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GCF_000016125.1 (Q140568): Difference between revisions

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Added qualifier: 16S Identity % (P3): 90.86571233810497
 
(318 intermediate revisions by the same user not shown)
Property / Comparison to close relatives: Methanotorris igneus / qualifier
 
POCPu: 57.57412398921833
Amount57.57412398921833
Unit1
Property / Comparison to close relatives: Methanotorris igneus / qualifier
 
G+C Difference (%): 0.6799999999999997
Amount0.6799999999999997
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanofervidicoccus abyssi / rank
 
Normal rank
Property / Comparison to close relatives: Methanofervidicoccus abyssi / qualifier
 
16S Identity %: 90.25221540558964
Amount90.25221540558964
Unit1
Property / Comparison to close relatives: Methanofervidicoccus abyssi / qualifier
 
POCPu: 59.58664546899841
Amount59.58664546899841
Unit1
Property / Comparison to close relatives: Methanofervidicoccus abyssi / qualifier
 
G+C Difference (%): 2.270000000000003
Amount2.270000000000003
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanocaldococcus jannaschii / rank
 
Normal rank
Property / Comparison to close relatives: Methanocaldococcus jannaschii / qualifier
 
16S Identity %: 88.19918144611188
Amount88.19918144611188
Unit1
Property / Comparison to close relatives: Methanocaldococcus jannaschii / qualifier
 
POCPu: 49.5883134130146
Amount49.5883134130146
Unit1
Property / Comparison to close relatives: Methanocaldococcus jannaschii / qualifier
 
G+C Difference (%): 1.6899999999999977
Amount1.6899999999999977
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanocaldococcus fervens / rank
 
Normal rank
Property / Comparison to close relatives: Methanocaldococcus fervens / qualifier
 
16S Identity %: 88.0984952120383
Amount88.0984952120383
Unit1
Property / Comparison to close relatives: Methanocaldococcus fervens / qualifier
 
POCPu: 54.450113378684804
Amount54.450113378684804
Unit1
Property / Comparison to close relatives: Methanocaldococcus fervens / qualifier
 
G+C Difference (%): 0.759999999999998
Amount0.759999999999998
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanocaldococcus bathoardescens / rank
 
Normal rank
Property / Comparison to close relatives: Methanocaldococcus bathoardescens / qualifier
 
16S Identity %: 88.07089297886844
Amount88.07089297886844
Unit1
Property / Comparison to close relatives: Methanocaldococcus bathoardescens / qualifier
 
POCPu: 54.60157126823793
Amount54.60157126823793
Unit1
Property / Comparison to close relatives: Methanocaldococcus bathoardescens / qualifier
 
G+C Difference (%): 2.1899999999999977
Amount2.1899999999999977
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanocaldococcus lauensis / rank
 
Normal rank
Property / Comparison to close relatives: Methanocaldococcus lauensis / qualifier
 
16S Identity %: 86.78247734138974
Amount86.78247734138974
Unit1
Property / Comparison to close relatives: Methanocaldococcus lauensis / qualifier
 
POCPu: 52.888503755054884
Amount52.888503755054884
Unit1
Property / Comparison to close relatives: Methanocaldococcus lauensis / qualifier
 
G+C Difference (%): 3.929999999999996
Amount3.929999999999996
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanocaldococcus indicus / rank
 
Normal rank
Property / Comparison to close relatives: Methanocaldococcus indicus / qualifier
 
16S Identity %: 86.76680972818312
Amount86.76680972818312
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanocaldococcus vulcanius / rank
 
Normal rank
Property / Comparison to close relatives: Methanocaldococcus vulcanius / qualifier
 
16S Identity %: 86.7043847241867
Amount86.7043847241867
Unit1
Property / Comparison to close relatives: Methanocaldococcus vulcanius / qualifier
 
