GCA_002074035.1 (Q49538): Difference between revisions
Appearance
Added qualifier: 16S Identity % (P3): 23.54859752120026 |
Created claim: MAGs (P28): no MAG matches found (Q42716) |
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| (167 intermediate revisions by the same user not shown) | |||||||
| Property / Comparison to close relatives: Pectobacterium versatile / qualifier | |||||||
POCPu: 8.786008230452675
| |||||||
| Property / Comparison to close relatives: Pectobacterium versatile / qualifier | |||||||
G+C Difference (%): 26.830000000000002
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Providencia vermicola / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Providencia vermicola / qualifier | |||||||
16S Identity %: 23.490813648293962
| |||||||
| Property / Comparison to close relatives: Providencia vermicola / qualifier | |||||||
POCPu: 11.447492904446547
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| Property / Comparison to close relatives: Providencia vermicola / qualifier | |||||||
G+C Difference (%): 16.040000000000003
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Providencia alcalifaciens / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Providencia alcalifaciens / qualifier | |||||||
16S Identity %: 23.464052287581698
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| Property / Comparison to close relatives: Providencia alcalifaciens / qualifier | |||||||
POCPu: 11.13455227379278
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| Property / Comparison to close relatives: Providencia alcalifaciens / qualifier | |||||||
G+C Difference (%): 16.780000000000005
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Symbiopectobacterium purcellii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Symbiopectobacterium purcellii / qualifier | |||||||
16S Identity %: 23.418134377038484
| |||||||
| Property / Comparison to close relatives: Symbiopectobacterium purcellii / qualifier | |||||||
POCPu: 7.926479035037334
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| Property / Comparison to close relatives: Symbiopectobacterium purcellii / qualifier | |||||||
G+C Difference (%): 27.48
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Pectobacterium actinidiae / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Pectobacterium actinidiae / qualifier | |||||||
16S Identity %: 23.2527759634226
| |||||||
| Property / Comparison to close relatives: Pectobacterium actinidiae / qualifier | |||||||
POCPu: 9.140806417563859
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| Property / Comparison to close relatives: Pectobacterium actinidiae / qualifier | |||||||
G+C Difference (%): 26.48
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Enterobacter quasihormaechei / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Enterobacter quasihormaechei / qualifier | |||||||
16S Identity %: 23.222439660795825
| |||||||
| Property / Comparison to close relatives: Enterobacter quasihormaechei / qualifier | |||||||
POCPu: 8.621801763061706
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| Property / Comparison to close relatives: Enterobacter quasihormaechei / qualifier | |||||||
G+C Difference (%): 30.849999999999998
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Providencia rettgeri / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Providencia rettgeri / qualifier | |||||||
16S Identity %: 23.204787234042552
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| Property / Comparison to close relatives: Providencia rettgeri / qualifier | |||||||
POCPu: 9.828152152925275
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| Property / Comparison to close relatives: Providencia rettgeri / qualifier | |||||||
G+C Difference (%): 15.390000000000004
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Providencia manganoxydans / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Providencia manganoxydans / qualifier | |||||||
16S Identity %: 23.202614379084967
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| Property / Comparison to close relatives: Providencia manganoxydans / qualifier | |||||||
POCPu: 10.978684391473758
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| Property / Comparison to close relatives: Providencia manganoxydans / qualifier | |||||||
G+C Difference (%): 15.120000000000001
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Pectobacterium aroidearum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Pectobacterium aroidearum / qualifier | |||||||
16S Identity %: 23.202614379084967
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| Property / Comparison to close relatives: Pectobacterium aroidearum / qualifier | |||||||
POCPu: 8.438654481819949
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| Property / Comparison to close relatives: Pectobacterium aroidearum / qualifier | |||||||
G+C Difference (%): 26.56
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Enterobacter soli / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Enterobacter soli / qualifier | |||||||
16S Identity %: 23.041775456919062
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| Property / Comparison to close relatives: Enterobacter soli / qualifier | |||||||
POCPu: 7.836990595611286
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| Property / Comparison to close relatives: Enterobacter soli / qualifier | |||||||
G+C Difference (%): 28.7
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Huaxiibacter chinensis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Huaxiibacter chinensis / qualifier | |||||||
16S Identity %: 22.97650130548303
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| Property / Comparison to close relatives: Huaxiibacter chinensis / qualifier | |||||||
POCPu: 7.782927771340285
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| Property / Comparison to close relatives: Huaxiibacter chinensis / qualifier | |||||||
G+C Difference (%): 28.66
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Raoultella ornithinolytica / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Raoultella ornithinolytica / qualifier | |||||||
16S Identity %: 22.969374167776298
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| Property / Comparison to close relatives: Raoultella ornithinolytica / qualifier | |||||||
POCPu: 7.426008968609866
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| Property / Comparison to close relatives: Raoultella ornithinolytica / qualifier | |||||||
G+C Difference (%): 30.59
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Yersinia rohdei / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Yersinia rohdei / qualifier | |||||||
16S Identity %: 22.840314136125656
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| Property / Comparison to close relatives: Yersinia rohdei / qualifier | |||||||
POCPu: 9.889593610523843
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| Property / Comparison to close relatives: Yersinia rohdei / qualifier | |||||||
G+C Difference (%): 21.91
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Klebsiella pasteurii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Klebsiella pasteurii / qualifier | |||||||
16S Identity %: 22.7509778357236
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Kluyvera ascorbata / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Kluyvera ascorbata / qualifier | |||||||
16S Identity %: 22.55541069100391
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| Property / Comparison to close relatives: Kluyvera ascorbata / qualifier | |||||||
POCPu: 7.881289308176101
