GCA_017609525.1 (Q168253): Difference between revisions
Appearance
Added qualifier: POCPu (P4): 2.5802580258025802 |
Created claim: MAGs (P28): no MAG matches found (Q42716) |
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| (166 intermediate revisions by the same user not shown) | |||||||
| Property / Comparison to close relatives: Methanobacterium petrolearium / qualifier | |||||||
G+C Difference (%): 5.860000000000003
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobacterium formicicum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobacterium formicicum / qualifier | |||||||
16S Identity %: 73.4065934065934
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| Property / Comparison to close relatives: Methanobacterium formicicum / qualifier | |||||||
POCPu: 2.7348394768133173
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| Property / Comparison to close relatives: Methanobacterium formicicum / qualifier | |||||||
G+C Difference (%): 9.459999999999997
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobrevibacter boviskoreani / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobrevibacter boviskoreani / qualifier | |||||||
16S Identity %: 73.3596837944664
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| Property / Comparison to close relatives: Methanobrevibacter boviskoreani / qualifier | |||||||
POCPu: 3.164091243561442
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| Property / Comparison to close relatives: Methanobrevibacter boviskoreani / qualifier | |||||||
G+C Difference (%): 2.9299999999999997
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobacterium kanagiense / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobacterium kanagiense / qualifier | |||||||
16S Identity %: 73.27823691460054
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobrevibacter millerae / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobrevibacter millerae / qualifier | |||||||
16S Identity %: 73.20574162679426
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| Property / Comparison to close relatives: Methanobrevibacter millerae / qualifier | |||||||
POCPu: 2.4776119402985075
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| Property / Comparison to close relatives: Methanobrevibacter millerae / qualifier | |||||||
G+C Difference (%): 4.510000000000002
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanosphaera cuniculi / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanosphaera cuniculi / qualifier | |||||||
16S Identity %: 73.15573770491804
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| Property / Comparison to close relatives: Methanosphaera cuniculi / qualifier | |||||||
POCPu: 3.078721745908028
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| Property / Comparison to close relatives: Methanosphaera cuniculi / qualifier | |||||||
G+C Difference (%): 3.830000000000002
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobacterium lacus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobacterium lacus / qualifier | |||||||
16S Identity %: 73.14884068810771
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| Property / Comparison to close relatives: Methanobacterium lacus / qualifier | |||||||
POCPu: 2.7690550956323152
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| Property / Comparison to close relatives: Methanobacterium lacus / qualifier | |||||||
G+C Difference (%): 3.919999999999998
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobrevibacter olleyae / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobrevibacter olleyae / qualifier | |||||||
16S Identity %: 73.04625199362042
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| Property / Comparison to close relatives: Methanobrevibacter olleyae / qualifier | |||||||
POCPu: 2.67051605918441
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| Property / Comparison to close relatives: Methanobrevibacter olleyae / qualifier | |||||||
G+C Difference (%): 5.109999999999999
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobrevibacter arboriphilus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobrevibacter arboriphilus / qualifier | |||||||
16S Identity %: 73.04625199362042
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| Property / Comparison to close relatives: Methanobrevibacter arboriphilus / qualifier | |||||||
POCPu: 2.697166268350973
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| Property / Comparison to close relatives: Methanobrevibacter arboriphilus / qualifier | |||||||
G+C Difference (%): 6.469999999999999
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanocaldococcus vulcanius / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanocaldococcus vulcanius / qualifier | |||||||
16S Identity %: 72.89455060155697
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| Property / Comparison to close relatives: Methanocaldococcus vulcanius / qualifier | |||||||
POCPu: 3.6105032822757113
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| Property / Comparison to close relatives: Methanocaldococcus vulcanius / qualifier | |||||||
G+C Difference (%): 0.33000000000000185
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobrevibacter acididurans / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobrevibacter acididurans / qualifier | |||||||
16S Identity %: 72.76119402985076
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobrevibacter cuticularis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobrevibacter cuticularis / qualifier | |||||||
16S Identity %: 72.69938650306749
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| Property / Comparison to close relatives: Methanobrevibacter cuticularis / qualifier | |||||||
POCPu: 2.7248850952068286
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| Property / Comparison to close relatives: Methanobrevibacter cuticularis / qualifier | |||||||
G+C Difference (%): 5.120000000000001
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobrevibacter woesei / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobrevibacter woesei / qualifier | |||||||
16S Identity %: 72.43202416918429
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| Property / Comparison to close relatives: Methanobrevibacter woesei / qualifier | |||||||
POCPu: 2.848224736636754
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| Property / Comparison to close relatives: Methanobrevibacter woesei / qualifier | |||||||
G+C Difference (%): 2.0100000000000016
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobrevibacter smithii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobrevibacter smithii / qualifier | |||||||
16S Identity %: 72.42320819112628
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| Property / Comparison to close relatives: Methanobrevibacter smithii / qualifier | |||||||
POCPu: 2.5715320536037667
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| Property / Comparison to close relatives: Methanobrevibacter smithii / qualifier | |||||||
G+C Difference (%): 0.879999999999999
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobrevibacter curvatus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobrevibacter curvatus / qualifier | |||||||
16S Identity %: 72.31680236861584
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| Property / Comparison to close relatives: Methanobrevibacter curvatus / qualifier | |||||||
POCPu: 2.5397900440230274
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| Property / Comparison to close relatives: Methanobrevibacter curvatus / qualifier | |||||||
