GCA_016784125.1 (Q149574): Difference between revisions
Appearance
Added qualifier: 16S Identity % (P3): 23.483226266952176 |
Created claim: MAGs (P28): no MAG matches found (Q42716) |
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| (173 intermediate revisions by the same user not shown) | |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanofervidicoccus abyssi / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanofervidicoccus abyssi / qualifier | |||||||
16S Identity %: 23.440712816997944
| |||||||
| Property / Comparison to close relatives: Methanofervidicoccus abyssi / qualifier | |||||||
POCPu: 3.7678648765699436
| |||||||
| Property / Comparison to close relatives: Methanofervidicoccus abyssi / qualifier | |||||||
G+C Difference (%): 1.5600000000000023
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanothermobacter marburgensis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanothermobacter marburgensis / qualifier | |||||||
16S Identity %: 23.440712816997944
| |||||||
| Property / Comparison to close relatives: Methanothermobacter marburgensis / qualifier | |||||||
POCPu: 2.857142857142857
| |||||||
| Property / Comparison to close relatives: Methanothermobacter marburgensis / qualifier | |||||||
G+C Difference (%): 14.950000000000003
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermococcus celericrescens / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermococcus celericrescens / qualifier | |||||||
16S Identity %: 23.424657534246577
| |||||||
| Property / Comparison to close relatives: Thermococcus celericrescens / qualifier | |||||||
POCPu: 2.246256239600666
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| Property / Comparison to close relatives: Thermococcus celericrescens / qualifier | |||||||
G+C Difference (%): 20.6
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobacterium veterum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobacterium veterum / qualifier | |||||||
16S Identity %: 23.40585146286572
| |||||||
| Property / Comparison to close relatives: Methanobacterium veterum / qualifier | |||||||
POCPu: 2.146814404432133
| |||||||
| Property / Comparison to close relatives: Methanobacterium veterum / qualifier | |||||||
G+C Difference (%): 0.519999999999996
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobacterium arcticum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobacterium arcticum / qualifier | |||||||
16S Identity %: 23.340471092077088
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanosphaera stadtmanae / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanosphaera stadtmanae / qualifier | |||||||
16S Identity %: 23.303632625085672
| |||||||
| Property / Comparison to close relatives: Methanosphaera stadtmanae / qualifier | |||||||
POCPu: 2.8033794162826418
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| Property / Comparison to close relatives: Methanosphaera stadtmanae / qualifier | |||||||
G+C Difference (%): 6.059999999999999
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanosphaera cuniculi / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanosphaera cuniculi / qualifier | |||||||
16S Identity %: 23.266986959505832
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| Property / Comparison to close relatives: Methanosphaera cuniculi / qualifier | |||||||
POCPu: 2.8062191884717484
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| Property / Comparison to close relatives: Methanosphaera cuniculi / qualifier | |||||||
G+C Difference (%): 5.609999999999999
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermococcus litoralis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermococcus litoralis / qualifier | |||||||
16S Identity %: 23.15068493150685
| |||||||
| Property / Comparison to close relatives: Thermococcus litoralis / qualifier | |||||||
POCPu: 2.789518174133559
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| Property / Comparison to close relatives: Thermococcus litoralis / qualifier | |||||||
G+C Difference (%): 9.400000000000006
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermoplasma acidophilum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermoplasma acidophilum / qualifier | |||||||
16S Identity %: 22.923816060398078
| |||||||
| Property / Comparison to close relatives: Thermoplasma acidophilum / qualifier | |||||||
POCPu: 2.0213577421815407
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| Property / Comparison to close relatives: Thermoplasma acidophilum / qualifier | |||||||
G+C Difference (%): 12.300000000000004
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanotorris formicicus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanotorris formicicus / qualifier | |||||||
16S Identity %: 22.823851953392733
| |||||||
| Property / Comparison to close relatives: Methanotorris formicicus / qualifier | |||||||
POCPu: 3.187250996015936
| |||||||
| Property / Comparison to close relatives: Methanotorris formicicus / qualifier | |||||||
G+C Difference (%): 1.25
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanothermobacter thermautotrophicus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanothermobacter thermautotrophicus / qualifier | |||||||
16S Identity %: 22.808219178082194
| |||||||
| Property / Comparison to close relatives: Methanothermobacter thermautotrophicus / qualifier | |||||||
POCPu: 2.971311475409836
| |||||||
| Property / Comparison to close relatives: Methanothermobacter thermautotrophicus / qualifier | |||||||
G+C Difference (%): 15.850000000000001
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermococcus siculi / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermococcus siculi / qualifier | |||||||
16S Identity %: 22.701555869872703
| |||||||
| Property / Comparison to close relatives: Thermococcus siculi / qualifier | |||||||
POCPu: 3.103448275862069
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| Property / Comparison to close relatives: Thermococcus siculi / qualifier | |||||||
G+C Difference (%): 21.300000000000004
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermococcus indicus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermococcus indicus / qualifier | |||||||
16S Identity %: 22.622478386167145
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| Property / Comparison to close relatives: Thermococcus indicus / qualifier | |||||||
POCPu: 2.4002313475997687
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| Property / Comparison to close relatives: Thermococcus indicus / qualifier | |||||||
G+C Difference (%): 21.17
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Palaeococcus helgesonii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Palaeococcus helgesonii / qualifier | |||||||
16S Identity %: 22.6056338028169
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermococcus thermotolerans / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermococcus thermotolerans / qualifier | |||||||
