GCA_001817215.1 (Q47425): Difference between revisions
Appearance
Added qualifier: 16S Identity % (P3): 25.72980312287848 |
Created claim: MAGs (P28): no MAG matches found (Q42716) |
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| (165 intermediate revisions by the same user not shown) | |||||||
| Property / Comparison to close relatives: Ketobacter alkanivorans / qualifier | |||||||
POCPu: 0.6180469715698393
| |||||||
| Property / Comparison to close relatives: Ketobacter alkanivorans / qualifier | |||||||
G+C Difference (%): 10.350000000000001
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Bradymonas sediminis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Bradymonas sediminis / qualifier | |||||||
16S Identity %: 25.66995768688293
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| Property / Comparison to close relatives: Bradymonas sediminis / qualifier | |||||||
POCPu: 0.9320300068197318
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| Property / Comparison to close relatives: Bradymonas sediminis / qualifier | |||||||
G+C Difference (%): 20.240000000000002
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Halothiobacillus diazotrophicus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Halothiobacillus diazotrophicus / qualifier | |||||||
16S Identity %: 25.6
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| Property / Comparison to close relatives: Halothiobacillus diazotrophicus / qualifier | |||||||
POCPu: 1.0232558139534882
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| Property / Comparison to close relatives: Halothiobacillus diazotrophicus / qualifier | |||||||
G+C Difference (%): 19.83
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Desulfofundulus thermocisternus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Desulfofundulus thermocisternus / qualifier | |||||||
16S Identity %: 25.584795321637426
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Desulfofundulus thermoacetoxidans / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Desulfofundulus thermoacetoxidans / qualifier | |||||||
16S Identity %: 25.479063165365506
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Syntrophus aciditrophicus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Syntrophus aciditrophicus / qualifier | |||||||
16S Identity %: 25.45824847250509
| |||||||
| Property / Comparison to close relatives: Syntrophus aciditrophicus / qualifier | |||||||
POCPu: 1.2263099219620959
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| Property / Comparison to close relatives: Syntrophus aciditrophicus / qualifier | |||||||
G+C Difference (%): 10.560000000000002
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Desulfuromonas palmitatis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Desulfuromonas palmitatis / qualifier | |||||||
16S Identity %: 25.280112044817926
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Desulfofundulus australicus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Desulfofundulus australicus / qualifier | |||||||
16S Identity %: 25.25320729237002
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| Property / Comparison to close relatives: Desulfofundulus australicus / qualifier | |||||||
POCPu: 1.7202481669486747
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| Property / Comparison to close relatives: Desulfofundulus australicus / qualifier | |||||||
G+C Difference (%): 13.57
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Aneurinibacillus danicus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Aneurinibacillus danicus / qualifier | |||||||
16S Identity %: 25.068870523415974
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| Property / Comparison to close relatives: Aneurinibacillus danicus / qualifier | |||||||
POCPu: 1.249752033326721
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| Property / Comparison to close relatives: Aneurinibacillus danicus / qualifier | |||||||
G+C Difference (%): 5.770000000000003
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Salirhabdus salicampi / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Salirhabdus salicampi / qualifier | |||||||
16S Identity %: 25.05322924059617
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| Property / Comparison to close relatives: Salirhabdus salicampi / qualifier | |||||||
POCPu: 1.4559180372067941
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| Property / Comparison to close relatives: Salirhabdus salicampi / qualifier | |||||||
G+C Difference (%): 3.3799999999999955
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Syntrophotalea venetiana / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Syntrophotalea venetiana / qualifier | |||||||
16S Identity %: 25.0187265917603
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Bacillus ectoiniformans / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Bacillus ectoiniformans / qualifier | |||||||
16S Identity %: 24.964739069111424
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| Property / Comparison to close relatives: Bacillus ectoiniformans / qualifier | |||||||
POCPu: 1.2776412776412778
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| Property / Comparison to close relatives: Bacillus ectoiniformans / qualifier | |||||||
G+C Difference (%): 0.259999999999998
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Halothiobacillus neapolitanus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Halothiobacillus neapolitanus / qualifier | |||||||
16S Identity %: 24.9438202247191
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| Property / Comparison to close relatives: Halothiobacillus neapolitanus / qualifier | |||||||
POCPu: 0.8463541666666666
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| Property / Comparison to close relatives: Halothiobacillus neapolitanus / qualifier | |||||||
G+C Difference (%): 13.810000000000002
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Salimicrobium luteum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Salimicrobium luteum / qualifier | |||||||
16S Identity %: 24.862258953168045
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Salimicrobium halophilum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Salimicrobium halophilum / qualifier | |||||||
16S Identity %: 24.828532235939644
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| Property / Comparison to close relatives: Salimicrobium halophilum / qualifier | |||||||
POCPu: 1.1346054667354306
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| Property / Comparison to close relatives: Salimicrobium halophilum / qualifier | |||||||
G+C Difference (%): 5.649999999999999
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Syntrophotalea acetylenica / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Syntrophotalea acetylenica / qualifier | |||||||
16S Identity %: 24.67709041468389
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| Property / Comparison to close relatives: Syntrophotalea acetylenica / qualifier | |||||||
POCPu: 1.3881328252585736
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| Property / Comparison to close relatives: Syntrophotalea acetylenica / qualifier | |||||||
G+C Difference (%): 16.520000000000003
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Desulfofundulus thermobenzoicus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Desulfofundulus thermobenzoicus / qualifier | |||||||
16S Identity %: 24.320652173913043
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| Property / Comparison to close relatives: Desulfofundulus thermobenzoicus / qualifier | |||||||
POCPu: 1.5053763440860215
