Jump to content

GCA_018302235.1 (Q179988): Difference between revisions

Add links
From wikibase
← Older edit
Admin (talk | contribs)
Bots, Bureaucrats, Interface administrators, Administrators
4,875,322 edits
‎Added qualifier: 16S Identity % (P3): 23.157162726008345
 
(125 intermediate revisions by the same user not shown)
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanococcus vannielii / rank
 
Normal rank
Property / Comparison to close relatives: Methanococcus vannielii / qualifier
 
16S Identity %: 23.15068493150685
Amount23.15068493150685
Unit1
Property / Comparison to close relatives: Methanococcus vannielii / qualifier
 
POCPu: 2.3639774859287055
Amount2.3639774859287055
Unit1
Property / Comparison to close relatives: Methanococcus vannielii / qualifier
 
G+C Difference (%): 3.379999999999999
Amount3.379999999999999
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanothermococcus thermolithotrophicus / rank
 
Normal rank
Property / Comparison to close relatives: Methanothermococcus thermolithotrophicus / qualifier
 
16S Identity %: 23.002754820936637
Amount23.002754820936637
Unit1
Property / Comparison to close relatives: Methanothermococcus thermolithotrophicus / qualifier
 
POCPu: 2.802303262955854
Amount2.802303262955854
Unit1
Property / Comparison to close relatives: Methanothermococcus thermolithotrophicus / qualifier
 
G+C Difference (%): 4.940000000000001
Amount4.940000000000001
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanocaldococcus vulcanius / rank
 
Normal rank
Property / Comparison to close relatives: Methanocaldococcus vulcanius / qualifier
 
16S Identity %: 22.93577981651376
Amount22.93577981651376
Unit1
Property / Comparison to close relatives: Methanocaldococcus vulcanius / qualifier
 
POCPu: 2.3507462686567164
Amount2.3507462686567164
Unit1
Property / Comparison to close relatives: Methanocaldococcus vulcanius / qualifier
 
G+C Difference (%): 3.629999999999999
Amount3.629999999999999
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium aarhusense / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium aarhusense / qualifier
 
16S Identity %: 22.81226626776365
Amount22.81226626776365
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobrevibacter acididurans / rank
 
Normal rank
Property / Comparison to close relatives: Methanobrevibacter acididurans / qualifier
 
16S Identity %: 22.744220730797913
Amount22.744220730797913
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium flexile / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium flexile / qualifier
 
16S Identity %: 22.67037552155772
Amount22.67037552155772
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium kanagiense / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium kanagiense / qualifier
 
16S Identity %: 22.542955326460483
Amount22.542955326460483
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanotorris formicicus / rank
 
Normal rank
Property / Comparison to close relatives: Methanotorris formicicus / qualifier
 
16S Identity %: 22.28298017771702
Amount22.28298017771702
Unit1
Property / Comparison to close relatives: Methanotorris formicicus / qualifier
 
POCPu: 2.6398054880166724
Amount2.6398054880166724
Unit1
Property / Comparison to close relatives: Methanotorris formicicus / qualifier
 
G+C Difference (%): 4.489999999999998
Amount4.489999999999998
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanothermococcus okinawensis / rank
 
Normal rank
Property / Comparison to close relatives: Methanothermococcus okinawensis / qualifier
 
16S Identity %: 22.214627477785374
Amount22.214627477785374
Unit1
Property / Comparison to close relatives: Methanothermococcus okinawensis / qualifier
 
POCPu: 2.825077399380805
Amount2.825077399380805
Unit1
Property / Comparison to close relatives: Methanothermococcus okinawensis / qualifier
 
G+C Difference (%): 1.3300000000000018
Amount1.3300000000000018
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium alkalithermotolerans / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium alkalithermotolerans / qualifier
 
16S Identity %: 22.157676348547717
Amount22.157676348547717
Unit1
Property / Comparison to close relatives: Methanobacterium alkalithermotolerans / qualifier
 
POCPu: 2.633289986996099
Amount2.633289986996099
Unit1
Property / Comparison to close relatives: Methanobacterium alkalithermotolerans / qualifier
 
G+C Difference (%): 8.400000000000002
Amount8.400000000000002
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanocaldococcus villosus / rank
 
Normal rank
Property / Comparison to close relatives: Methanocaldococcus villosus / qualifier
 
16S Identity %: 22.145804676753784
Amount22.145804676753784
Unit1
Property / Comparison to close relatives: Methanocaldococcus villosus / qualifier
 
