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GCA_001872185.1 (Q48074): Difference between revisions

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Added qualifier: Domain (P9): Archaea (Q302)
 
(124 intermediate revisions by the same user not shown)
Property / GTDB: Archaea / qualifier
 
Property / GTDB: Archaea / qualifier
 
Property / GTDB: Archaea / qualifier
 
Property / GTDB: Archaea / qualifier
 
Property / GTDB: Archaea / qualifier
 
Property / GTDB: Archaea / qualifier
 
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Sulfodiicoccus acidiphilus / rank
 
Normal rank
Property / Comparison to close relatives: Sulfodiicoccus acidiphilus / qualifier
 
16S Identity %: 25.142857142857146
Amount25.142857142857146
Unit1
Property / Comparison to close relatives: Sulfodiicoccus acidiphilus / qualifier
 
POCPu: 0.6196518146946002
Amount0.6196518146946002
Unit1
Property / Comparison to close relatives: Sulfodiicoccus acidiphilus / qualifier
 
G+C Difference (%): 19.509999999999998
Amount19.509999999999998
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Haloarcula salaria / rank
 
Normal rank
Property / Comparison to close relatives: Haloarcula salaria / qualifier
 
16S Identity %: 24.33936022253129
Amount24.33936022253129
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Haloarcula quadrata / rank
 
Normal rank
Property / Comparison to close relatives: Haloarcula quadrata / qualifier
 
16S Identity %: 23.852573018080665
Amount23.852573018080665
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Haloarcula amylolytica / rank
 
Normal rank
Property / Comparison to close relatives: Haloarcula amylolytica / qualifier
 
16S Identity %: 23.64394993045897
Amount23.64394993045897
Unit1
Property / Comparison to close relatives: Haloarcula amylolytica / qualifier
 
POCPu: 0.3136639874534405
Amount0.3136639874534405
Unit1
Property / Comparison to close relatives: Haloarcula amylolytica / qualifier
 
G+C Difference (%): 30.479999999999997
Amount30.479999999999997
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Haloarcula marismortui / rank
 
Normal rank
Property / Comparison to close relatives: Haloarcula marismortui / qualifier
 
16S Identity %: 23.57440890125174
Amount23.57440890125174
Unit1
Property / Comparison to close relatives: Haloarcula marismortui / qualifier
 
POCPu: 0.3229483282674772
Amount0.3229483282674772
Unit1
Property / Comparison to close relatives: Haloarcula marismortui / qualifier
 
G+C Difference (%): 29.479999999999997
Amount29.479999999999997
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Haloarcula japonica / rank
 
Normal rank
Property / Comparison to close relatives: Haloarcula japonica / qualifier
 
16S Identity %: 23.57440890125174
Amount23.57440890125174
Unit1
Property / Comparison to close relatives: Haloarcula japonica / qualifier
 
POCPu: 0.2897430944562488
Amount0.2897430944562488
Unit1
Property / Comparison to close relatives: Haloarcula japonica / qualifier
 
G+C Difference (%): 29.54
Amount29.54
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Haloarcula argentinensis / rank
 
Normal rank
Property / Comparison to close relatives: Haloarcula argentinensis / qualifier
 
16S Identity %: 23.36578581363004
Amount23.36578581363004
Unit1
Property / Comparison to close relatives: Haloarcula argentinensis / qualifier
 
POCPu: 0.31533307055577453
Amount0.31533307055577453
Unit1
Property / Comparison to close relatives: Haloarcula argentinensis / qualifier
 
G+C Difference (%): 29.479999999999997
Amount29.479999999999997
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Haloarcula hispanica / rank
 
Normal rank
Property / Comparison to close relatives: Haloarcula hispanica / qualifier
 
16S Identity %: 23.29624478442281
Amount23.29624478442281
Unit1
Property / Comparison to close relatives: Haloarcula hispanica / qualifier
 
POCPu: 0.3176620076238882
Amount0.3176620076238882
Unit1
Property / Comparison to close relatives: Haloarcula hispanica / qualifier
 
G+C Difference (%): 30.810000000000002
Amount30.810000000000002
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Halomicroarcula salina / rank
 
Normal rank
Property / Comparison to close relatives: Halomicroarcula salina / qualifier
 
16S Identity %: 23.29624478442281
Amount23.29624478442281
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Haloarcula vallismortis / rank
 
Normal rank
Property / Comparison to close relatives: Haloarcula vallismortis / qualifier
 
16S Identity %: 23.226703755215578
Amount23.226703755215578
Unit1
Property / Comparison to close relatives: Haloarcula vallismortis / qualifier
 
POCPu: 0.3711340206185567
Amount0.3711340206185567
Unit1
Property / Comparison to close relatives: Haloarcula vallismortis / qualifier
 
G+C Difference (%): 30.159999999999997
Amount30.159999999999997
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Haloarcula salina / rank
 
