GCA_025923455.1 (Q155653): Difference between revisions
Appearance
Added qualifier: POCPu (P4): 2.4119087996985114 |
Created claim: MAGs (P28): no MAG matches found (Q42716) |
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| (184 intermediate revisions by the same user not shown) | |||||||
| Property / Comparison to close relatives: Sulfurisphaera ohwakuensis / qualifier | |||||||
G+C Difference (%): 3.1000000000000014
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Desulfurococcus mucosus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Desulfurococcus mucosus / qualifier | |||||||
16S Identity %: 77.68651608487338
| |||||||
| Property / Comparison to close relatives: Desulfurococcus mucosus / qualifier | |||||||
POCPu: 2.0104654365188654
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| Property / Comparison to close relatives: Desulfurococcus mucosus / qualifier | |||||||
G+C Difference (%): 17.29
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanotorris formicicus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanotorris formicicus / qualifier | |||||||
16S Identity %: 77.58031442241969
| |||||||
| Property / Comparison to close relatives: Methanotorris formicicus / qualifier | |||||||
POCPu: 2.724472873726605
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| Property / Comparison to close relatives: Methanotorris formicicus / qualifier | |||||||
G+C Difference (%): 3.4100000000000037
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Desulfurococcus amylolyticus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Desulfurococcus amylolyticus / qualifier | |||||||
16S Identity %: 77.29468599033817
| |||||||
| Property / Comparison to close relatives: Desulfurococcus amylolyticus / qualifier | |||||||
POCPu: 2.140504939626784
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| Property / Comparison to close relatives: Desulfurococcus amylolyticus / qualifier | |||||||
G+C Difference (%): 9.309999999999995
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Metallosphaera javensis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Metallosphaera javensis / qualifier | |||||||
16S Identity %: 77.19178082191782
| |||||||
| Property / Comparison to close relatives: Metallosphaera javensis / qualifier | |||||||
POCPu: 2.4680851063829787
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| Property / Comparison to close relatives: Metallosphaera javensis / qualifier | |||||||
G+C Difference (%): 11.449999999999996
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Vulcanisaeta distributa / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Vulcanisaeta distributa / qualifier | |||||||
16S Identity %: 77.18579234972678
| |||||||
| Property / Comparison to close relatives: Vulcanisaeta distributa / qualifier | |||||||
POCPu: 1.6559718484785757
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| Property / Comparison to close relatives: Vulcanisaeta distributa / qualifier | |||||||
G+C Difference (%): 9.579999999999998
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Sulfuracidifex tepidarius / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Sulfuracidifex tepidarius / qualifier | |||||||
16S Identity %: 77.13874910136592
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| Property / Comparison to close relatives: Sulfuracidifex tepidarius / qualifier | |||||||
POCPu: 2.1721641190667738
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| Property / Comparison to close relatives: Sulfuracidifex tepidarius / qualifier | |||||||
G+C Difference (%): 6.539999999999999
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Pyrobaculum calidifontis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Pyrobaculum calidifontis / qualifier | |||||||
16S Identity %: 76.88098495212039
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| Property / Comparison to close relatives: Pyrobaculum calidifontis / qualifier | |||||||
POCPu: 1.7135325131810195
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| Property / Comparison to close relatives: Pyrobaculum calidifontis / qualifier | |||||||
G+C Difference (%): 21.299999999999997
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanocaldococcus bathoardescens / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanocaldococcus bathoardescens / qualifier | |||||||
16S Identity %: 76.70765027322405
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| Property / Comparison to close relatives: Methanocaldococcus bathoardescens / qualifier | |||||||
POCPu: 2.5146050292100584
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| Property / Comparison to close relatives: Methanocaldococcus bathoardescens / qualifier | |||||||
G+C Difference (%): 5.060000000000002
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanocaldococcus fervens / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanocaldococcus fervens / qualifier | |||||||
16S Identity %: 76.64383561643837
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| Property / Comparison to close relatives: Methanocaldococcus fervens / qualifier | |||||||
POCPu: 2.589079723147911
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| Property / Comparison to close relatives: Methanocaldococcus fervens / qualifier | |||||||
G+C Difference (%): 3.6300000000000026
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Ignicoccus islandicus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Ignicoccus islandicus / qualifier | |||||||
16S Identity %: 76.55703289013296
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| Property / Comparison to close relatives: Ignicoccus islandicus / qualifier | |||||||
POCPu: 2.049934296977661
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| Property / Comparison to close relatives: Ignicoccus islandicus / qualifier | |||||||
G+C Difference (%): 9.049999999999997
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Sulfophobococcus zilligii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Sulfophobococcus zilligii / qualifier | |||||||
16S Identity %: 76.48705388383486
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanothermococcus thermolithotrophicus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanothermococcus thermolithotrophicus / qualifier | |||||||
16S Identity %: 76.41379310344828
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| Property / Comparison to close relatives: Methanothermococcus thermolithotrophicus / qualifier | |||||||
POCPu: 2.128198631872308
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| Property / Comparison to close relatives: Methanothermococcus thermolithotrophicus / qualifier | |||||||
G+C Difference (%): 2.960000000000001
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobrevibacter smithii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobrevibacter smithii / qualifier | |||||||
16S Identity %: 76.00545330606681
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| Property / Comparison to close relatives: Methanobrevibacter smithii / qualifier | |||||||
POCPu: 1.8312298935906954
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| Property / Comparison to close relatives: Methanobrevibacter smithii / qualifier | |||||||
G+C Difference (%): 4.82
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanococcus aeolicus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanococcus aeolicus / qualifier | |||||||
16S Identity %: 75.87149692412851
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| Property / Comparison to close relatives: Methanococcus aeolicus / qualifier | |||||||
POCPu: 1.8489170628631801
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| Property / Comparison to close relatives: Methanococcus aeolicus / qualifier | |||||||
G+C Difference (%): 5.810000000000002
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanothermococcus okinawensis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanothermococcus okinawensis / qualifier | |||||||
16S Identity %: 75.81967213114754
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| Property / Comparison to close relatives: Methanothermococcus okinawensis / qualifier | |||||||
POCPu: 2.215995924605196
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| Property / Comparison to close relatives: Methanothermococcus okinawensis / qualifier | |||||||
G+C Difference (%): 6.57
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| Property / CAZyme | |||||||
| Property / CAZyme: GH0 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH0 / qualifier | |||||||
Occurance: 3
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| Property / CAZyme | |||||||