POCPu: 2.8297779712668696
Amount2.8297779712668696
Unit1
Property / Comparison to close relatives: Methanocaldococcus villosus / qualifier
 
G+C Difference (%): 1.5500000000000007
Amount1.5500000000000007
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanotorris igneus / rank
 
Normal rank
Property / Comparison to close relatives: Methanotorris igneus / qualifier
 
16S Identity %: 21.85792349726776
Amount21.85792349726776
Unit1
Property / Comparison to close relatives: Methanotorris igneus / qualifier
 
POCPu: 2.7727106895293687
Amount2.7727106895293687
Unit1
Property / Comparison to close relatives: Methanotorris igneus / qualifier
 
G+C Difference (%): 4.349999999999998
Amount4.349999999999998
Unit1
Property / CAZyme
 
Property / CAZyme: GH23 / rank
 
Normal rank
Property / CAZyme: GH23 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GH0 / rank
 
Normal rank
Property / CAZyme: GH0 / qualifier
 
Occurance: 2
Amount2
Unit1
Property / CAZyme
 
Property / CAZyme: GT66 / rank
 
Normal rank
Property / CAZyme: GT66 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT13 / rank
 
Normal rank
Property / CAZyme: GT13 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT4 / rank
 
Normal rank
Property / CAZyme: GT4 / qualifier
 
Occurance: 10
Amount10
Unit1
Property / CAZyme
 
Property / CAZyme: GT2 / rank
 
Normal rank
Property / CAZyme: GT2 / qualifier
 
Occurance: 15
Amount15
Unit1
Property / CAZyme
 
Property / CAZyme: GT1 / rank
 
Normal rank
Property / CAZyme: GT1 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT28 / rank
 
Normal rank
Property / CAZyme: GT28 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT9 / rank
 
Normal rank
Property / CAZyme: GT9 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: CE14 / rank
 
Normal rank
Property / CAZyme: CE14 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: CBM50 / rank
 
Normal rank
Property / CAZyme: CBM50 / qualifier
 
Occurance: 3
Amount3
Unit1
Property / Pathway
 
Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / rank
 
Normal rank
Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / qualifier
 
Property / Pathway
 
Property / Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA / rank
 
Normal rank
Property / Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA / qualifier
 
Property / Pathway
 
Property / Pathway: Pyruvate:ferredoxin oxidoreductase / rank
 
Normal rank
Property / Pathway: Pyruvate:ferredoxin oxidoreductase / qualifier
 
Property / Ecosystem
 
Property / Ecosystem: insect gut metagenome / rank
 
Normal rank
Property / Ecosystem: insect gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: insect gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: mouse gut metagenome / rank
 
Normal rank
Property / Ecosystem: mouse gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: mouse gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human vaginal metagenome / rank
 
Normal rank
Property / Ecosystem: human vaginal metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human vaginal metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: freshwater metagenome / rank
 
Normal rank
Property / Ecosystem: freshwater metagenome / qualifier
 
Prevalence (%): 0.1
Amount0.1
Unit1
Property / Ecosystem: freshwater metagenome / qualifier
 
Relative abundance (%): 0.03
Amount0.03
Unit1
Property / Ecosystem
 
Property / Ecosystem: coral metagenome / rank
 
Normal rank
Property / Ecosystem: coral metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: coral metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: pig gut metagenome / rank
 
Normal rank
Property / Ecosystem: pig gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: pig gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: chicken gut metagenome / rank
 
Normal rank
Property / Ecosystem: chicken gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: chicken gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine metagenome / rank
 
Normal rank
Property / Ecosystem: marine metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: marine metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: plant metagenome / rank
 
Normal rank
Property / Ecosystem: plant metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: plant metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: soil metagenome / rank
 
Normal rank
Property / Ecosystem: soil metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: soil metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human oral metagenome / rank
 
Normal rank
Property / Ecosystem: human oral metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human oral metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: activated sludge metagenome / rank
 
Normal rank
Property / Ecosystem: activated sludge metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: activated sludge metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: wastewater metagenome / rank
 
Normal rank
Property / Ecosystem: wastewater metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: wastewater metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: rhizosphere metagenome / rank
 
Normal rank
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine sediment metagenome / rank
 
Normal rank
Property / Ecosystem: marine sediment metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: marine sediment metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human lung metagenome / rank
 
Normal rank
Property / Ecosystem: human lung metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human lung metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: bovine gut metagenome / rank
 
Normal rank
Property / Ecosystem: bovine gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: bovine gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human skin metagenome / rank
 
Normal rank
Property / Ecosystem: human skin metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human skin metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human gut metagenome / rank
 
