Jump to content

GCA_018304045.1 (Q180465): Difference between revisions

From wikibase
Created a new Item
 
 
(129 intermediate revisions by the same user not shown)
Property / Protologue of the species
 
no current description - please contribute here
Property / Protologue of the species: no current description - please contribute here / rank
 
Normal rank
Property / Instance of
 
Property / Instance of: Genome Assembly Accession / rank
 
Normal rank
Property / GTDB
 
Property / GTDB: Archaea / rank
 
Normal rank
Property / GTDB: Archaea / qualifier
 
Property / GTDB: Archaea / qualifier
 
Property / GTDB: Archaea / qualifier
 
Property / GTDB: Archaea / qualifier
 
Property / GTDB: Archaea / qualifier
 
Property / GTDB: Archaea / qualifier
 
Property / GTDB: Archaea / qualifier
 
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Halarchaeum nitratireducens / rank
 
Normal rank
Property / Comparison to close relatives: Halarchaeum nitratireducens / qualifier
 
16S Identity %: 24.094707520891365
Amount24.094707520891365
Unit1
Property / Comparison to close relatives: Halarchaeum nitratireducens / qualifier
 
POCPu: 0.2190100744634253
Amount0.2190100744634253
Unit1
Property / Comparison to close relatives: Halarchaeum nitratireducens / qualifier
 
G+C Difference (%): 38.07
Amount38.07
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Halarchaeum solikamskense / rank
 
Normal rank
Property / Comparison to close relatives: Halarchaeum solikamskense / qualifier
 
16S Identity %: 23.68794326241135
Amount23.68794326241135
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosalsum natronophilum / rank
 
Normal rank
Property / Comparison to close relatives: Methanosalsum natronophilum / qualifier
 
16S Identity %: 23.224431818181817
Amount23.224431818181817
Unit1
Property / Comparison to close relatives: Methanosalsum natronophilum / qualifier
 
POCPu: 1.1137868753762794
Amount1.1137868753762794
Unit1
Property / Comparison to close relatives: Methanosalsum natronophilum / qualifier
 
G+C Difference (%): 5.190000000000005
Amount5.190000000000005
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Haloarcula salaria / rank
 
Normal rank
Property / Comparison to close relatives: Haloarcula salaria / qualifier
 
16S Identity %: 22.926829268292686
Amount22.926829268292686
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanomicrobium mobile / rank
 
Normal rank
Property / Comparison to close relatives: Methanomicrobium mobile / qualifier
 
16S Identity %: 22.717770034843205
Amount22.717770034843205
Unit1
Property / Comparison to close relatives: Methanomicrobium mobile / qualifier
 
POCPu: 0.739247311827957
Amount0.739247311827957
Unit1
Property / Comparison to close relatives: Methanomicrobium mobile / qualifier
 
G+C Difference (%): 20.310000000000002
Amount20.310000000000002
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Haloarcula argentinensis / rank
 
Normal rank
Property / Comparison to close relatives: Haloarcula argentinensis / qualifier
 
16S Identity %: 21.951219512195124
Amount21.951219512195124
Unit1
Property / Comparison to close relatives: Haloarcula argentinensis / qualifier
 
POCPu: 0.24946543121881684
Amount0.24946543121881684
Unit1
Property / Comparison to close relatives: Haloarcula argentinensis / qualifier
 
G+C Difference (%): 31.97
Amount31.97
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Haloarcula amylolytica / rank
 
Normal rank
Property / Comparison to close relatives: Haloarcula amylolytica / qualifier
 
16S Identity %: 21.951219512195124
Amount21.951219512195124
Unit1
Property / Comparison to close relatives: Haloarcula amylolytica / qualifier
 
POCPu: 0.24827097003014717
Amount0.24827097003014717
Unit1
Property / Comparison to close relatives: Haloarcula amylolytica / qualifier
 
G+C Difference (%): 32.97
Amount32.97
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Haloarcula quadrata / rank
 
Normal rank
Property / Comparison to close relatives: Haloarcula quadrata / qualifier
 
16S Identity %: 21.881533101045296
Amount21.881533101045296
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Haloarcula hispanica / rank
 
Normal rank
Property / Comparison to close relatives: Haloarcula hispanica / qualifier
 
16S Identity %: 21.881533101045296
Amount21.881533101045296
Unit1
Property / Comparison to close relatives: Haloarcula hispanica / qualifier
 
POCPu: 0.2661596958174905
Amount0.2661596958174905
Unit1
Property / Comparison to close relatives: Haloarcula hispanica / qualifier
 
G+C Difference (%): 33.300000000000004
Amount33.300000000000004
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Haloarcula marismortui / rank
 
Normal rank
Property / Comparison to close relatives: Haloarcula marismortui / qualifier
 
16S Identity %: 21.81184668989547
Amount21.81184668989547
Unit1
Property / Comparison to close relatives: Haloarcula marismortui / qualifier
 
POCPu: 0.24129610479145122
Amount0.24129610479145122
Unit1
Property / Comparison to close relatives: Haloarcula marismortui / qualifier
 
G+C Difference (%): 31.97
Amount31.97
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Haloarcula japonica / rank
 
Normal rank
Property / Comparison to close relatives: Haloarcula japonica / qualifier
 