Normal rank
Property / Comparison to close relatives: Haloarcula salina / qualifier
 
POCPu: 0.38927335640138405
Amount0.38927335640138405
Unit1
Property / Comparison to close relatives: Haloarcula salina / qualifier
 
G+C Difference (%): 35.09
Amount35.09
Unit1
Property / CAZyme
 
Property / CAZyme: GH23 / rank
 
Normal rank
Property / CAZyme: GH23 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GH0 / rank
 
Normal rank
Property / CAZyme: GH0 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GH130 / rank
 
Normal rank
Property / CAZyme: GH130 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT7 / rank
 
Normal rank
Property / CAZyme: GT7 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT66 / rank
 
Normal rank
Property / CAZyme: GT66 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT4 / rank
 
Normal rank
Property / CAZyme: GT4 / qualifier
 
Occurance: 4
Amount4
Unit1
Property / CAZyme
 
Property / CAZyme: GT2 / rank
 
Normal rank
Property / CAZyme: GT2 / qualifier
 
Occurance: 6
Amount6
Unit1
Property / CAZyme
 
Property / CAZyme: GT0 / rank
 
Normal rank
Property / CAZyme: GT0 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: CBM50 / rank
 
Normal rank
Property / CAZyme: CBM50 / qualifier
 
Occurance: 2
Amount2
Unit1
Property / Pathway
 
Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / rank
 
Normal rank
Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / qualifier
 
Property / Pathway
 
Property / Pathway: Acylglycerol degradation / rank
 
Normal rank
Property / Pathway: Acylglycerol degradation / qualifier
 
Property / Pathway
 
Property / Pathway: Lactate production / rank
 
Normal rank
Property / Pathway: Lactate production / qualifier
 
Property / Ecosystem
 
Property / Ecosystem: insect gut metagenome / rank
 
Normal rank
Property / Ecosystem: insect gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: insect gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: mouse gut metagenome / rank
 
Normal rank
Property / Ecosystem: mouse gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: mouse gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human vaginal metagenome / rank
 
Normal rank
Property / Ecosystem: human vaginal metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human vaginal metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: freshwater metagenome / rank
 
Normal rank
Property / Ecosystem: freshwater metagenome / qualifier
 
Prevalence (%): 0.6
Amount0.6
Unit1
Property / Ecosystem: freshwater metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: coral metagenome / rank
 
Normal rank
Property / Ecosystem: coral metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: coral metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: pig gut metagenome / rank
 
Normal rank
Property / Ecosystem: pig gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: pig gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: chicken gut metagenome / rank
 
Normal rank
Property / Ecosystem: chicken gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: chicken gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine metagenome / rank
 
Normal rank
Property / Ecosystem: marine metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: marine metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: plant metagenome / rank
 
Normal rank
Property / Ecosystem: plant metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: plant metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: soil metagenome / rank
 
Normal rank
Property / Ecosystem: soil metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: soil metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human oral metagenome / rank
 
Normal rank
Property / Ecosystem: human oral metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human oral metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: activated sludge metagenome / rank
 
Normal rank
Property / Ecosystem: activated sludge metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: activated sludge metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: wastewater metagenome / rank
 
Normal rank
Property / Ecosystem: wastewater metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: wastewater metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: rhizosphere metagenome / rank
 
Normal rank
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine sediment metagenome / rank
 
Normal rank
Property / Ecosystem: marine sediment metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: marine sediment metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human lung metagenome / rank
 
Normal rank
Property / Ecosystem: human lung metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human lung metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: bovine gut metagenome / rank
 
Normal rank
Property / Ecosystem: bovine gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: bovine gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human skin metagenome / rank
 
Normal rank
Property / Ecosystem: human skin metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human skin metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human gut metagenome / rank
 
Normal rank
Property / Ecosystem: human gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / MAGs
 
Property / MAGs: no MAG matches found / rank
 
Normal rank

Latest revision as of 06:55, 23 July 2026

genome assembly
Language Label Description Also known as
default for all languages
No label defined
    English
    GCA_001872185.1
    genome assembly

      Statements

      no current description - please contribute here
      0 references
      25.142857142857146
      0.6196518146946002
      19.509999999999998
      0 references
      0 references
      23.852573018080665
      0 references
      23.64394993045897
      0.3136639874534405
      30.479999999999997
      0 references
      23.57440890125174
      0.3229483282674772
      29.479999999999997
      0 references
      23.57440890125174
      0.2897430944562488
      0 references
      23.36578581363004
      0.31533307055577453
      29.479999999999997
      0 references
      23.29624478442281
      0.3176620076238882
      30.810000000000002
      0 references
      0 references
      23.226703755215578
      0.3711340206185567
      30.159999999999997
      0 references
      0.38927335640138405
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references