GCA_018304465.1 (Q180734): Difference between revisions
Appearance
Added qualifier: 16S Identity % (P3): 23.636363636363637 |
Created claim: MAGs (P28): no MAG matches found (Q42716) |
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanothermobacter crinale / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanothermobacter crinale / qualifier | |||||||
16S Identity %: 23.59472588480222
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobacterium formicicum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobacterium formicicum / qualifier | |||||||
16S Identity %: 23.555230431602048
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| Property / Comparison to close relatives: Methanobacterium formicicum / qualifier | |||||||
POCPu: 2.433688815969374
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| Property / Comparison to close relatives: Methanobacterium formicicum / qualifier | |||||||
G+C Difference (%): 6.5
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobacterium alkalithermotolerans / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobacterium alkalithermotolerans / qualifier | |||||||
16S Identity %: 23.47972972972973
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| Property / Comparison to close relatives: Methanobacterium alkalithermotolerans / qualifier | |||||||
POCPu: 2.6231419411250365
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| Property / Comparison to close relatives: Methanobacterium alkalithermotolerans / qualifier | |||||||
G+C Difference (%): 11.519999999999996
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobrevibacter arboriphilus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobrevibacter arboriphilus / qualifier | |||||||
16S Identity %: 23.426294820717132
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| Property / Comparison to close relatives: Methanobrevibacter arboriphilus / qualifier | |||||||
POCPu: 1.9553072625698324
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| Property / Comparison to close relatives: Methanobrevibacter arboriphilus / qualifier | |||||||
G+C Difference (%): 22.429999999999996
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobacterium espanolae / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobacterium espanolae / qualifier | |||||||
16S Identity %: 23.342736248236953
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobrevibacter filiformis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobrevibacter filiformis / qualifier | |||||||
16S Identity %: 23.28159645232816
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| Property / Comparison to close relatives: Methanobrevibacter filiformis / qualifier | |||||||
POCPu: 2.054794520547945
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| Property / Comparison to close relatives: Methanobrevibacter filiformis / qualifier | |||||||
G+C Difference (%): 20.88
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanothermobacter tenebrarum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanothermobacter tenebrarum / qualifier | |||||||
16S Identity %: 23.076923076923077
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| Property / Comparison to close relatives: Methanothermobacter tenebrarum / qualifier | |||||||
POCPu: 3.0386740331491713
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| Property / Comparison to close relatives: Methanothermobacter tenebrarum / qualifier | |||||||
G+C Difference (%): 5.82
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobacterium aarhusense / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobacterium aarhusense / qualifier | |||||||
16S Identity %: 22.978080120937264
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobrevibacter woesei / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobrevibacter woesei / qualifier | |||||||
16S Identity %: 22.532027128862094
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| Property / Comparison to close relatives: Methanobrevibacter woesei / qualifier | |||||||
POCPu: 2.2058823529411766
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| Property / Comparison to close relatives: Methanobrevibacter woesei / qualifier | |||||||
G+C Difference (%): 17.97
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobacterium palustre / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobacterium palustre / qualifier | |||||||
16S Identity %: 22.507122507122507
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobrevibacter wolinii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobrevibacter wolinii / qualifier | |||||||
16S Identity %: 21.902654867256636
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| Property / Comparison to close relatives: Methanobrevibacter wolinii / qualifier | |||||||
POCPu: 2.093887200270179
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| Property / Comparison to close relatives: Methanobrevibacter wolinii / qualifier | |||||||
G+C Difference (%): 23.699999999999996
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| Property / CAZyme | |||||||
| Property / CAZyme: GH51 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH51 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GH28 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH28 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GH13 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH13 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GH0 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH0 / qualifier | |||||||
Occurance: 3
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| Property / CAZyme | |||||||
| Property / CAZyme: GH130 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH130 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GH16 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH16 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT2 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT2 / qualifier | |||||||
Occurance: 18
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| Property / CAZyme | |||||||
| Property / CAZyme: GT4 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT4 / qualifier | |||||||
Occurance: 8
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| Property / CAZyme | |||||||
| Property / CAZyme: GT66 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT66 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT81 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT81 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT1 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT1 / qualifier | |||||||
Occurance: 2
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| Property / CAZyme | |||||||
| Property / CAZyme: PL0 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: PL0 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: CE4 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CE4 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: CBM50 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM50 / qualifier | |||||||
Occurance: 3
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| Property / CAZyme | |||||||
| Property / CAZyme: CBM32 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM32 / qualifier | |||||||
Occurance: 1
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| Property / Pathway | |||||||
| Property / Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc / rank | |||||||
Normal rank | |||||||
| Property / Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man / rank | |||||||
Normal rank | |||||||
| Property / Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Arabinoxylan degradation / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Arabinoxylan degradation / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Mannose degradation / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Mannose degradation / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Pyruvate:ferredoxin oxidoreductase / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Pyruvate:ferredoxin oxidoreductase / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Lactate production / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Lactate production / qualifier | |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: insect gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: mouse gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human vaginal metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: freshwater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Prevalence (%): 0.3
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| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: coral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: coral metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: coral metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: pig gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: chicken gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: marine metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine metagenome / qualifier | |||||||
Prevalence (%): 0.1
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| Property / Ecosystem: marine metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: plant metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: plant metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: plant metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: soil metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: soil metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: soil metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human oral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: activated sludge metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: wastewater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Prevalence (%): 0.3
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| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Relative abundance (%): 0.01
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| Property / Ecosystem | |||||||
| Property / Ecosystem: rhizosphere metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: marine sediment metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human lung metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: bovine gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human skin metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / MAGs | |||||||
| Property / MAGs: no MAG matches found / rank | |||||||
Normal rank | |||||||
Latest revision as of 01:50, 19 August 2026
genome assembly
| Language | Label | Description | Also known as |
|---|---|---|---|
| default for all languages | No label defined |
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| English | GCA_018304465.1 |
genome assembly |
Statements
no current description - please contribute here
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