POCPu: 49.95889284735544
Amount49.95889284735544
Unit1
Property / Comparison to close relatives: Methanocaldococcus vulcanius / qualifier
 
G+C Difference (%): 1.3999999999999986
Amount1.3999999999999986
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanocaldococcus infernus / rank
 
Normal rank
Property / Comparison to close relatives: Methanocaldococcus infernus / qualifier
 
16S Identity %: 86.593707250342
Amount86.593707250342
Unit1
Property / Comparison to close relatives: Methanocaldococcus infernus / qualifier
 
POCPu: 47.91790600832837
Amount47.91790600832837
Unit1
Property / Comparison to close relatives: Methanocaldococcus infernus / qualifier
 
G+C Difference (%): 0.6400000000000006
Amount0.6400000000000006
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanocaldococcus villosus / rank
 
Normal rank
Property / Comparison to close relatives: Methanocaldococcus villosus / qualifier
 
16S Identity %: 86.43250688705234
Amount86.43250688705234
Unit1
Property / Comparison to close relatives: Methanocaldococcus villosus / qualifier
 
POCPu: 51.25535823637477
Amount51.25535823637477
Unit1
Property / Comparison to close relatives: Methanocaldococcus villosus / qualifier
 
G+C Difference (%): 3.479999999999997
Amount3.479999999999997
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium oryzae / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium oryzae / qualifier
 
16S Identity %: 82.29965156794425
Amount82.29965156794425
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium arcticum / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium arcticum / qualifier
 
16S Identity %: 82.17329545454545
Amount82.17329545454545
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium veterum / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium veterum / qualifier
 
16S Identity %: 82.12415856394914
Amount82.12415856394914
Unit1
Property / Comparison to close relatives: Methanobacterium veterum / qualifier
 
POCPu: 15.963622291021673
Amount15.963622291021673
Unit1
Property / Comparison to close relatives: Methanobacterium veterum / qualifier
 
G+C Difference (%): 0.19000000000000483
Amount0.19000000000000483
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanothermus sociabilis / rank
 
Normal rank
Property / Comparison to close relatives: Methanothermus sociabilis / qualifier
 
16S Identity %: 82.09876543209876
Amount82.09876543209876
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Thermococcus gammatolerans / rank
 
Normal rank
Property / Comparison to close relatives: Thermococcus gammatolerans / qualifier
 
16S Identity %: 81.92360163710778
Amount81.92360163710778
Unit1
Property / Comparison to close relatives: Thermococcus gammatolerans / qualifier
 
POCPu: 8.813392417528311
Amount8.813392417528311
Unit1
Property / Comparison to close relatives: Thermococcus gammatolerans / qualifier
 
G+C Difference (%): 20.580000000000005
Amount20.580000000000005
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Thermococcus cleftensis / rank
 
Normal rank
Property / Comparison to close relatives: Thermococcus cleftensis / qualifier
 
16S Identity %: 81.86775732788003
Amount81.86775732788003
Unit1
Property / Comparison to close relatives: Thermococcus cleftensis / qualifier
 
POCPu: 8.78344270570419
Amount8.78344270570419
Unit1
Property / Comparison to close relatives: Thermococcus cleftensis / qualifier
 
G+C Difference (%): 22.840000000000003
Amount22.840000000000003
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Pyrococcus furiosus / rank
 
Normal rank
Property / Comparison to close relatives: Pyrococcus furiosus / qualifier
 
16S Identity %: 81.86775732788003
Amount81.86775732788003
Unit1
Property / Comparison to close relatives: Pyrococcus furiosus / qualifier
 
POCPu: 9.649122807017543
Amount9.649122807017543
Unit1
Property / Comparison to close relatives: Pyrococcus furiosus / qualifier
 
G+C Difference (%): 7.790000000000006
Amount7.790000000000006
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium flexile / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium flexile / qualifier
 
16S Identity %: 81.86274509803921
Amount81.86274509803921
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanothermus fervidus / rank
 
