GCA_024720975.1 (Q148885): Difference between revisions
Appearance
Added qualifier: 16S Identity % (P3): 26.395589248793932 |
Created claim: MAGs (P28): no MAG matches found (Q42716) |
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| (171 intermediate revisions by the same user not shown) | |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Pyrococcus horikoshii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Pyrococcus horikoshii / qualifier | |||||||
16S Identity %: 26.35925671025465
| |||||||
| Property / Comparison to close relatives: Pyrococcus horikoshii / qualifier | |||||||
POCPu: 5.583756345177665
| |||||||
| Property / Comparison to close relatives: Pyrococcus horikoshii / qualifier | |||||||
G+C Difference (%): 1.6700000000000017
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermococcus paralvinellae / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermococcus paralvinellae / qualifier | |||||||
16S Identity %: 26.312247644683715
| |||||||
| Property / Comparison to close relatives: Thermococcus paralvinellae / qualifier | |||||||
POCPu: 5.046948356807512
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| Property / Comparison to close relatives: Thermococcus paralvinellae / qualifier | |||||||
G+C Difference (%): 0.0899999999999963
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Pyrococcus yayanosii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Pyrococcus yayanosii / qualifier | |||||||
16S Identity %: 26.197183098591548
| |||||||
| Property / Comparison to close relatives: Pyrococcus yayanosii / qualifier | |||||||
POCPu: 5.897273303741281
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| Property / Comparison to close relatives: Pyrococcus yayanosii / qualifier | |||||||
G+C Difference (%): 11.43
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Desulfurococcus mucosus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Desulfurococcus mucosus / qualifier | |||||||
16S Identity %: 26.13941018766756
| |||||||
| Property / Comparison to close relatives: Desulfurococcus mucosus / qualifier | |||||||
POCPu: 4.920514761544284
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| Property / Comparison to close relatives: Desulfurococcus mucosus / qualifier | |||||||
G+C Difference (%): 12.93
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Pyrococcus furiosus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Pyrococcus furiosus / qualifier | |||||||
16S Identity %: 26.054922973878096
| |||||||
| Property / Comparison to close relatives: Pyrococcus furiosus / qualifier | |||||||
POCPu: 5.483106105512745
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| Property / Comparison to close relatives: Pyrococcus furiosus / qualifier | |||||||
G+C Difference (%): 0.5600000000000023
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermococcus piezophilus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermococcus piezophilus / qualifier | |||||||
16S Identity %: 25.978407557354927
| |||||||
| Property / Comparison to close relatives: Thermococcus piezophilus / qualifier | |||||||
POCPu: 4.574978819542502
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| Property / Comparison to close relatives: Thermococcus piezophilus / qualifier | |||||||
G+C Difference (%): 10.899999999999999
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Aeropyrum pernix / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Aeropyrum pernix / qualifier | |||||||
16S Identity %: 25.977653631284912
| |||||||
| Property / Comparison to close relatives: Aeropyrum pernix / qualifier | |||||||
POCPu: 3.5785953177257523
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| Property / Comparison to close relatives: Aeropyrum pernix / qualifier | |||||||
G+C Difference (%): 16.1
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermococcus barophilus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermococcus barophilus / qualifier | |||||||
16S Identity %: 25.96685082872928
| |||||||
| Property / Comparison to close relatives: Thermococcus barophilus / qualifier | |||||||
POCPu: 5.258645327236353
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| Property / Comparison to close relatives: Thermococcus barophilus / qualifier | |||||||
G+C Difference (%): 1.4600000000000009
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Acidilobus saccharovorans / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Acidilobus saccharovorans / qualifier | |||||||
16S Identity %: 25.15090543259557
| |||||||
| Property / Comparison to close relatives: Acidilobus saccharovorans / qualifier | |||||||
POCPu: 3.279279279279279
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| Property / Comparison to close relatives: Acidilobus saccharovorans / qualifier | |||||||
G+C Difference (%): 17.009999999999998
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermococcus eurythermalis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermococcus eurythermalis / qualifier | |||||||
16S Identity %: 25.08406186953598
| |||||||
| Property / Comparison to close relatives: Thermococcus eurythermalis / qualifier | |||||||
POCPu: 4.421289777527456
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| Property / Comparison to close relatives: Thermococcus eurythermalis / qualifier | |||||||
G+C Difference (%): 13.240000000000002
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermococcus alcaliphilus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermococcus alcaliphilus / qualifier | |||||||
16S Identity %: 24.80565371024735
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| Property / Comparison to close relatives: Thermococcus alcaliphilus / qualifier | |||||||
POCPu: 4.889022195560888
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| Property / Comparison to close relatives: Thermococcus alcaliphilus / qualifier | |||||||
G+C Difference (%): 2.8200000000000003
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermogladius calderae / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermogladius calderae / qualifier | |||||||
16S Identity %: 24.78231748158071
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| Property / Comparison to close relatives: Thermogladius calderae / qualifier | |||||||
POCPu: 5.867062755291497
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| Property / Comparison to close relatives: Thermogladius calderae / qualifier | |||||||
G+C Difference (%): 15.43
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Ferroglobus placidus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Ferroglobus placidus / qualifier | |||||||