| Property / CAZyme: GH101 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH101 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GH13 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH13 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GH76 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH76 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GH19 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH19 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GH130 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH130 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GH105 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH105 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT7 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT7 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT66 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT66 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT22 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT22 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT1 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT1 / qualifier | |||||||
Occurance: 2
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| Property / CAZyme | |||||||
| Property / CAZyme: GT2 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT2 / qualifier | |||||||
Occurance: 14
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| Property / CAZyme | |||||||
| Property / CAZyme: GT4 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT4 / qualifier | |||||||
Occurance: 5
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| Property / CAZyme | |||||||
| Property / CAZyme: GT55 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT55 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT0 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT0 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT81 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT81 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: CE14 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CE14 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: CBM50 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM50 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: CBM32 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM32 / qualifier | |||||||
Occurance: 7
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM2 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM2 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: CBM5 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM5 / qualifier | |||||||
Occurance: 1
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| Property / Pathway | |||||||
| Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / rank | |||||||
Normal rank | |||||||
| Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Threonine biosynthesis, aspartate => homoserine => threonine / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Threonine biosynthesis, aspartate => homoserine => threonine / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: NAD biosynthesis, aspartate => quinolinate => NAD / rank | |||||||
Normal rank | |||||||
| Property / Pathway: NAD biosynthesis, aspartate => quinolinate => NAD / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Coenzyme A biosynthesis, pantothenate => CoA / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Coenzyme A biosynthesis, pantothenate => CoA / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Arginine biosynthesis, ornithine => arginine / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Arginine biosynthesis, ornithine => arginine / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Acetate to acetyl-CoA / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Acetate to acetyl-CoA / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Propionate production II / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Propionate production II / qualifier | |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: insect gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Prevalence (%): 1.1
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| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Relative abundance (%): 0.03
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| Property / Ecosystem | |||||||
| Property / Ecosystem: mouse gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Prevalence (%): 0.1
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| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human vaginal metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Prevalence (%): 0.1
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| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: freshwater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Prevalence (%): 5.7
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| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Relative abundance (%): 0.02
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| Property / Ecosystem | |||||||
| Property / Ecosystem: coral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: coral metagenome / qualifier | |||||||
Prevalence (%): 0.2
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| Property / Ecosystem: coral metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: pig gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Prevalence (%): 1.2
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| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Relative abundance (%): 0.01
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| Property / Ecosystem | |||||||
| Property / Ecosystem: chicken gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Prevalence (%): 0.2
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| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Relative abundance (%): 0.1
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| Property / Ecosystem | |||||||
| Property / Ecosystem: marine metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine metagenome / qualifier | |||||||
Prevalence (%): 1.3
| |||||||
| Property / Ecosystem: marine metagenome / qualifier | |||||||
Relative abundance (%): 0.03
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: plant metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: plant metagenome / qualifier | |||||||
Prevalence (%): 16.3
| |||||||
| Property / Ecosystem: plant metagenome / qualifier | |||||||
Relative abundance (%): 0.16
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: soil metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: soil metagenome / qualifier | |||||||
Prevalence (%): 30.2
| |||||||
| Property / Ecosystem: soil metagenome / qualifier | |||||||
Relative abundance (%): 2.26
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human oral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Prevalence (%): 0.1
| |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Relative abundance (%): 0.06
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: activated sludge metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Prevalence (%): 3.3
| |||||||
| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: wastewater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Prevalence (%): 4.8
| |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Relative abundance (%): 0.08
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: rhizosphere metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Prevalence (%): 55.3
| |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Relative abundance (%): 0.39
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: marine sediment metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Prevalence (%): 9.6
| |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Relative abundance (%): 0.28
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human lung metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Prevalence (%): 0.2
| |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Relative abundance (%): 0.03
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: bovine gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Prevalence (%): 0.9
| |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Relative abundance (%): 0.01
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human skin metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Prevalence (%): 0.7
| |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Relative abundance (%): 7.03
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Prevalence (%): 0.2
| |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / MAGs | |||||||
| Property / MAGs: no MAG matches found / rank | |||||||
Normal rank | |||||||
Latest revision as of 07:29, 17 August 2026
genome assembly
| Language | Label | Description | Also known as |
|---|---|---|---|
| default for all languages | No label defined |
||
| English | GCA_025923455.1 |
genome assembly |
Statements
no current description - please contribute here
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