GCA_017608525.1 (Q168038): Difference between revisions
Appearance
Added qualifier: 16S Identity % (P3): 75.12402551381999 |
Created claim: MAGs (P28): no MAG matches found (Q42716) |
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| Property / Comparison to close relatives: Thermococcus alcaliphilus / qualifier | |||||||
POCPu: 4.815509693558474
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| Property / Comparison to close relatives: Thermococcus alcaliphilus / qualifier | |||||||
G+C Difference (%): 11.310000000000002
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermococcus celericrescens / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermococcus celericrescens / qualifier | |||||||
16S Identity %: 75.06793478260869
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| Property / Comparison to close relatives: Thermococcus celericrescens / qualifier | |||||||
POCPu: 3.523035230352303
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| Property / Comparison to close relatives: Thermococcus celericrescens / qualifier | |||||||
G+C Difference (%): 22.57
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermococcus thioreducens / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermococcus thioreducens / qualifier | |||||||
16S Identity %: 75.05211952744962
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| Property / Comparison to close relatives: Thermococcus thioreducens / qualifier | |||||||
POCPu: 4.3251088534107405
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| Property / Comparison to close relatives: Thermococcus thioreducens / qualifier | |||||||
G+C Difference (%): 21.730000000000004
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobacterium oryzae / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobacterium oryzae / qualifier | |||||||
16S Identity %: 75.05211952744962
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermococcus coalescens / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermococcus coalescens / qualifier | |||||||
16S Identity %: 75.03392130257802
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermococcus camini / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermococcus camini / qualifier | |||||||
16S Identity %: 74.93206521739131
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| Property / Comparison to close relatives: Thermococcus camini / qualifier | |||||||
POCPu: 4.2611060743427025
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| Property / Comparison to close relatives: Thermococcus camini / qualifier | |||||||
G+C Difference (%): 22.910000000000004
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanococcus aeolicus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanococcus aeolicus / qualifier | |||||||
16S Identity %: 74.93169398907104
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| Property / Comparison to close relatives: Methanococcus aeolicus / qualifier | |||||||
POCPu: 3.457346862081924
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| Property / Comparison to close relatives: Methanococcus aeolicus / qualifier | |||||||
G+C Difference (%): 1.6799999999999997
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanonatronarchaeum thermophilum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanonatronarchaeum thermophilum / qualifier | |||||||
16S Identity %: 74.84662576687117
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| Property / Comparison to close relatives: Methanonatronarchaeum thermophilum / qualifier | |||||||
POCPu: 2.6018099547511313
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| Property / Comparison to close relatives: Methanonatronarchaeum thermophilum / qualifier | |||||||
G+C Difference (%): 6.18
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanocaldococcus vulcanius / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanocaldococcus vulcanius / qualifier | |||||||
16S Identity %: 74.84143763213531
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| Property / Comparison to close relatives: Methanocaldococcus vulcanius / qualifier | |||||||
POCPu: 4.590956161546427
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| Property / Comparison to close relatives: Methanocaldococcus vulcanius / qualifier | |||||||
G+C Difference (%): 0.14000000000000057
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermococcus gorgonarius / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermococcus gorgonarius / qualifier | |||||||
16S Identity %: 74.7728860936408
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| Property / Comparison to close relatives: Thermococcus gorgonarius / qualifier | |||||||
POCPu: 4.5
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| Property / Comparison to close relatives: Thermococcus gorgonarius / qualifier | |||||||
G+C Difference (%): 19.950000000000003
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermococcus hydrothermalis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermococcus hydrothermalis / qualifier | |||||||
16S Identity %: 74.73684210526315
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Pyrococcus yayanosii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Pyrococcus yayanosii / qualifier | |||||||
16S Identity %: 74.7159090909091
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| Property / Comparison to close relatives: Pyrococcus yayanosii / qualifier | |||||||
POCPu: 4.804506295559974
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| Property / Comparison to close relatives: Pyrococcus yayanosii / qualifier | |||||||
G+C Difference (%): 19.92
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermococcus zilligii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermococcus zilligii / qualifier | |||||||
16S Identity %: 74.58904109589041
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| Property / Comparison to close relatives: Thermococcus zilligii / qualifier | |||||||
POCPu: 4.89836721092969
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| Property / Comparison to close relatives: Thermococcus zilligii / qualifier | |||||||
G+C Difference (%): 22.759999999999998
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermococcus argininiproducens / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermococcus argininiproducens / qualifier | |||||||
16S Identity %: 74.56896551724138
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| Property / Comparison to close relatives: Thermococcus argininiproducens / qualifier | |||||||
POCPu: 4.892489872234341
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| Property / Comparison to close relatives: Thermococcus argininiproducens / qualifier | |||||||
G+C Difference (%): 7.719999999999999
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanococcus vannielii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanococcus vannielii / qualifier | |||||||
16S Identity %: 74.55540355677155
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| Property / Comparison to close relatives: Methanococcus vannielii / qualifier | |||||||
POCPu: 3.226925746009716
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| Property / Comparison to close relatives: Methanococcus vannielii / qualifier | |||||||
G+C Difference (%): 0.39000000000000057
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobacterium movilense / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobacterium movilense / qualifier | |||||||
16S Identity %: 74.44113263785394
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobacterium paludis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobacterium paludis / qualifier | |||||||
16S Identity %: 74.08412483039348
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| Property / Comparison to close relatives: Methanobacterium paludis / qualifier | |||||||
POCPu: 3.345413994981879
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| Property / Comparison to close relatives: Methanobacterium paludis / qualifier | |||||||
G+C Difference (%): 4.009999999999998
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| Property / CAZyme | |||||||
| Property / CAZyme: GH38 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH38 / qualifier | |||||||
Occurance: 2
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| Property / CAZyme | |||||||
| Property / CAZyme: GH0 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH0 / qualifier | |||||||
Occurance: 3
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| Property / CAZyme | |||||||
| Property / CAZyme: GT13 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT13 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT66 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT66 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT4 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT4 / qualifier | |||||||
Occurance: 6
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| Property / CAZyme | |||||||
| Property / CAZyme: GT22 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT22 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT1 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT1 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT2 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT2 / qualifier | |||||||
Occurance: 13
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| Property / CAZyme | |||||||
| Property / CAZyme: GT9 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT9 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: PL12 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: PL12 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: CBM50 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM50 / qualifier | |||||||
Occurance: 2
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| Property / CAZyme | |||||||
| Property / CAZyme: CBM5 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM5 / qualifier | |||||||
Occurance: 1
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| Property / Pathway | |||||||
| Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Proline degradation, proline => glutamate / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Proline degradation, proline => glutamate / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Alanine degradation II / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Alanine degradation II / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Methionine degradation II / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Methionine degradation II / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Proline degradation / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Proline degradation / qualifier | |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: insect gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: mouse gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human vaginal metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: freshwater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: coral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: coral metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: coral metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: pig gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: chicken gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: marine metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: marine metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: plant metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: plant metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: plant metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: soil metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: soil metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: soil metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human oral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: activated sludge metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: wastewater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: rhizosphere metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: marine sediment metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human lung metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: bovine gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human skin metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / MAGs | |||||||
| Property / MAGs: no MAG matches found / rank | |||||||
Normal rank | |||||||
Latest revision as of 04:08, 18 August 2026
genome assembly
| Language | Label | Description | Also known as |
|---|---|---|---|
| default for all languages | No label defined |
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| English | GCA_017608525.1 |
genome assembly |
Statements
no current description - please contribute here
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