GCA_001872185.1 (Q48074): Difference between revisions
Appearance
Added qualifier: Domain (P9): Archaea (Q302) |
Created claim: MAGs (P28): no MAG matches found (Q42716) |
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| Property / GTDB: Archaea / qualifier | |||||||
| Property / GTDB: Archaea / qualifier | |||||||
| Property / GTDB: Archaea / qualifier | |||||||
| Property / GTDB: Archaea / qualifier | |||||||
| Property / GTDB: Archaea / qualifier | |||||||
| Property / GTDB: Archaea / qualifier | |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Sulfodiicoccus acidiphilus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Sulfodiicoccus acidiphilus / qualifier | |||||||
16S Identity %: 25.142857142857146
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| Property / Comparison to close relatives: Sulfodiicoccus acidiphilus / qualifier | |||||||
POCPu: 0.6196518146946002
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| Property / Comparison to close relatives: Sulfodiicoccus acidiphilus / qualifier | |||||||
G+C Difference (%): 19.509999999999998
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Haloarcula salaria / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Haloarcula salaria / qualifier | |||||||
16S Identity %: 24.33936022253129
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Haloarcula quadrata / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Haloarcula quadrata / qualifier | |||||||
16S Identity %: 23.852573018080665
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Haloarcula amylolytica / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Haloarcula amylolytica / qualifier | |||||||
16S Identity %: 23.64394993045897
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| Property / Comparison to close relatives: Haloarcula amylolytica / qualifier | |||||||
POCPu: 0.3136639874534405
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| Property / Comparison to close relatives: Haloarcula amylolytica / qualifier | |||||||
G+C Difference (%): 30.479999999999997
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Haloarcula marismortui / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Haloarcula marismortui / qualifier | |||||||
16S Identity %: 23.57440890125174
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| Property / Comparison to close relatives: Haloarcula marismortui / qualifier | |||||||
POCPu: 0.3229483282674772
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| Property / Comparison to close relatives: Haloarcula marismortui / qualifier | |||||||
G+C Difference (%): 29.479999999999997
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Haloarcula japonica / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Haloarcula japonica / qualifier | |||||||
16S Identity %: 23.57440890125174
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| Property / Comparison to close relatives: Haloarcula japonica / qualifier | |||||||
POCPu: 0.2897430944562488
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| Property / Comparison to close relatives: Haloarcula japonica / qualifier | |||||||
G+C Difference (%): 29.54
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Haloarcula argentinensis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Haloarcula argentinensis / qualifier | |||||||
16S Identity %: 23.36578581363004
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| Property / Comparison to close relatives: Haloarcula argentinensis / qualifier | |||||||
POCPu: 0.31533307055577453
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| Property / Comparison to close relatives: Haloarcula argentinensis / qualifier | |||||||
G+C Difference (%): 29.479999999999997
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Haloarcula hispanica / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Haloarcula hispanica / qualifier | |||||||
16S Identity %: 23.29624478442281
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| Property / Comparison to close relatives: Haloarcula hispanica / qualifier | |||||||
POCPu: 0.3176620076238882
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| Property / Comparison to close relatives: Haloarcula hispanica / qualifier | |||||||
G+C Difference (%): 30.810000000000002
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Halomicroarcula salina / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Halomicroarcula salina / qualifier | |||||||
16S Identity %: 23.29624478442281
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Haloarcula vallismortis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Haloarcula vallismortis / qualifier | |||||||
16S Identity %: 23.226703755215578
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| Property / Comparison to close relatives: Haloarcula vallismortis / qualifier | |||||||
POCPu: 0.3711340206185567
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| Property / Comparison to close relatives: Haloarcula vallismortis / qualifier | |||||||
G+C Difference (%): 30.159999999999997
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Haloarcula salina / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Haloarcula salina / qualifier | |||||||
POCPu: 0.38927335640138405
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| Property / Comparison to close relatives: Haloarcula salina / qualifier | |||||||
G+C Difference (%): 35.09
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| Property / CAZyme | |||||||
| Property / CAZyme: GH23 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH23 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GH0 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH0 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GH130 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH130 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT7 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT7 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT66 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT66 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT4 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT4 / qualifier | |||||||
Occurance: 4
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| Property / CAZyme | |||||||
| Property / CAZyme: GT2 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT2 / qualifier | |||||||
Occurance: 6
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| Property / CAZyme | |||||||
| Property / CAZyme: GT0 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT0 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: CBM50 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM50 / qualifier | |||||||
Occurance: 2
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| Property / Pathway | |||||||
| Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Acylglycerol degradation / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Acylglycerol degradation / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Lactate production / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Lactate production / qualifier | |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: insect gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: mouse gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human vaginal metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: freshwater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Prevalence (%): 0.6
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| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: coral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: coral metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: coral metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: pig gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: chicken gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: marine metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: marine metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: plant metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: plant metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: plant metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: soil metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: soil metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: soil metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human oral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: activated sludge metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: wastewater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: rhizosphere metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: marine sediment metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human lung metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: bovine gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human skin metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / MAGs | |||||||
| Property / MAGs: no MAG matches found / rank | |||||||
Normal rank | |||||||
Latest revision as of 06:55, 23 July 2026
genome assembly
| Language | Label | Description | Also known as |
|---|---|---|---|
| default for all languages | No label defined |
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| English | GCA_001872185.1 |
genome assembly |
Statements
no current description - please contribute here
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