Normal rank
Property / Comparison to close relatives: Methanothermus fervidus / qualifier
 
16S Identity %: 81.85538881309687
Amount81.85538881309687
Unit1
Property / Comparison to close relatives: Methanothermus fervidus / qualifier
 
POCPu: 21.55333749220212
Amount21.55333749220212
Unit1
Property / Comparison to close relatives: Methanothermus fervidus / qualifier
 
G+C Difference (%): 1.3399999999999963
Amount1.3399999999999963
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Thermococcus piezophilus / rank
 
Normal rank
Property / Comparison to close relatives: Thermococcus piezophilus / qualifier
 
16S Identity %: 81.79959100204499
Amount81.79959100204499
Unit1
Property / Comparison to close relatives: Thermococcus piezophilus / qualifier
 
POCPu: 9.165263411113784
Amount9.165263411113784
Unit1
Property / Comparison to close relatives: Thermococcus piezophilus / qualifier
 
G+C Difference (%): 18.130000000000003
Amount18.130000000000003
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Thermococcus kodakarensis / rank
 
Normal rank
Property / Comparison to close relatives: Thermococcus kodakarensis / qualifier
 
16S Identity %: 81.79959100204499
Amount81.79959100204499
Unit1
Property / Comparison to close relatives: Thermococcus kodakarensis / qualifier
 
POCPu: 9.093073077838609
Amount9.093073077838609
Unit1
Property / Comparison to close relatives: Thermococcus kodakarensis / qualifier
 
G+C Difference (%): 19.020000000000003
Amount19.020000000000003
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Pyrococcus kukulkanii / rank
 
Normal rank
Property / Comparison to close relatives: Pyrococcus kukulkanii / qualifier
 
16S Identity %: 81.79959100204499
Amount81.79959100204499
Unit1
Property / Comparison to close relatives: Pyrococcus kukulkanii / qualifier
 
POCPu: 8.446932814021421
Amount8.446932814021421
Unit1
Property / Comparison to close relatives: Pyrococcus kukulkanii / qualifier
 
G+C Difference (%): 11.64
Amount11.64
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium paludis / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium paludis / qualifier
 
16S Identity %: 81.78717598908595
Amount81.78717598908595
Unit1
Property / Comparison to close relatives: Methanobacterium paludis / qualifier
 
POCPu: 16.91634017054621
Amount16.91634017054621
Unit1
Property / Comparison to close relatives: Methanobacterium paludis / qualifier
 
G+C Difference (%): 2.75
Amount2.75
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Thermococcus paralvinellae / rank
 
Normal rank
Property / Comparison to close relatives: Thermococcus paralvinellae / qualifier
 
16S Identity %: 81.77474402730375
Amount81.77474402730375
Unit1
Property / Comparison to close relatives: Thermococcus paralvinellae / qualifier
 
POCPu: 9.294234592445328
Amount9.294234592445328
Unit1
Property / Comparison to close relatives: Thermococcus paralvinellae / qualifier
 
G+C Difference (%): 7.32
Amount7.32
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium movilense / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium movilense / qualifier
 
16S Identity %: 81.74366616989568
Amount81.74366616989568
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Thermococcus henrietii / rank
 
Normal rank
Property / Comparison to close relatives: Thermococcus henrietii / qualifier
 
16S Identity %: 81.73142467620995
Amount81.73142467620995
Unit1
Property / Comparison to close relatives: Thermococcus henrietii / qualifier
 
POCPu: 8.882046423495973
Amount8.882046423495973
Unit1
Property / Comparison to close relatives: Thermococcus henrietii / qualifier
 
G+C Difference (%): 21.6
Amount21.6
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Thermococcus celericrescens / rank
 
Normal rank
Property / Comparison to close relatives: Thermococcus celericrescens / qualifier
 