16S Identity %: 24.248496993987974
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| Property / Comparison to close relatives: Ferroglobus placidus / qualifier | |||||||
POCPu: 3.461637819684836
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| Property / Comparison to close relatives: Ferroglobus placidus / qualifier | |||||||
G+C Difference (%): 3.9299999999999997
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| Property / CAZyme | |||||||
| Property / CAZyme: GH2 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH2 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GH38 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH38 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GH127 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH127 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GH51 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH51 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GH105 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH105 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GH0 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH0 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GH109 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH109 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT7 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT7 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT13 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT13 / qualifier | |||||||
Occurance: 2
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT66 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT66 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT2 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT2 / qualifier | |||||||
Occurance: 6
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT1 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT1 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT4 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT4 / qualifier | |||||||
Occurance: 2
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| Property / CAZyme | |||||||
| Property / CAZyme: CBM50 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM50 / qualifier | |||||||
Occurance: 3
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| Property / Pathway | |||||||
| Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / rank | |||||||
Normal rank | |||||||
| Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc / rank | |||||||
Normal rank | |||||||
| Property / Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Pentose phosphate pathway, archaea, fructose 6P => ribose 5P / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Pentose phosphate pathway, archaea, fructose 6P => ribose 5P / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Sulfur reduction, sulfur => sulfide / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Sulfur reduction, sulfur => sulfide / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man / rank | |||||||
Normal rank | |||||||
| Property / Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Histidine degradation, histidine => N-formiminoglutamate => glutamate / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Histidine degradation, histidine => N-formiminoglutamate => glutamate / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Arabinoxylan degradation / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Arabinoxylan degradation / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Mannose degradation / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Mannose degradation / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Serine degradation / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Serine degradation / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Arginine degradation I / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Arginine degradation I / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Histidine degradation / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Histidine degradation / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Pyruvate:ferredoxin oxidoreductase / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Pyruvate:ferredoxin oxidoreductase / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Hydrogen metabolism / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Hydrogen metabolism / qualifier | |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: insect gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: mouse gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human vaginal metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: freshwater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: coral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: coral metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: coral metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: pig gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: chicken gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: marine metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: marine metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: plant metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: plant metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: plant metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: soil metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: soil metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: soil metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human oral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: activated sludge metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: wastewater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: rhizosphere metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: marine sediment metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human lung metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: bovine gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human skin metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / MAGs | |||||||
| Property / MAGs: no MAG matches found / rank | |||||||
Normal rank | |||||||
Latest revision as of 15:55, 16 August 2026
genome assembly
| Language | Label | Description | Also known as |
|---|---|---|---|
| default for all languages | No label defined |
||
| English | GCA_024720975.1 |
genome assembly |
Statements
no current description - please contribute here
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