G+C Difference (%): 6.190000000000001
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanosphaera stadtmanae / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanosphaera stadtmanae / qualifier | |||||||
16S Identity %: 72.1311475409836
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| Property / Comparison to close relatives: Methanosphaera stadtmanae / qualifier | |||||||
POCPu: 2.84247927358863
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| Property / Comparison to close relatives: Methanosphaera stadtmanae / qualifier | |||||||
G+C Difference (%): 4.280000000000001
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobrevibacter thaueri / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobrevibacter thaueri / qualifier | |||||||
16S Identity %: 72.04130262112788
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| Property / Comparison to close relatives: Methanobrevibacter thaueri / qualifier | |||||||
POCPu: 2.306952899711631
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| Property / Comparison to close relatives: Methanobrevibacter thaueri / qualifier | |||||||
G+C Difference (%): 4.959999999999997
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobrevibacter ruminantium / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobrevibacter ruminantium / qualifier | |||||||
16S Identity %: 72.01963534361852
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| Property / Comparison to close relatives: Methanobrevibacter ruminantium / qualifier | |||||||
POCPu: 2.3899371069182394
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| Property / Comparison to close relatives: Methanobrevibacter ruminantium / qualifier | |||||||
G+C Difference (%): 0.7300000000000004
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanococcus voltae / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanococcus voltae / qualifier | |||||||
16S Identity %: 71.89856065798492
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| Property / Comparison to close relatives: Methanococcus voltae / qualifier | |||||||
POCPu: 2.5848765432098766
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| Property / Comparison to close relatives: Methanococcus voltae / qualifier | |||||||
G+C Difference (%): 2.9200000000000017
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobrevibacter filiformis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobrevibacter filiformis / qualifier | |||||||
16S Identity %: 71.54471544715447
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| Property / Comparison to close relatives: Methanobrevibacter filiformis / qualifier | |||||||
POCPu: 2.7406646111682083
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| Property / Comparison to close relatives: Methanobrevibacter filiformis / qualifier | |||||||
G+C Difference (%): 4.920000000000002
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| Property / CAZyme | |||||||
| Property / CAZyme: GH28 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH28 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GH3 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH3 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GH15 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH15 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GH0 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH0 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT2 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT2 / qualifier | |||||||
Occurance: 11
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| Property / CAZyme | |||||||
| Property / CAZyme: GT66 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT66 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT22 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT22 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT4 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT4 / qualifier | |||||||
Occurance: 4
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| Property / CAZyme | |||||||
| Property / CAZyme: GT1 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT1 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT55 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT55 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: CE14 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CE14 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: CBM50 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM50 / qualifier | |||||||
Occurance: 2
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| Property / CAZyme | |||||||
| Property / CAZyme: CBM13 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM13 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: CBM5 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM5 / qualifier | |||||||
Occurance: 1
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| Property / Pathway | |||||||
| Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / rank | |||||||
Normal rank | |||||||
| Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Acylglycerol degradation / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Acylglycerol degradation / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc / rank | |||||||
Normal rank | |||||||
| Property / Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc / qualifier | |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: insect gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: mouse gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human vaginal metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: freshwater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: coral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: coral metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: coral metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: pig gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: chicken gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: marine metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: marine metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: plant metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: plant metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: plant metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: soil metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: soil metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: soil metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human oral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: activated sludge metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: wastewater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: rhizosphere metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: marine sediment metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Prevalence (%): 0.1
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| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human lung metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: bovine gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human skin metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / MAGs | |||||||
| Property / MAGs: no MAG matches found / rank | |||||||
Normal rank | |||||||
Latest revision as of 04:48, 18 August 2026
genome assembly
| Language | Label | Description | Also known as |
|---|---|---|---|
| default for all languages | No label defined |
||
| English | GCA_017609525.1 |
genome assembly |
Statements
no current description - please contribute here
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