16S Identity %: 81.66325835037492
Amount81.66325835037492
Unit1
Property / Comparison to close relatives: Thermococcus celericrescens / qualifier
 
POCPu: 8.126969833408374
Amount8.126969833408374
Unit1
Property / Comparison to close relatives: Thermococcus celericrescens / qualifier
 
G+C Difference (%): 21.310000000000002
Amount21.310000000000002
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Thermococcus camini / rank
 
Normal rank
Property / Comparison to close relatives: Thermococcus camini / qualifier
 
16S Identity %: 81.66325835037492
Amount81.66325835037492
Unit1
Property / Comparison to close relatives: Thermococcus camini / qualifier
 
POCPu: 8.61856685545432
Amount8.61856685545432
Unit1
Property / Comparison to close relatives: Thermococcus camini / qualifier
 
G+C Difference (%): 21.650000000000006
Amount21.650000000000006
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium beijingense / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium beijingense / qualifier
 
16S Identity %: 81.65007112375532
Amount81.65007112375532
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Thermococcus atlanticus / rank
 
Normal rank
Property / Comparison to close relatives: Thermococcus atlanticus / qualifier
 
16S Identity %: 81.6223977027997
Amount81.6223977027997
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Thermococcus coalescens / rank
 
Normal rank
Property / Comparison to close relatives: Thermococcus coalescens / qualifier
 
16S Identity %: 81.52692569870484
Amount81.52692569870484
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Thermococcus thermotolerans / rank
 
Normal rank
Property / Comparison to close relatives: Thermococcus thermotolerans / qualifier
 
16S Identity %: 81.46374829001368
Amount81.46374829001368
Unit1
Property / Comparison to close relatives: Thermococcus thermotolerans / qualifier
 
POCPu: 8.735301175905928
Amount8.735301175905928
Unit1
Property / Comparison to close relatives: Thermococcus thermotolerans / qualifier
 
G+C Difference (%): 20.510000000000005
Amount20.510000000000005
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Thermococcus eurythermalis / rank
 
Normal rank
Property / Comparison to close relatives: Thermococcus eurythermalis / qualifier
 
16S Identity %: 81.4587593728698
Amount81.4587593728698
Unit1
Property / Comparison to close relatives: Thermococcus eurythermalis / qualifier
 
POCPu: 8.567314614830813
Amount8.567314614830813
Unit1
Property / Comparison to close relatives: Thermococcus eurythermalis / qualifier
 
G+C Difference (%): 20.470000000000006
Amount20.470000000000006
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanothermobacter crinale / rank
 
Normal rank
Property / Comparison to close relatives: Methanothermobacter crinale / qualifier
 
16S Identity %: 81.45048814504882
Amount81.45048814504882
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Thermococcus sibiricus / rank
 
Normal rank
Property / Comparison to close relatives: Thermococcus sibiricus / qualifier
 
16S Identity %: 81.32242672119972
Amount81.32242672119972
Unit1
Property / Comparison to close relatives: Thermococcus sibiricus / qualifier
 
POCPu: 9.439754412893322
Amount9.439754412893322
Unit1
Property / Comparison to close relatives: Thermococcus sibiricus / qualifier
 
G+C Difference (%): 7.220000000000006
Amount7.220000000000006
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanothermobacter marburgensis / rank
 
Normal rank
Property / Comparison to close relatives: Methanothermobacter marburgensis / qualifier
 
16S Identity %: 81.24147339699863
Amount81.24147339699863
Unit1
Property / Comparison to close relatives: Methanothermobacter marburgensis / qualifier
 
POCPu: 20.214521452145213
Amount20.214521452145213
Unit1
Property / Comparison to close relatives: Methanothermobacter marburgensis / qualifier
 
G+C Difference (%): 15.660000000000004
Amount15.660000000000004
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Thermococcus zilligii / rank
 
Normal rank
Property / Comparison to close relatives: Thermococcus zilligii / qualifier
 