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| Property / Comparison to close relatives: Kluyvera ascorbata / qualifier | |||||||
G+C Difference (%): 29.280000000000005
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Klebsiella spallanzanii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Klebsiella spallanzanii / qualifier | |||||||
16S Identity %: 22.42503259452412
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| Property / Comparison to close relatives: Klebsiella spallanzanii / qualifier | |||||||
POCPu: 6.618589743589744
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| Property / Comparison to close relatives: Klebsiella spallanzanii / qualifier | |||||||
G+C Difference (%): 28.24
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Citrobacter meridianamericanus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Citrobacter meridianamericanus / qualifier | |||||||
16S Identity %: 22.41042345276873
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Scandinavium goeteborgense / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Scandinavium goeteborgense / qualifier | |||||||
16S Identity %: 22.41042345276873
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| Property / Comparison to close relatives: Scandinavium goeteborgense / qualifier | |||||||
POCPu: 8.29417773237998
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| Property / Comparison to close relatives: Scandinavium goeteborgense / qualifier | |||||||
G+C Difference (%): 29.26
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Pseudocitrobacter vendiensis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Pseudocitrobacter vendiensis / qualifier | |||||||
16S Identity %: 22.34527687296417
| |||||||
| Property / Comparison to close relatives: Pseudocitrobacter vendiensis / qualifier | |||||||
POCPu: 7.285714285714286
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| Property / Comparison to close relatives: Pseudocitrobacter vendiensis / qualifier | |||||||
G+C Difference (%): 28.09
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Serratia liquefaciens / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Serratia liquefaciens / qualifier | |||||||
16S Identity %: 21.758957654723126
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| Property / Comparison to close relatives: Serratia liquefaciens / qualifier | |||||||
POCPu: 7.8775434011573635
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| Property / Comparison to close relatives: Serratia liquefaciens / qualifier | |||||||
G+C Difference (%): 30.27
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Yersinia canariae / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Yersinia canariae / qualifier | |||||||
16S Identity %: 21.693811074918568
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| Property / Comparison to close relatives: Yersinia canariae / qualifier | |||||||
POCPu: 9.38034188034188
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| Property / Comparison to close relatives: Yersinia canariae / qualifier | |||||||
G+C Difference (%): 22.110000000000003
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Pectobacterium carotovorum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Pectobacterium carotovorum / qualifier | |||||||
POCPu: 9.177617634590929
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| Property / Comparison to close relatives: Pectobacterium carotovorum / qualifier | |||||||
G+C Difference (%): 26.84
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Photorhabdus heterorhabditis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Photorhabdus heterorhabditis / qualifier | |||||||
POCPu: 9.333333333333334
| |||||||
| Property / Comparison to close relatives: Photorhabdus heterorhabditis / qualifier | |||||||
G+C Difference (%): 17.169999999999998
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH13 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH13 / qualifier | |||||||
Occurance: 2
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH6 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH6 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH23 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH23 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT13 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT13 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT22 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT22 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT4 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT4 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT32 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT32 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT28 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT28 / qualifier | |||||||
Occurance: 3
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT2 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT2 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT19 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT19 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CE11 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CE11 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM13 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM13 / qualifier | |||||||
Occurance: 3
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM50 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM50 / qualifier | |||||||
Occurance: 4
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: insect gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: mouse gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human vaginal metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: freshwater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: coral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: coral metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: coral metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: pig gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: chicken gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: marine metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: marine metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: plant metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: plant metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: plant metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: soil metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: soil metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: soil metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human oral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: activated sludge metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: wastewater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: rhizosphere metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: marine sediment metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human lung metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: bovine gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human skin metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / MAGs | |||||||
| Property / MAGs: no MAG matches found / rank | |||||||
Normal rank | |||||||
Latest revision as of 14:14, 23 July 2026
genome assembly
| Language | Label | Description | Also known as |
|---|---|---|---|
| default for all languages | No label defined |
||
| English | GCA_002074035.1 |
genome assembly |
Statements
no current description - please contribute here
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9.333333333333334
17.169999999999998
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