Normal rank
Property / Ecosystem: human gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / MAGs
 
Property / MAGs: no MAG matches found / rank
 
Normal rank

Latest revision as of 00:30, 19 August 2026

genome assembly
Language Label Description Also known as
default for all languages
No label defined
    English
    GCA_018302235.1
    genome assembly

      Statements

      Protologue of the species
      no current description - please contribute here
      0 references
      Comparison to close relatives
      Methanobacterium movilense
      16S Identity %
      25.945144551519643
      0 references
      Methanobrevibacter woesei
      16S Identity %
      25.600600600600597
      POCPu
      2.838864454218313
      G+C Difference (%)
      1.9499999999999993
      0 references
      Methanobacterium lacus
      16S Identity %
      25.522388059701495
      POCPu
      1.8308631211857016
      G+C Difference (%)
      7.879999999999999
      0 references
      Methanosphaera stadtmanae
      16S Identity %
      25.40983606557377
      POCPu
      2.144880615135573
      G+C Difference (%)
      0.3200000000000003
      0 references
      Methanobrevibacter arboriphilus
      16S Identity %
      25.375494071146242
      POCPu
      2.267178235088943
      G+C Difference (%)
      2.509999999999998
      0 references
      Methanobrevibacter thaueri
      16S Identity %
      25.275590551181104
      POCPu
      1.8960444589735208
      G+C Difference (%)
      8.919999999999998
      0 references
      Methanobrevibacter filiformis
      16S Identity %
      25.219941348973606
      POCPu
      2.0301015050752538
      G+C Difference (%)
      0.9600000000000009
      0 references
      Methanobrevibacter millerae
      16S Identity %
      25.079113924050635
      POCPu
      2.0072992700729926
      G+C Difference (%)
      8.470000000000002
      0 references
      Methanocaldococcus indicus
      16S Identity %
      24.839857651245552
      0 references
      Methanobrevibacter smithii
      16S Identity %
      24.488403819918144
      POCPu
      2.1489440533530937
      G+C Difference (%)
      3.080000000000002
      0 references
      Methanobacterium arcticum
      16S Identity %
      24.45074415308292
      0 references
      Methanocaldococcus fervens
      16S Identity %
      24.385245901639344
      POCPu
      2.9308323563892147
      G+C Difference (%)
      4.27
      0 references
      Methanocaldococcus infernus
      16S Identity %
      24.385245901639344
      POCPu
      2.7580442958629336
      G+C Difference (%)
      5.669999999999998
      0 references
      Methanobacterium beijingense
      16S Identity %
      24.293785310734464
      0 references
      Methanobacterium ferruginis
      16S Identity %
      24.235963041933193
      POCPu
      1.8441558441558443
      G+C Difference (%)
      9.440000000000001
      0 references
      Methanobacterium paludis
      16S Identity %
      24.23417290673928
      POCPu
      1.9584569732937687
      G+C Difference (%)
      7.779999999999998
      0 references
      Methanobrevibacter cuticularis
      16S Identity %
      24.161585365853657
      POCPu
      2.245308310991957
      G+C Difference (%)
      1.1600000000000001
      0 references
      Methanosphaera cuniculi
      16S Identity %
      24.130879345603272
      POCPu
      2.156549520766773
      G+C Difference (%)
      0.129999999999999
      0 references
      Methanobacterium bryantii
      16S Identity %
      23.97151898734177
      POCPu
      1.7928756782259965
      G+C Difference (%)
      5.239999999999998
      0 references
      Thermoplasma volcanium
      16S Identity %
      23.923444976076556
      POCPu
      1.4861165428236214
      G+C Difference (%)
      11.970000000000002
      0 references
      Methanobacterium oryzae
      16S Identity %
      23.87231089521166
      0 references
      Thermoplasma acidophilum
      16S Identity %
      23.81930184804928
      POCPu
      1.4061872237846524
      G+C Difference (%)
      18.040000000000003
      0 references
      Methanobacterium veterum
      16S Identity %
      23.79540400296516
      POCPu
      1.9766611097880447
      G+C Difference (%)
      5.220000000000002
      0 references
      Methanobacterium congolense
      16S Identity %
      23.651452282157674
      POCPu
      1.9914215686274508
      G+C Difference (%)
      10.540000000000003
      0 references
      Methanobacterium palustre
      16S Identity %
      23.61308677098151
      0 references
      Methanobrevibacter olleyae
      16S Identity %
      23.557312252964426
      POCPu
      2.399409376153562
      G+C Difference (%)
      1.1499999999999986