16S Identity %: 81.2242090784044
Amount81.2242090784044
Unit1
Property / Comparison to close relatives: Thermococcus zilligii / qualifier
 
POCPu: 8.739674926725288
Amount8.739674926725288
Unit1
Property / Comparison to close relatives: Thermococcus zilligii / qualifier
 
G+C Difference (%): 21.5
Amount21.5
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Thermococcus thioreducens / rank
 
Normal rank
Property / Comparison to close relatives: Thermococcus thioreducens / qualifier
 
16S Identity %: 81.13207547169812
Amount81.13207547169812
Unit1
Property / Comparison to close relatives: Thermococcus thioreducens / qualifier
 
POCPu: 8.601381939480582
Amount8.601381939480582
Unit1
Property / Comparison to close relatives: Thermococcus thioreducens / qualifier
 
G+C Difference (%): 20.470000000000006
Amount20.470000000000006
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Palaeococcus helgesonii / rank
 
Normal rank
Property / Comparison to close relatives: Palaeococcus helgesonii / qualifier
 
16S Identity %: 81.06591865357645
Amount81.06591865357645
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Palaeococcus pacificus / rank
 
Normal rank
Property / Comparison to close relatives: Palaeococcus pacificus / qualifier
 
16S Identity %: 81.00208768267223
Amount81.00208768267223
Unit1
Property / Comparison to close relatives: Palaeococcus pacificus / qualifier
 
POCPu: 10.211449200618876
Amount10.211449200618876
Unit1
Property / Comparison to close relatives: Palaeococcus pacificus / qualifier
 
G+C Difference (%): 10.060000000000002
Amount10.060000000000002
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Thermococcus litoralis / rank
 
Normal rank
Property / Comparison to close relatives: Thermococcus litoralis / qualifier
 
16S Identity %: 80.98159509202453
Amount80.98159509202453
Unit1
Property / Comparison to close relatives: Thermococcus litoralis / qualifier
 
POCPu: 9.236031927023944
Amount9.236031927023944
Unit1
Property / Comparison to close relatives: Thermococcus litoralis / qualifier
 
G+C Difference (%): 10.110000000000007
Amount10.110000000000007
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium kanagiense / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium kanagiense / qualifier
 
16S Identity %: 80.6872852233677
Amount80.6872852233677
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanothermobacter thermautotrophicus / rank
 
Normal rank
Property / Comparison to close relatives: Methanothermobacter thermautotrophicus / qualifier
 
16S Identity %: 80.68259385665529
Amount80.68259385665529
Unit1
Property / Comparison to close relatives: Methanothermobacter thermautotrophicus / qualifier
 
POCPu: 19.73963868225292
Amount19.73963868225292
Unit1
Property / Comparison to close relatives: Methanothermobacter thermautotrophicus / qualifier
 
G+C Difference (%): 16.560000000000002
Amount16.560000000000002
Unit1
Property / Carbon source
 
Property / Carbon source: starch / rank
 
Normal rank
Property / CAZyme
 
Property / CAZyme: GH15 / rank
 
Normal rank
Property / CAZyme: GH15 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GH13 / rank
 
Normal rank
Property / CAZyme: GH13 / qualifier
 
Occurance: 2
Amount2
Unit1
Property / CAZyme
 
Property / CAZyme: GH57 / rank
 
Normal rank
Property / CAZyme: GH57 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GH0 / rank
 
Normal rank
Property / CAZyme: GH0 / qualifier
 
Occurance: 2
Amount2
Unit1
Property / CAZyme
 
Property / CAZyme: GT66 / rank
 
Normal rank
Property / CAZyme: GT66 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT4 / rank
 
Normal rank
Property / CAZyme: GT4 / qualifier
 
Occurance: 14
Amount14
Unit1
Property / CAZyme
 
Property / CAZyme: GT22 / rank
 
Normal rank
Property / CAZyme: GT22 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT5 / rank
 
