GCF_000019805.1 (Q42676): Difference between revisions
Appearance
Added qualifier: 16S Identity % (P3): 87.1662360034453 |
Added qualifier: Relative abundance (%) (P19): 0.02 |
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| (206 intermediate revisions by the same user not shown) | |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Aeropyrum camini / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Aeropyrum camini / qualifier | |||||||
16S Identity %: 87.08010335917312
| |||||||
| Property / Comparison to close relatives: Aeropyrum camini / qualifier | |||||||
POCPu: 24.13605442176871
| |||||||
| Property / Comparison to close relatives: Aeropyrum camini / qualifier | |||||||
G+C Difference (%): 56.73
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Pyrolobus fumarii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Pyrolobus fumarii / qualifier | |||||||
16S Identity %: 87.05473501303214
| |||||||
| Property / Comparison to close relatives: Pyrolobus fumarii / qualifier | |||||||
POCPu: 24.52783909737552
| |||||||
| Property / Comparison to close relatives: Pyrolobus fumarii / qualifier | |||||||
G+C Difference (%): 54.9
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Sulfophobococcus zilligii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Sulfophobococcus zilligii / qualifier | |||||||
16S Identity %: 87.04347826086956
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Desulfurococcus mucosus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Desulfurococcus mucosus / qualifier | |||||||
16S Identity %: 86.89655172413792
| |||||||
| Property / Comparison to close relatives: Desulfurococcus mucosus / qualifier | |||||||
POCPu: 22.163588390501317
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| Property / Comparison to close relatives: Desulfurococcus mucosus / qualifier | |||||||
G+C Difference (%): 53.14
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Ignicoccus pacificus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Ignicoccus pacificus / qualifier | |||||||
16S Identity %: 86.75438596491229
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Ignisphaera aggregans / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Ignisphaera aggregans / qualifier | |||||||
16S Identity %: 86.71268334771355
| |||||||
| Property / Comparison to close relatives: Ignisphaera aggregans / qualifier | |||||||
POCPu: 20.2970297029703
| |||||||
| Property / Comparison to close relatives: Ignisphaera aggregans / qualifier | |||||||
G+C Difference (%): 35.69
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Ignicoccus islandicus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Ignicoccus islandicus / qualifier | |||||||
16S Identity %: 86.67247386759583
| |||||||
| Property / Comparison to close relatives: Ignicoccus islandicus / qualifier | |||||||
POCPu: 21.366806136680612
| |||||||
| Property / Comparison to close relatives: Ignicoccus islandicus / qualifier | |||||||
G+C Difference (%): 44.9
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Aeropyrum pernix / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Aeropyrum pernix / qualifier | |||||||
16S Identity %: 86.54012079378775
| |||||||
| Property / Comparison to close relatives: Aeropyrum pernix / qualifier | |||||||
POCPu: 23.75631816972599
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| Property / Comparison to close relatives: Aeropyrum pernix / qualifier | |||||||
G+C Difference (%): 56.31
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Acidilobus aceticus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Acidilobus aceticus / qualifier | |||||||
16S Identity %: 86.46748681898066
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Ignicoccus hospitalis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Ignicoccus hospitalis / qualifier | |||||||
16S Identity %: 86.33594429939077
| |||||||
| Property / Comparison to close relatives: Ignicoccus hospitalis / qualifier | |||||||
POCPu: 22.74787535410765
| |||||||
| Property / Comparison to close relatives: Ignicoccus hospitalis / qualifier | |||||||
G+C Difference (%): 56.52
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Stetteria hydrogenophila / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Stetteria hydrogenophila / qualifier | |||||||
16S Identity %: 86.12099644128114
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Desulfurococcus amylolyticus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Desulfurococcus amylolyticus / qualifier | |||||||
16S Identity %: 86.12068965517241
| |||||||
| Property / Comparison to close relatives: Desulfurococcus amylolyticus / qualifier | |||||||
POCPu: 20.268691588785046
| |||||||
| Property / Comparison to close relatives: Desulfurococcus amylolyticus / qualifier | |||||||
G+C Difference (%): 45.16
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermodiscus maritimus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermodiscus maritimus / qualifier | |||||||
16S Identity %: 85.12685914260717
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Saccharolobus caldissimus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Saccharolobus caldissimus / qualifier | |||||||
16S Identity %: 84.89583333333334
| |||||||
| Property / Comparison to close relatives: Saccharolobus caldissimus / qualifier | |||||||
POCPu: 16.9124509986933
| |||||||
| Property / Comparison to close relatives: Saccharolobus caldissimus / qualifier | |||||||
G+C Difference (%): 32.9
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Sulfurisphaera javensis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Sulfurisphaera javensis / qualifier | |||||||