16S Identity %: 21.81184668989547
Amount21.81184668989547
Unit1
Property / Comparison to close relatives: Haloarcula japonica / qualifier
 
POCPu: 0.24496937882764655
Amount0.24496937882764655
Unit1
Property / Comparison to close relatives: Haloarcula japonica / qualifier
 
G+C Difference (%): 32.03
Amount32.03
Unit1
Property / CAZyme
 
Property / CAZyme: GH23 / rank
 
Normal rank
Property / CAZyme: GH23 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GH105 / rank
 
Normal rank
Property / CAZyme: GH105 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT7 / rank
 
Normal rank
Property / CAZyme: GT7 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT66 / rank
 
Normal rank
Property / CAZyme: GT66 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT2 / rank
 
Normal rank
Property / CAZyme: GT2 / qualifier
 
Occurance: 10
Amount10
Unit1
Property / CAZyme
 
Property / CAZyme: GT4 / rank
 
Normal rank
Property / CAZyme: GT4 / qualifier
 
Occurance: 5
Amount5
Unit1
Property / CAZyme
 
Property / CAZyme: GT9 / rank
 
Normal rank
Property / CAZyme: GT9 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT1 / rank
 
Normal rank
Property / CAZyme: GT1 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: CBM50 / rank
 
Normal rank
Property / CAZyme: CBM50 / qualifier
 
Occurance: 4
Amount4
Unit1
Property / Pathway
 
Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / rank
 
Normal rank
Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / qualifier
 
Property / Pathway
 
Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / rank
 
Normal rank
Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / qualifier
 
Property / Pathway
 
Property / Pathway: GDP-DDmanHep biosynthesis, sedoheptulose-7P => GDP-DDmanHep / rank
 
Normal rank
Property / Pathway: GDP-DDmanHep biosynthesis, sedoheptulose-7P => GDP-DDmanHep / qualifier
 
Property / Ecosystem
 
Property / Ecosystem: insect gut metagenome / rank
 
Normal rank
Property / Ecosystem: insect gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: insect gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: mouse gut metagenome / rank
 
Normal rank
Property / Ecosystem: mouse gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: mouse gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human vaginal metagenome / rank
 
Normal rank
Property / Ecosystem: human vaginal metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human vaginal metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: freshwater metagenome / rank
 
Normal rank
Property / Ecosystem: freshwater metagenome / qualifier
 
Prevalence (%): 4.2
Amount4.2
Unit1
Property / Ecosystem: freshwater metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: coral metagenome / rank
 
Normal rank
Property / Ecosystem: coral metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: coral metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: pig gut metagenome / rank
 
Normal rank
Property / Ecosystem: pig gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: pig gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: chicken gut metagenome / rank
 
Normal rank
Property / Ecosystem: chicken gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: chicken gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine metagenome / rank
 
Normal rank
Property / Ecosystem: marine metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: marine metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: plant metagenome / rank
 
Normal rank
Property / Ecosystem: plant metagenome / qualifier
 
Prevalence (%): 0.1
Amount0.1
Unit1
Property / Ecosystem: plant metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: soil metagenome / rank
 
Normal rank
Property / Ecosystem: soil metagenome / qualifier
 
Prevalence (%): 0.1
Amount0.1
Unit1
Property / Ecosystem: soil metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human oral metagenome / rank
 
Normal rank
Property / Ecosystem: human oral metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human oral metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: activated sludge metagenome / rank
 
Normal rank
Property / Ecosystem: activated sludge metagenome / qualifier
 
Prevalence (%): 0.3
Amount0.3
Unit1
Property / Ecosystem: activated sludge metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: wastewater metagenome / rank
 
Normal rank
Property / Ecosystem: wastewater metagenome / qualifier
 
Prevalence (%): 0.1
Amount0.1
Unit1
Property / Ecosystem: wastewater metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: rhizosphere metagenome / rank
 
Normal rank
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Prevalence (%): 0.3
Amount0.3
Unit1
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine sediment metagenome / rank
 
Normal rank
Property / Ecosystem: marine sediment metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: marine sediment metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human lung metagenome / rank
 
Normal rank
Property / Ecosystem: human lung metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human lung metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: bovine gut metagenome / rank
 
Normal rank
Property / Ecosystem: bovine gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: bovine gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human skin metagenome / rank
 
Normal rank
Property / Ecosystem: human skin metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human skin metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human gut metagenome / rank
 
Normal rank
Property / Ecosystem: human gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / MAGs
 
Property / MAGs: no MAG matches found / rank
 
Normal rank

Latest revision as of 01:19, 19 August 2026

genome assembly
Language Label Description Also known as
default for all languages
No label defined
    English
    GCA_018304045.1
    genome assembly

      Statements

      no current description - please contribute here
      0 references
      24.094707520891365
      0.2190100744634253
      0 references
      0 references
      23.224431818181817
      1.1137868753762794
      5.190000000000005
      0 references
      22.926829268292686
      0 references
      22.717770034843205
      0.739247311827957
      20.310000000000002
      0 references
      21.951219512195124
      0.24946543121881684
      0 references
      21.951219512195124
      0.24827097003014717
      0 references
      21.881533101045296
      0 references
      21.881533101045296
      0.2661596958174905
      33.300000000000004
      0 references
      21.81184668989547
      0.24129610479145122
      0 references
      21.81184668989547
      0.24496937882764655
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references