Normal rank
Property / CAZyme: GT5 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT35 / rank
 
Normal rank
Property / CAZyme: GT35 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT2 / rank
 
Normal rank
Property / CAZyme: GT2 / qualifier
 
Occurance: 11
Amount11
Unit1
Property / CAZyme
 
Property / CAZyme: GT0 / rank
 
Normal rank
Property / CAZyme: GT0 / qualifier
 
Occurance: 4
Amount4
Unit1
Property / CAZyme
 
Property / CAZyme: GT1 / rank
 
Normal rank
Property / CAZyme: GT1 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT20 / rank
 
Normal rank
Property / CAZyme: GT20 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: CBM50 / rank
 
Normal rank
Property / CAZyme: CBM50 / qualifier
 
Occurance: 4
Amount4
Unit1
Property / Pathway
 
Property / Pathway: Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate / rank
 
Normal rank
Property / Pathway: Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate / qualifier
 
Property / Pathway
 
Property / Pathway: Glycolysis, core module involving three-carbon compounds / rank
 
Normal rank
Property / Pathway: Glycolysis, core module involving three-carbon compounds / qualifier
 
Property / Pathway
 
Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / rank
 
Normal rank
Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / qualifier
 
Property / Pathway
 
Property / Pathway: Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P / rank
 
Normal rank
Property / Pathway: Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P / qualifier
 
Property / Pathway
 
Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / rank
 
Normal rank
Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / qualifier
 
Property / Pathway
 
Property / Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate / rank
 
Normal rank
Property / Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate / qualifier
 
Property / Pathway
 
Property / Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate / rank
 
Normal rank
Property / Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate / qualifier
 
Property / Pathway
 
Property / Pathway: Threonine biosynthesis, aspartate => homoserine => threonine / rank
 
Normal rank
Property / Pathway: Threonine biosynthesis, aspartate => homoserine => threonine / qualifier
 
Property / Pathway
 
Property / Pathway: Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine / rank
 
Normal rank
Property / Pathway: Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine / qualifier
 
Property / Pathway
 
Property / Pathway: Ornithine biosynthesis, glutamate => ornithine / rank
 
Normal rank
Property / Pathway: Ornithine biosynthesis, glutamate => ornithine / qualifier
 
Property / Pathway
 
Property / Pathway: Adenine ribonucleotide biosynthesis, IMP => ADP, ATP / rank
 
Normal rank
Property / Pathway: Adenine ribonucleotide biosynthesis, IMP => ADP, ATP / qualifier
 
Property / Pathway
 
Property / Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP / rank
 
Normal rank
Property / Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP / qualifier
 
Property / Pathway
 
Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / rank
 
Normal rank
Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / qualifier
 
Property / Pathway
 
Property / Pathway: NAD biosynthesis, aspartate => quinolinate => NAD / rank
 
Normal rank
Property / Pathway: NAD biosynthesis, aspartate => quinolinate => NAD / qualifier
 
Property / Pathway
 
Property / Pathway: Coenzyme A biosynthesis, pantothenate => CoA / rank
 
Normal rank
Property / Pathway: Coenzyme A biosynthesis, pantothenate => CoA / qualifier
 
Property / Pathway
 
Property / Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA / rank
 
Normal rank
Property / Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA / qualifier
 
Property / Pathway
 
Property / Pathway: Coenzyme M biosynthesis / rank
 
Normal rank
Property / Pathway: Coenzyme M biosynthesis / qualifier
 
Property / Pathway
 
Property / Pathway: F420 biosynthesis, archaea / rank
 
Normal rank
Property / Pathway: F420 biosynthesis, archaea / qualifier
 
Property / Pathway
 
Property / Pathway: Acetyl-CoA pathway, CO2 => acetyl-CoA / rank
 
Normal rank
Property / Pathway: Acetyl-CoA pathway, CO2 => acetyl-CoA / qualifier
 