16S Identity %: 22.474226804123713
| |||||||
| Property / Comparison to close relatives: Thermococcus thermotolerans / qualifier | |||||||
POCPu: 2.942059441609126
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| Property / Comparison to close relatives: Thermococcus thermotolerans / qualifier | |||||||
G+C Difference (%): 19.800000000000004
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermococcus hydrothermalis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermococcus hydrothermalis / qualifier | |||||||
16S Identity %: 22.45042492917847
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanonatronarchaeum thermophilum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanonatronarchaeum thermophilum / qualifier | |||||||
16S Identity %: 22.42798353909465
| |||||||
| Property / Comparison to close relatives: Methanonatronarchaeum thermophilum / qualifier | |||||||
POCPu: 2.7258566978193146
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| Property / Comparison to close relatives: Methanonatronarchaeum thermophilum / qualifier | |||||||
G+C Difference (%): 4.210000000000001
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanococcus vannielii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanococcus vannielii / qualifier | |||||||
16S Identity %: 22.016460905349795
| |||||||
| Property / Comparison to close relatives: Methanococcus vannielii / qualifier | |||||||
POCPu: 2.7519656897784133
| |||||||
| Property / Comparison to close relatives: Methanococcus vannielii / qualifier | |||||||
G+C Difference (%): 2.3599999999999994
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobacterium palustre / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobacterium palustre / qualifier | |||||||
16S Identity %: 20.965417867435157
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH13 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH13 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH0 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH0 / qualifier | |||||||
Occurance: 3
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH16 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH16 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT13 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT13 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT66 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT66 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT51 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT51 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT2 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT2 / qualifier | |||||||
Occurance: 21
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT22 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT22 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT4 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT4 / qualifier | |||||||
Occurance: 4
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT61 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT61 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT9 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT9 / qualifier | |||||||
Occurance: 2
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CE13 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CE13 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CE4 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CE4 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CE14 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CE14 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM50 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM50 / qualifier | |||||||
Occurance: 2
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM13 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM13 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM48 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM48 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / Pathway | |||||||
| Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / rank | |||||||
Normal rank | |||||||
| Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: UDP-GlcA/GalA biosynthesis, UDP-Glc => UDP-GlcA => UDP-GalA / rank | |||||||
Normal rank | |||||||
| Property / Pathway: UDP-GlcA/GalA biosynthesis, UDP-Glc => UDP-GlcA => UDP-GalA / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man / rank | |||||||
Normal rank | |||||||
| Property / Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Mannose degradation / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Mannose degradation / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Acetyl-CoA to acetate / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Acetyl-CoA to acetate / qualifier | |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: insect gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: mouse gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human vaginal metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: freshwater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: coral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: coral metagenome / qualifier | |||||||
Prevalence (%): 0.4
| |||||||
| Property / Ecosystem: coral metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: pig gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: chicken gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: marine metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: marine metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: plant metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: plant metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: plant metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: soil metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: soil metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: soil metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human oral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: activated sludge metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: wastewater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: rhizosphere metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: marine sediment metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Prevalence (%): 0.3
| |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human lung metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: bovine gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human skin metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / MAGs | |||||||
| Property / MAGs: no MAG matches found / rank | |||||||
Normal rank | |||||||
Latest revision as of 17:19, 16 August 2026
genome assembly
| Language | Label | Description | Also known as |
|---|---|---|---|
| default for all languages | No label defined |
||
| English | GCA_016784125.1 |
genome assembly |
Statements
no current description - please contribute here
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