      0 references
      Methanobrevibacter curvatus
      16S Identity %
      23.5509904622157
      POCPu
      2.4213075060532687
      G+C Difference (%)
      2.2300000000000004
      0 references
      Methanocaldococcus bathoardescens
      16S Identity %
      23.517382413087933
      POCPu
      2.4662813102119463
      G+C Difference (%)
      2.84
      0 references
      Methanobrevibacter ruminantium
      16S Identity %
      23.500697350069736
      POCPu
      2.245028864656831
      G+C Difference (%)
      4.690000000000001
      0 references
      Methanobacterium formicicum
      16S Identity %
      23.47826086956522
      POCPu
      1.8473652331920047
      G+C Difference (%)
      13.419999999999998
      0 references
      Methanobacterium aggregans
      16S Identity %
      23.466476462196862
      POCPu
      2.091917591125198
      G+C Difference (%)
      10.190000000000001
      0 references
      Methanocaldococcus jannaschii
      16S Identity %
      23.465211459754435
      POCPu
      2.467811158798283
      G+C Difference (%)
      3.34
      0 references
      Methanobacterium alcaliphilum
      16S Identity %
      23.458540042523033
      POCPu
      2.3898199875853505
      G+C Difference (%)
      5.449999999999999
      0 references
      Methanobacterium petrolearium
      16S Identity %
      23.42406876790831
      POCPu
      1.742586365025986
      G+C Difference (%)
      9.820000000000004
      0 references
      Methanobacterium subterraneum
      16S Identity %
      23.312456506610996
      POCPu
      1.668156091748585
      G+C Difference (%)
      11.45
      0 references
      Methanobrevibacter boviskoreani
      16S Identity %
      23.294117647058822
      POCPu
      2.33433734939759
      G+C Difference (%)
      1.0300000000000011
      0 references
      Methanococcus aeolicus
      16S Identity %
      23.171565276828435
      POCPu
      2.2504091653027825
      G+C Difference (%)
      2.09
      0 references
      Methanobacterium movens
      16S Identity %
      23.157162726008345
      0 references
      Methanococcus vannielii
      16S Identity %
      23.15068493150685
      POCPu
      2.3639774859287055
      G+C Difference (%)
      3.379999999999999
      0 references
      Methanothermococcus thermolithotrophicus
      16S Identity %
      23.002754820936637
      POCPu
      2.802303262955854
      G+C Difference (%)
      4.940000000000001
      0 references
      Methanocaldococcus vulcanius
      16S Identity %
      22.93577981651376
      POCPu
      2.3507462686567164
      G+C Difference (%)
      3.629999999999999
      0 references
      Methanobacterium aarhusense
      16S Identity %
      22.81226626776365
      0 references
      Methanobrevibacter acididurans
      16S Identity %
      22.744220730797913
      0 references
      Methanobacterium flexile
      16S Identity %
      22.67037552155772
      0 references
      Methanobacterium kanagiense
      16S Identity %
      22.542955326460483
      0 references
      Methanotorris formicicus
      16S Identity %
      22.28298017771702
      POCPu
      2.6398054880166724
      G+C Difference (%)
      4.489999999999998
      0 references
      Methanothermococcus okinawensis
      16S Identity %
      22.214627477785374
      POCPu
      2.825077399380805
      G+C Difference (%)
      1.3300000000000018
      0 references
      Methanobacterium alkalithermotolerans
      16S Identity %
      22.157676348547717
      POCPu
      2.633289986996099
      G+C Difference (%)
      8.400000000000002
      0 references
      Methanocaldococcus villosus
      16S Identity %
      22.145804676753784
      POCPu
      2.8297779712668696
      G+C Difference (%)
      1.5500000000000007
      0 references
      Methanotorris igneus
      16S Identity %
      21.85792349726776
      POCPu
      2.7727106895293687
      G+C Difference (%)
      4.349999999999998
      0 references
      CAZyme
      GH23
      Occurance
      1
      0 references
      GH0
      Occurance
      2
      0 references
      GT66
      Occurance
      1
      0 references
      GT13
      Occurance
      1
      0 references
      GT4
      Occurance
      10
      0 references
      GT2
      Occurance
      15
      0 references
      GT1
      Occurance
      1
      0 references
      GT28
      Occurance
      1
      0 references
      GT9
      Occurance
      1
      0 references
      CE14
      Occurance
      1
      0 references
      CBM50
      Occurance
      3
      0 references
      MAGs
      no MAG matches found
      0 references
       
      Retrieved from "https://taxakg.zbmed.de/w/index.php?title=Item:Q179988&oldid=3684094"