GCA_017608625.1 (Q168105): Difference between revisions
Appearance
Added qualifier: 16S Identity % (P3): 71.24137931034483 |
Created claim: MAGs (P28): no MAG matches found (Q42716) |
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| Property / Comparison to close relatives: Nitrosopumilus zosterae / qualifier | |||||||
POCPu: 1.5878616796047988
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| Property / Comparison to close relatives: Nitrosopumilus zosterae / qualifier | |||||||
G+C Difference (%): 2.7199999999999953
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Nitrosopumilus ureiphilus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Nitrosopumilus ureiphilus / qualifier | |||||||
16S Identity %: 71.22252747252747
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Nitrosopumilus piranensis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Nitrosopumilus piranensis / qualifier | |||||||
16S Identity %: 71.01648351648352
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| Property / Comparison to close relatives: Nitrosopumilus piranensis / qualifier | |||||||
POCPu: 1.2539184952978055
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| Property / Comparison to close relatives: Nitrosopumilus piranensis / qualifier | |||||||
G+C Difference (%): 2.629999999999999
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Nitrosopumilus oxyclinae / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Nitrosopumilus oxyclinae / qualifier | |||||||
16S Identity %: 71.01648351648352
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Nitrosopumilus adriaticus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Nitrosopumilus adriaticus / qualifier | |||||||
16S Identity %: 71.01648351648352
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| Property / Comparison to close relatives: Nitrosopumilus adriaticus / qualifier | |||||||
POCPu: 1.3959822948586993
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| Property / Comparison to close relatives: Nitrosopumilus adriaticus / qualifier | |||||||
G+C Difference (%): 2.2199999999999953
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Nitrosopumilus cobalaminigenes / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Nitrosopumilus cobalaminigenes / qualifier | |||||||
16S Identity %: 70.81043956043956
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Sulfurihydrogenibium yellowstonense / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Sulfurihydrogenibium yellowstonense / qualifier | |||||||
16S Identity %: 66.59663865546219
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| Property / Comparison to close relatives: Sulfurihydrogenibium yellowstonense / qualifier | |||||||
POCPu: 0.46253469010175763
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| Property / Comparison to close relatives: Sulfurihydrogenibium yellowstonense / qualifier | |||||||
G+C Difference (%): 1.629999999999999
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Sulfurihydrogenibium subterraneum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Sulfurihydrogenibium subterraneum / qualifier | |||||||
16S Identity %: 64.77850399419027
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| Property / Comparison to close relatives: Sulfurihydrogenibium subterraneum / qualifier | |||||||
POCPu: 0.6628003314001657
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| Property / Comparison to close relatives: Sulfurihydrogenibium subterraneum / qualifier | |||||||
G+C Difference (%): 1.0999999999999979
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Sulfurihydrogenibium rodmanii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Sulfurihydrogenibium rodmanii / qualifier | |||||||
16S Identity %: 64.45396145610277
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Sulfurihydrogenibium azorense / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Sulfurihydrogenibium azorense / qualifier | |||||||
16S Identity %: 64.29080541696365
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| Property / Comparison to close relatives: Sulfurihydrogenibium azorense / qualifier | |||||||
POCPu: 0.7777322963569382
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| Property / Comparison to close relatives: Sulfurihydrogenibium azorense / qualifier | |||||||
G+C Difference (%): 1.5599999999999987
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Sulfurihydrogenibium kristjanssonii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Sulfurihydrogenibium kristjanssonii / qualifier | |||||||
16S Identity %: 64.05919661733616
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| Property / CAZyme | |||||||
| Property / CAZyme: GH3 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH3 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GH23 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH23 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT66 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT66 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT3 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT3 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT2 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT2 / qualifier | |||||||
Occurance: 5
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| Property / CAZyme | |||||||
| Property / CAZyme: GT4 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT4 / qualifier | |||||||
Occurance: 2
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| Property / CAZyme | |||||||
| Property / CAZyme: GT9 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT9 / qualifier | |||||||
Occurance: 3
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| Property / CAZyme | |||||||
| Property / CAZyme: CBM50 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM50 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: CBM5 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM5 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: CBM20 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM20 / qualifier | |||||||
Occurance: 1
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| Property / Pathway | |||||||
| Property / Pathway: Cysteine biosynthesis, serine => cysteine / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Cysteine biosynthesis, serine => cysteine / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc / rank | |||||||
Normal rank | |||||||
| Property / Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man / rank | |||||||
Normal rank | |||||||
| Property / Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Mannose degradation / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Mannose degradation / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Lactate production / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Lactate production / qualifier | |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: insect gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: mouse gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human vaginal metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: freshwater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: coral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: coral metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: coral metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: pig gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: chicken gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: marine metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: marine metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: plant metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: plant metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: plant metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: soil metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: soil metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: soil metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human oral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: activated sludge metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: wastewater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: rhizosphere metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: marine sediment metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human lung metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: bovine gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human skin metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / MAGs | |||||||
| Property / MAGs: no MAG matches found / rank | |||||||
Normal rank | |||||||
Latest revision as of 04:17, 18 August 2026
genome assembly
| Language | Label | Description | Also known as |
|---|---|---|---|
| default for all languages | No label defined |
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| English | GCA_017608625.1 |
genome assembly |
Statements
no current description - please contribute here
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