii / qualifier | |||||||
POCPu: 2.44158571803623
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| Property / Comparison to close relatives: Methanococcoides burtonii / qualifier | |||||||
G+C Difference (%): 6.780000000000001
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanothermobacter wolfeii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanothermobacter wolfeii / qualifier | |||||||
POCPu: 2.697368421052632
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| Property / Comparison to close relatives: Methanothermobacter wolfeii / qualifier | |||||||
G+C Difference (%): 14.690000000000005
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| Property / CAZyme | |||||||
| Property / CAZyme: GH28 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH28 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH57 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH57 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GH0 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH0 / qualifier | |||||||
Occurance: 2
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| Property / CAZyme | |||||||
| Property / CAZyme: GT13 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT13 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT66 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT66 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT3 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT3 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT2 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT2 / qualifier | |||||||
Occurance: 7
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT4 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT4 / qualifier | |||||||
Occurance: 5
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT9 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT9 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT81 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT81 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT1 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT1 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: CE14 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CE14 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: CBM50 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM50 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: CBM13 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM13 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM48 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM48 / qualifier | |||||||
Occurance: 1
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| Property / Pathway | |||||||
| Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man / rank | |||||||
Normal rank | |||||||
| Property / Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Mannose degradation / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Mannose degradation / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Pyruvate:ferredoxin oxidoreductase / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Pyruvate:ferredoxin oxidoreductase / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Lactate production / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Lactate production / qualifier | |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: insect gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: mouse gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human vaginal metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: freshwater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: coral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: coral metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: coral metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: pig gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: chicken gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: marine metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine metagenome / qualifier | |||||||
Prevalence (%): 0.4
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| Property / Ecosystem: marine metagenome / qualifier | |||||||
Relative abundance (%): 0.01
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| Property / Ecosystem | |||||||
| Property / Ecosystem: plant metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: plant metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: plant metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: soil metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: soil metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: soil metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human oral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: activated sludge metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: wastewater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: rhizosphere metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: marine sediment metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Prevalence (%): 0.6
| |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Relative abundance (%): 0.01
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human lung metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: bovine gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human skin metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / MAGs | |||||||
| Property / MAGs: no MAG matches found / rank | |||||||
Normal rank | |||||||
Latest revision as of 10:45, 19 August 2026
genome assembly
| Language | Label | Description | Also known as |
|---|---|---|---|
| default for all languages | No label defined |
||
| English | GCA_018653365.1 |
genome assembly |
Statements
no current description - please contribute here
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2.697368421052632
14.690000000000005
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