Property / Pathway
 
Property / Pathway: Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate / rank
 
Normal rank
Property / Pathway: Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate / qualifier
 
Property / Pathway
 
Property / Pathway: Isoleucine biosynthesis, pyruvate => 2-oxobutanoate / rank
 
Normal rank
Property / Pathway: Isoleucine biosynthesis, pyruvate => 2-oxobutanoate / qualifier
 
Property / Pathway
 
Property / Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc / rank
 
Normal rank
Property / Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc / qualifier
 
Property / Pathway
 
Property / Pathway: Pentose phosphate pathway, archaea, fructose 6P => ribose 5P / rank
 
Normal rank
Property / Pathway: Pentose phosphate pathway, archaea, fructose 6P => ribose 5P / qualifier
 
Property / Pathway
 
Property / Pathway: 2-Oxocarboxylic acid chain extension, 2-oxoglutarate => 2-oxoadipate => 2-oxopimelate => 2-oxosuberate / rank
 
Normal rank
Property / Pathway: 2-Oxocarboxylic acid chain extension, 2-oxoglutarate => 2-oxoadipate => 2-oxopimelate => 2-oxosuberate / qualifier
 
Property / Pathway
 
Property / Pathway: Arginine biosynthesis, ornithine => arginine / rank
 
Normal rank
Property / Pathway: Arginine biosynthesis, ornithine => arginine / qualifier
 
Property / Pathway
 
Property / Pathway: Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P / rank
 
Normal rank
Property / Pathway: Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P / qualifier
 
Property / Pathway
 
Property / Pathway: UDP-GlcA/GalA biosynthesis, UDP-Glc => UDP-GlcA => UDP-GalA / rank
 
Normal rank
Property / Pathway: UDP-GlcA/GalA biosynthesis, UDP-Glc => UDP-GlcA => UDP-GalA / qualifier
 
Property / Pathway
 
Property / Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man / rank
 
Normal rank
Property / Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man / qualifier
 
Property / Pathway
 
Property / Pathway: UDP-ManNAcA biosynthesis, UDP-GlcNAc => UDP-ManNAcA / rank
 
Normal rank
Property / Pathway: UDP-ManNAcA biosynthesis, UDP-GlcNAc => UDP-ManNAcA / qualifier
 
Property / Pathway
 
Property / Pathway: UDP-GalNAcA biosynthesis, UDP-GlcNAc => UDP-GalNAcA / rank
 
Normal rank
Property / Pathway: UDP-GalNAcA biosynthesis, UDP-GlcNAc => UDP-GalNAcA / qualifier
 
Property / Pathway
 
Property / Pathway: Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor / rank
 
Normal rank
Property / Pathway: Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor / qualifier
 
Property / Pathway
 
Property / Pathway: De novo purine biosynthesis, PRPP + glutamine => IMP / rank
 
Normal rank
Property / Pathway: De novo purine biosynthesis, PRPP + glutamine => IMP / qualifier
 
Property / Pathway
 
Property / Pathway: Methanogenesis, CO2 => methane / rank
 
Normal rank
Property / Pathway: Methanogenesis, CO2 => methane / qualifier
 
Property / Pathway
 
Property / Pathway: Methanogenesis, acetate => methane / rank
 
Normal rank
Property / Pathway: Methanogenesis, acetate => methane / qualifier
 
Property / Pathway
 
Property / Pathway: Mannose degradation / rank
 
Normal rank
Property / Pathway: Mannose degradation / qualifier
 
Property / Pathway
 
Property / Pathway: Alanine degradation II / rank
 
Normal rank
Property / Pathway: Alanine degradation II / qualifier
 
Property / Pathway
 
Property / Pathway: Methionine degradation I / rank
 
Normal rank
Property / Pathway: Methionine degradation I / qualifier
 
Property / Pathway
 
Property / Pathway: Arginine degradation I / rank
 
Normal rank
Property / Pathway: Arginine degradation I / qualifier
 
Property / Pathway
 
Property / Pathway: Pentose phosphate pathway (non-oxidative branch) / rank
 
Normal rank
Property / Pathway: Pentose phosphate pathway (non-oxidative branch) / qualifier
 