16S Identity %: 84.72222222222221
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Acidianus infernus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Acidianus infernus / qualifier | |||||||
16S Identity %: 84.43478260869566
| |||||||
| Property / Comparison to close relatives: Acidianus infernus / qualifier | |||||||
POCPu: 19.21017402945114
| |||||||
| Property / Comparison to close relatives: Acidianus infernus / qualifier | |||||||
G+C Difference (%): 34.36
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Sulfurisphaera ohwakuensis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Sulfurisphaera ohwakuensis / qualifier | |||||||
16S Identity %: 84.38308886971527
| |||||||
| Property / Comparison to close relatives: Sulfurisphaera ohwakuensis / qualifier | |||||||
POCPu: 17.82976213878514
| |||||||
| Property / Comparison to close relatives: Sulfurisphaera ohwakuensis / qualifier | |||||||
G+C Difference (%): 32.75
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Sulfurisphaera tokodaii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Sulfurisphaera tokodaii / qualifier | |||||||
16S Identity %: 84.3103448275862
| |||||||
| Property / Comparison to close relatives: Sulfurisphaera tokodaii / qualifier | |||||||
POCPu: 17.796274276654774
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| Property / Comparison to close relatives: Sulfurisphaera tokodaii / qualifier | |||||||
G+C Difference (%): 32.79
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Acidianus ambivalens / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Acidianus ambivalens / qualifier | |||||||
16S Identity %: 84.07310704960835
| |||||||
| Property / Comparison to close relatives: Acidianus ambivalens / qualifier | |||||||
POCPu: 18.028589716236397
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| Property / Comparison to close relatives: Acidianus ambivalens / qualifier | |||||||
G+C Difference (%): 34.23
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Stygiolobus azoricus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Stygiolobus azoricus / qualifier | |||||||
16S Identity %: 83.91304347826087
| |||||||
| Property / Comparison to close relatives: Stygiolobus azoricus / qualifier | |||||||
POCPu: 19.697685403873404
| |||||||
| Property / Comparison to close relatives: Stygiolobus azoricus / qualifier | |||||||
G+C Difference (%): 37.61
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Sulfolobus yangmingensis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Sulfolobus yangmingensis / qualifier | |||||||
16S Identity %: 83.87931034482759
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Sulfolobus acidocaldarius / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Sulfolobus acidocaldarius / qualifier | |||||||
16S Identity %: 83.87931034482759
| |||||||
| Property / Comparison to close relatives: Sulfolobus acidocaldarius / qualifier | |||||||
POCPu: 18.175614194722474
| |||||||
| Property / Comparison to close relatives: Sulfolobus acidocaldarius / qualifier | |||||||
G+C Difference (%): 36.71
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Saccharolobus shibatae / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Saccharolobus shibatae / qualifier | |||||||
16S Identity %: 83.69283865401208
| |||||||
| Property / Comparison to close relatives: Saccharolobus shibatae / qualifier | |||||||
POCPu: 16.48098348059931
| |||||||
| Property / Comparison to close relatives: Saccharolobus shibatae / qualifier | |||||||
G+C Difference (%): 35.36
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Saccharolobus solfataricus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Saccharolobus solfataricus / qualifier | |||||||
16S Identity %: 83.69283865401208
| |||||||
| Property / Comparison to close relatives: Saccharolobus solfataricus / qualifier | |||||||
POCPu: 16.45852749301025
| |||||||
| Property / Comparison to close relatives: Saccharolobus solfataricus / qualifier | |||||||
G+C Difference (%): 35.84
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH57 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH57 / qualifier | |||||||
Occurance: 2
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH77 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH77 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH0 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH0 / qualifier | |||||||
Occurance: 4
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH1 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH1 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT2 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT2 / qualifier | |||||||
Occurance: 17
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT4 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT4 / qualifier | |||||||
Occurance: 8
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT20 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT20 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT0 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT0 / qualifier | |||||||
Occurance: 2
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT5 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT5 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT35 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT35 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT66 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT66 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT7 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT7 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CE4 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CE4 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM50 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM50 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / Pathway | |||||||
