GCA_016932615.1 (Q157492): Difference between revisions
Appearance
Added qualifier: G+C Difference (%) (P22): 6.149999999999999 |
Created claim: MAGs (P28): no MAG matches found (Q42716) |
||||||
| (146 intermediate revisions by the same user not shown) | |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Palaeococcus pacificus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Palaeococcus pacificus / qualifier | |||||||
16S Identity %: 74.52229299363057
| |||||||
| Property / Comparison to close relatives: Palaeococcus pacificus / qualifier | |||||||
POCPu: 1.9002375296912115
| |||||||
| Property / Comparison to close relatives: Palaeococcus pacificus / qualifier | |||||||
G+C Difference (%): 3.6700000000000017
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanothermobacter thermautotrophicus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanothermobacter thermautotrophicus / qualifier | |||||||
16S Identity %: 74.51388888888889
| |||||||
| Property / Comparison to close relatives: Methanothermobacter thermautotrophicus / qualifier | |||||||
POCPu: 1.5980331899200986
| |||||||
| Property / Comparison to close relatives: Methanothermobacter thermautotrophicus / qualifier | |||||||
G+C Difference (%): 2.8299999999999983
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanolacinia petrolearia / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanolacinia petrolearia / qualifier | |||||||
16S Identity %: 74.40725244072524
| |||||||
| Property / Comparison to close relatives: Methanolacinia petrolearia / qualifier | |||||||
POCPu: 1.595618004286735
| |||||||
| Property / Comparison to close relatives: Methanolacinia petrolearia / qualifier | |||||||
G+C Difference (%): 0.6899999999999977
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanothermobacter tenebrarum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanothermobacter tenebrarum / qualifier | |||||||
16S Identity %: 74.34593023255815
| |||||||
| Property / Comparison to close relatives: Methanothermobacter tenebrarum / qualifier | |||||||
POCPu: 2.3
| |||||||
| Property / Comparison to close relatives: Methanothermobacter tenebrarum / qualifier | |||||||
G+C Difference (%): 4.660000000000004
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanocaldococcus fervens / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanocaldococcus fervens / qualifier | |||||||
16S Identity %: 74.30555555555556
| |||||||
| Property / Comparison to close relatives: Methanocaldococcus fervens / qualifier | |||||||
POCPu: 1.8223989396951623
| |||||||
| Property / Comparison to close relatives: Methanocaldococcus fervens / qualifier | |||||||
G+C Difference (%): 14.490000000000002
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanocaldococcus lauensis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanocaldococcus lauensis / qualifier | |||||||
16S Identity %: 74.26584234930448
| |||||||
| Property / Comparison to close relatives: Methanocaldococcus lauensis / qualifier | |||||||
POCPu: 1.7953929539295395
| |||||||
| Property / Comparison to close relatives: Methanocaldococcus lauensis / qualifier | |||||||
G+C Difference (%): 17.66
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobacterium ferruginis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobacterium ferruginis / qualifier | |||||||
16S Identity %: 74.23802612481857
| |||||||
| Property / Comparison to close relatives: Methanobacterium ferruginis / qualifier | |||||||
POCPu: 1.4156416802042238
| |||||||
| Property / Comparison to close relatives: Methanobacterium ferruginis / qualifier | |||||||
G+C Difference (%): 9.32
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobacterium arcticum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobacterium arcticum / qualifier | |||||||
16S Identity %: 74.18889689978371
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanocaldococcus vulcanius / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanocaldococcus vulcanius / qualifier | |||||||
16S Identity %: 74.10071942446042
| |||||||
| Property / Comparison to close relatives: Methanocaldococcus vulcanius / qualifier | |||||||
POCPu: 1.4654348518636509
| |||||||
| Property / Comparison to close relatives: Methanocaldococcus vulcanius / qualifier | |||||||
G+C Difference (%): 15.130000000000003
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobacterium paludis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobacterium paludis / qualifier | |||||||
16S Identity %: 74.03047091412742
| |||||||
| Property / Comparison to close relatives: Methanobacterium paludis / qualifier | |||||||
POCPu: 1.4886393314181248
| |||||||
| Property / Comparison to close relatives: Methanobacterium paludis / qualifier | |||||||
G+C Difference (%): 10.980000000000004
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Palaeococcus ferrophilus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Palaeococcus ferrophilus / qualifier | |||||||
16S Identity %: 74.00145243282498
| |||||||
| Property / Comparison to close relatives: Palaeococcus ferrophilus / qualifier | |||||||
POCPu: 1.5074024226110363
| |||||||
| Property / Comparison to close relatives: Palaeococcus ferrophilus / qualifier | |||||||
G+C Difference (%): 7.600000000000001
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanothrix thermoacetophila / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanothrix thermoacetophila / qualifier | |||||||
16S Identity %: 73.95833333333334
| |||||||
| Property / Comparison to close relatives: Methanothrix thermoacetophila / qualifier | |||||||
POCPu: 1.725219573400251
| |||||||
| Property / Comparison to close relatives: Methanothrix thermoacetophila / qualifier | |||||||
G+C Difference (%): 6.839999999999996
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermococcus argininiproducens / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermococcus argininiproducens / qualifier | |||||||
16S Identity %: 73.6417033773862
| |||||||
| Property / Comparison to close relatives: Thermococcus argininiproducens / qualifier | |||||||
POCPu: 1.8545349174152421
| |||||||
| Property / Comparison to close relatives: Thermococcus argininiproducens / qualifier | |||||||
G+C Difference (%): 7.270000000000003
| |||||||
| Property / Carbon source | |||||||
| Property / Carbon source: starch / rank | |||||||
Normal rank | |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH57 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH57 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH133 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH133 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH0 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH0 / qualifier | |||||||
Occurance: 2
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH43 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH43 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT66 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT66 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT4 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT4 / qualifier | |||||||
Occurance: 11
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT3 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT3 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT35 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT35 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT2 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT2 / qualifier | |||||||
Occurance: 9
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT0 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT0 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CE14 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CE14 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM50 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM50 / qualifier | |||||||
Occurance: 2
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM12 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM12 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / Pathway | |||||||
| Property / Pathway: Glycolysis, core module involving three-carbon compounds / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Glycolysis, core module involving three-carbon compounds / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: UDP-GalNAcA biosynthesis, UDP-GlcNAc => UDP-GalNAcA / rank | |||||||
Normal rank | |||||||
| Property / Pathway: UDP-GalNAcA biosynthesis, UDP-GlcNAc => UDP-GalNAcA / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Arginine degradation I / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Arginine degradation I / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Pyruvate:ferredoxin oxidoreductase / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Pyruvate:ferredoxin oxidoreductase / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Lactate production / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Lactate production / qualifier | |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: insect gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: mouse gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human vaginal metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: freshwater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: coral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: coral metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: coral metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: pig gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: chicken gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: marine metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: marine metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: plant metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: plant metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: plant metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: soil metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: soil metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: soil metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human oral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: activated sludge metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: wastewater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: rhizosphere metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: marine sediment metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human lung metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: bovine gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human skin metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / MAGs | |||||||
| Property / MAGs: no MAG matches found / rank | |||||||
Normal rank | |||||||
Latest revision as of 10:20, 17 August 2026
genome assembly
| Language | Label | Description | Also known as |
|---|---|---|---|
| default for all languages | No label defined |
||
| English | GCA_016932615.1 |
genome assembly |
Statements
no current description - please contribute here
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references