Property / Pathway
 
Property / Pathway: Pyruvate:ferredoxin oxidoreductase / rank
 
Normal rank
Property / Pathway: Pyruvate:ferredoxin oxidoreductase / qualifier
 
Property / Pathway
 
Property / Pathway: Acetate to acetyl-CoA / rank
 
Normal rank
Property / Pathway: Acetate to acetyl-CoA / qualifier
 
Property / Pathway
 
Property / Pathway: Methanogenesis - methyl-coM / rank
 
Normal rank
Property / Pathway: Methanogenesis - methyl-coM / qualifier
 
Property / Pathway
 
Property / Pathway: Methanogenesis from carbon dioxide / rank
 
Normal rank
Property / Pathway: Methanogenesis from carbon dioxide / qualifier
 
Property / Ecosystem
 
Property / Ecosystem: insect gut metagenome / rank
 
Normal rank
Property / Ecosystem: insect gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: insect gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: mouse gut metagenome / rank
 
Normal rank
Property / Ecosystem: mouse gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: mouse gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human vaginal metagenome / rank
 
Normal rank
Property / Ecosystem: human vaginal metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human vaginal metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: freshwater metagenome / rank
 
Normal rank
Property / Ecosystem: freshwater metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: freshwater metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: coral metagenome / rank
 
Normal rank
Property / Ecosystem: coral metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: coral metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: pig gut metagenome / rank
 
Normal rank
Property / Ecosystem: pig gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: pig gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: chicken gut metagenome / rank
 
Normal rank
Property / Ecosystem: chicken gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: chicken gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine metagenome / rank
 
Normal rank
Property / Ecosystem: marine metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: marine metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: plant metagenome / rank
 
Normal rank
Property / Ecosystem: plant metagenome / qualifier
 
Prevalence (%): 0.2
Amount0.2
Unit1
Property / Ecosystem: plant metagenome / qualifier
 
Relative abundance (%): 0.59
Amount0.59
Unit1
Property / Ecosystem
 
Property / Ecosystem: soil metagenome / rank
 
Normal rank
Property / Ecosystem: soil metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: soil metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human oral metagenome / rank
 
Normal rank
Property / Ecosystem: human oral metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human oral metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: activated sludge metagenome / rank
 
Normal rank
Property / Ecosystem: activated sludge metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: activated sludge metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: wastewater metagenome / rank
 
Normal rank
Property / Ecosystem: wastewater metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: wastewater metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: rhizosphere metagenome / rank
 
Normal rank
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine sediment metagenome / rank
 
Normal rank
Property / Ecosystem: marine sediment metagenome / qualifier
 
Prevalence (%): 0.3
Amount0.3
Unit1
Property / Ecosystem: marine sediment metagenome / qualifier
 
Relative abundance (%): 0.29
Amount0.29
Unit1
Property / Ecosystem
 
Property / Ecosystem: human lung metagenome / rank
 
Normal rank
Property / Ecosystem: human lung metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human lung metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: bovine gut metagenome / rank
 
Normal rank
Property / Ecosystem: bovine gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: bovine gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human skin metagenome / rank
 
Normal rank
Property / Ecosystem: human skin metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human skin metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human gut metagenome / rank
 
Normal rank
Property / Ecosystem: human gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / MAGs
 
Property / MAGs: no MAG matches found / rank
 
Normal rank

Latest revision as of 21:14, 15 August 2026

genome assembly
Language Label Description Also known as
default for all languages
No label defined
    English
    GCF_000016125.1
    genome assembly

      Statements

      no current description - please contribute here
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