| Property / Pathway: mannose degradation / rank | |||||||
Normal rank | |||||||
| Property / Pathway: mannose degradation / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: methionine degradation i / rank | |||||||
Normal rank | |||||||
| Property / Pathway: methionine degradation i / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: pyruvate:ferredoxin oxidoreductase / rank | |||||||
Normal rank | |||||||
| Property / Pathway: pyruvate:ferredoxin oxidoreductase / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: acetate to acetyl-coa / rank | |||||||
Normal rank | |||||||
| Property / Pathway: acetate to acetyl-coa / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: acetyl-coa to crotonyl-coa / rank | |||||||
Normal rank | |||||||
| Property / Pathway: acetyl-coa to crotonyl-coa / qualifier | |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: Wastewater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: Wastewater metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: Wastewater metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: Human lung metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: Human lung metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: Human lung metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: Chicken gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: Chicken gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: Chicken gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: Bovine gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: Bovine gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: Bovine gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: Human oral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: Human oral metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: Human oral metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: Human vaginal metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: Human vaginal metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: Human vaginal metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: Rhizosphere metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: Rhizosphere metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: Rhizosphere metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: Pig gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: Pig gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: Soil metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: Soil metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: Soil metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: Mouse gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: Mouse gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: Mouse gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: Coral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: Coral metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: Coral metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: Human skin metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: Human gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: Human gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: Human gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: Marine metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: Marine metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: Marine metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: Activated sludge metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: Activated sludge metagenome / qualifier | |||||||
Prevalence (%): 0.1
| |||||||
| Property / Ecosystem: Activated sludge metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: Freshwater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: Freshwater metagenome / qualifier | |||||||
Prevalence (%): 0.1
| |||||||
| Property / Ecosystem: Freshwater metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: Marine sediment metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: Marine sediment metagenome / qualifier | |||||||
Prevalence (%): 0.1
| |||||||
| Property / Ecosystem: Marine sediment metagenome / qualifier | |||||||
Relative abundance (%): 0.01
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: Insect gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: Insect gut metagenome / qualifier | |||||||
Prevalence (%): 0.1
| |||||||
| Property / Ecosystem: Insect gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: Plant metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: Plant metagenome / qualifier | |||||||
Prevalence (%): 1.1
| |||||||
| Property / Ecosystem: Plant metagenome / qualifier | |||||||
Relative abundance (%): 0.02
| |||||||
| Property / Carbon source | |||||||
| Property / Carbon source: starch / rank | |||||||
Normal rank | |||||||
| Property / MAGs | |||||||
| Property / MAGs: no MAG matches found / rank | |||||||
Normal rank | |||||||
Latest revision as of 14:05, 30 June 2026
genome assembly
| Language | Label | Description | Also known as |
|---|---|---|---|
| default for all languages | No label defined |
||
| English | GCF_000019805.1 |
genome assembly |
Statements
no current description - please contribute here
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