GCA_017608705.1 (Q168111): Difference between revisions
Appearance
Added qualifier: 16S Identity % (P3): 25.07062146892655 |
Created claim: MAGs (P28): no MAG matches found (Q42716) |
||||||
| (139 intermediate revisions by the same user not shown) | |||||||
| Property / Comparison to close relatives: Thermococcus alcaliphilus / qualifier | |||||||
POCPu: 3.691639522258415
| |||||||
| Property / Comparison to close relatives: Thermococcus alcaliphilus / qualifier | |||||||
G+C Difference (%): 2.6700000000000017
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermococcus henrietii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermococcus henrietii / qualifier | |||||||
16S Identity %: 25.035460992907797
| |||||||
| Property / Comparison to close relatives: Thermococcus henrietii / qualifier | |||||||
POCPu: 3.1630971993410215
| |||||||
| Property / Comparison to close relatives: Thermococcus henrietii / qualifier | |||||||
G+C Difference (%): 14.219999999999999
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermococcus celer / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermococcus celer / qualifier | |||||||
16S Identity %: 24.680851063829788
| |||||||
| Property / Comparison to close relatives: Thermococcus celer / qualifier | |||||||
POCPu: 3.422619047619048
| |||||||
| Property / Comparison to close relatives: Thermococcus celer / qualifier | |||||||
G+C Difference (%): 16.090000000000003
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermococcus coalescens / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermococcus coalescens / qualifier | |||||||
16S Identity %: 24.680851063829788
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermococcus indicus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermococcus indicus / qualifier | |||||||
16S Identity %: 24.62949894142555
| |||||||
| Property / Comparison to close relatives: Thermococcus indicus / qualifier | |||||||
POCPu: 2.7035725780495654
| |||||||
| Property / Comparison to close relatives: Thermococcus indicus / qualifier | |||||||
G+C Difference (%): 14.5
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Pyrococcus yayanosii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Pyrococcus yayanosii / qualifier | |||||||
16S Identity %: 24.62526766595289
| |||||||
| Property / Comparison to close relatives: Pyrococcus yayanosii / qualifier | |||||||
POCPu: 3.910181958962447
| |||||||
| Property / Comparison to close relatives: Pyrococcus yayanosii / qualifier | |||||||
G+C Difference (%): 11.280000000000001
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanotorris igneus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanotorris igneus / qualifier | |||||||
16S Identity %: 24.50284090909091
| |||||||
| Property / Comparison to close relatives: Methanotorris igneus / qualifier | |||||||
POCPu: 3.4482758620689653
| |||||||
| Property / Comparison to close relatives: Methanotorris igneus / qualifier | |||||||
G+C Difference (%): 8.060000000000002
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermococcus aegaeus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermococcus aegaeus / qualifier | |||||||
16S Identity %: 24.486907289455058
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermococcus argininiproducens / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermococcus argininiproducens / qualifier | |||||||
16S Identity %: 24.360795454545457
| |||||||
| Property / Comparison to close relatives: Thermococcus argininiproducens / qualifier | |||||||
POCPu: 3.460706560922855
| |||||||
| Property / Comparison to close relatives: Thermococcus argininiproducens / qualifier | |||||||
G+C Difference (%): 0.9200000000000017
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanofervidicoccus abyssi / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanofervidicoccus abyssi / qualifier | |||||||
16S Identity %: 24.130589070262598
| |||||||
| Property / Comparison to close relatives: Methanofervidicoccus abyssi / qualifier | |||||||
POCPu: 3.881511746680286
| |||||||
| Property / Comparison to close relatives: Methanofervidicoccus abyssi / qualifier | |||||||
G+C Difference (%): 5.109999999999999
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermococcus barossii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermococcus barossii / qualifier | |||||||
16S Identity %: 24.04255319148936
| |||||||
| Property / Comparison to close relatives: Thermococcus barossii / qualifier | |||||||
POCPu: 3.3625730994152043
| |||||||
| Property / Comparison to close relatives: Thermococcus barossii / qualifier | |||||||
G+C Difference (%): 14.329999999999998
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermococcus hydrothermalis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermococcus hydrothermalis / qualifier | |||||||
16S Identity %: 23.97163120567376
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermococcus profundus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermococcus profundus / qualifier | |||||||
16S Identity %: 23.97163120567376
| |||||||
| Property / Comparison to close relatives: Thermococcus profundus / qualifier | |||||||
POCPu: 3.1172511512575274
| |||||||
| Property / Comparison to close relatives: Thermococcus profundus / qualifier | |||||||
G+C Difference (%): 12.730000000000004
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermococcus zilligii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermococcus zilligii / qualifier | |||||||
16S Identity %: 23.874195854181558
| |||||||
| Property / Comparison to close relatives: Thermococcus zilligii / qualifier | |||||||
POCPu: 3.3904910366328913
| |||||||
| Property / Comparison to close relatives: Thermococcus zilligii / qualifier | |||||||
G+C Difference (%): 14.119999999999997
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermococcus thermotolerans / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermococcus thermotolerans / qualifier | |||||||
16S Identity %: 23.383084577114428
| |||||||
| Property / Comparison to close relatives: Thermococcus thermotolerans / qualifier | |||||||
POCPu: 2.8523489932885906
| |||||||
| Property / Comparison to close relatives: Thermococcus thermotolerans / qualifier | |||||||
G+C Difference (%): 13.130000000000003
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanocaldococcus vulcanius / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanocaldococcus vulcanius / qualifier | |||||||
16S Identity %: 22.151450813871197
| |||||||
| Property / Comparison to close relatives: Methanocaldococcus vulcanius / qualifier | |||||||
POCPu: 3.168155970755483
| |||||||
| Property / Comparison to close relatives: Methanocaldococcus vulcanius / qualifier | |||||||
G+C Difference (%): 8.780000000000001
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH23 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH23 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT7 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT7 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT66 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT66 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT2 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT2 / qualifier | |||||||
Occurance: 5
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT4 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT4 / qualifier | |||||||
Occurance: 6
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT0 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT0 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT32 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT32 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: PL12 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: PL12 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM50 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM50 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / Pathway | |||||||
| Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / rank | |||||||
Normal rank | |||||||
| Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Acetate to acetyl-CoA / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Acetate to acetyl-CoA / qualifier | |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: insect gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: mouse gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human vaginal metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: freshwater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: coral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: coral metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: coral metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: pig gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: chicken gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: marine metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: marine metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: plant metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: plant metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: plant metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: soil metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: soil metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: soil metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human oral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: activated sludge metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: wastewater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: rhizosphere metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: marine sediment metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human lung metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: bovine gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human skin metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / MAGs | |||||||
| Property / MAGs: no MAG matches found / rank | |||||||
Normal rank | |||||||
Latest revision as of 04:25, 18 August 2026
genome assembly
| Language | Label | Description | Also known as |
|---|---|---|---|
| default for all languages | No label defined |
||
| English | GCA_017608705.1 |
genome assembly |
Statements
no current description - please contribute here
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references