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| Property / Comparison to close relatives: Desulfofundulus thermobenzoicus / qualifier | |||||||
G+C Difference (%): 14.89
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Novibacillus thermophilus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Novibacillus thermophilus / qualifier | |||||||
16S Identity %: 24.224021592442647
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| Property / Comparison to close relatives: Novibacillus thermophilus / qualifier | |||||||
POCPu: 1.4753342554172428
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| Property / Comparison to close relatives: Novibacillus thermophilus / qualifier | |||||||
G+C Difference (%): 9.54
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Desulfitibacter alkalitolerans / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Desulfitibacter alkalitolerans / qualifier | |||||||
16S Identity %: 23.980978260869566
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| Property / Comparison to close relatives: Desulfitibacter alkalitolerans / qualifier | |||||||
POCPu: 1.1673151750972763
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| Property / Comparison to close relatives: Desulfitibacter alkalitolerans / qualifier | |||||||
G+C Difference (%): 1.8799999999999955
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Desulfofundulus luciae / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Desulfofundulus luciae / qualifier | |||||||
16S Identity %: 23.94843962008141
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| Property / Comparison to close relatives: Desulfofundulus luciae / qualifier | |||||||
POCPu: 1.7479560191711305
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| Property / Comparison to close relatives: Desulfofundulus luciae / qualifier | |||||||
G+C Difference (%): 14.270000000000003
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Desulfofundulus thermosubterraneus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Desulfofundulus thermosubterraneus / qualifier | |||||||
16S Identity %: 23.848797250859107
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| Property / Comparison to close relatives: Desulfofundulus thermosubterraneus / qualifier | |||||||
POCPu: 1.6005909874415167
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| Property / Comparison to close relatives: Desulfofundulus thermosubterraneus / qualifier | |||||||
G+C Difference (%): 13.950000000000003
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Hazenella coriacea / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Hazenella coriacea / qualifier | |||||||
16S Identity %: 23.224431818181817
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| Property / Comparison to close relatives: Hazenella coriacea / qualifier | |||||||
POCPu: 1.872871736662883
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| Property / Comparison to close relatives: Hazenella coriacea / qualifier | |||||||
G+C Difference (%): 1.4499999999999957
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Desulfofundulus thermobenzoicus subsp. thermosyntrophicus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Desulfofundulus thermobenzoicus subsp. thermosyntrophicus / qualifier | |||||||
16S Identity %: 23.124147339699864
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| Property / CAZyme | |||||||
| Property / CAZyme: GH13 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH13 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GH6 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH6 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GH28 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH28 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GH1 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH1 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GH0 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH0 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT51 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT51 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT13 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT13 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT4 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT4 / qualifier | |||||||
Occurance: 3
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| Property / CAZyme | |||||||
| Property / CAZyme: GT39 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT39 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT2 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT2 / qualifier | |||||||
Occurance: 6
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| Property / CAZyme | |||||||
| Property / CAZyme: GT26 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT26 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT28 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT28 / qualifier | |||||||
Occurance: 3
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| Property / CAZyme | |||||||
| Property / CAZyme: GT11 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT11 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: CBM50 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM50 / qualifier | |||||||
Occurance: 4
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| Property / CAZyme | |||||||
| Property / CAZyme: CBM13 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM13 / qualifier | |||||||
Occurance: 2
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| Property / Ecosystem | |||||||
| Property / Ecosystem: insect gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: mouse gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human vaginal metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: freshwater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: coral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: coral metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: coral metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: pig gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: chicken gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: marine metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: marine metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: plant metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: plant metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: plant metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: soil metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: soil metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: soil metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human oral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: activated sludge metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: wastewater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: rhizosphere metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: marine sediment metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human lung metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: bovine gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human skin metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / MAGs | |||||||
| Property / MAGs: no MAG matches found / rank | |||||||
Normal rank | |||||||
Latest revision as of 03:50, 23 July 2026
genome assembly
| Language | Label | Description | Also known as |
|---|---|---|---|
| default for all languages | No label defined |
||
| English | GCA_001817215.1 |
genome assembly |
Statements
no current description - please contribute here
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23.124147339699864
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