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Property / Protologue of the species
 
no current description - please contribute here
Property / Protologue of the species: no current description - please contribute here / rank
 
Normal rank
Property / Instance of
 
Property / Instance of: Genome Assembly Accession / rank
 
Normal rank
Property / GTDB
 
Property / GTDB: Archaea / rank
 
Normal rank
Property / GTDB: Archaea / qualifier
 
Property / GTDB: Archaea / qualifier
 
Property / GTDB: Archaea / qualifier
 
Property / GTDB: Archaea / qualifier
 
Property / GTDB: Archaea / qualifier
 
Property / GTDB: Archaea / qualifier
 
Property / GTDB: Archaea / qualifier
 
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanomassiliicoccus luminyensis / rank
 
Normal rank
Property / Comparison to close relatives: Methanomassiliicoccus luminyensis / qualifier
 
16S Identity %: 28.21956368754398
Amount28.21956368754398
Unit1
Property / Comparison to close relatives: Methanomassiliicoccus luminyensis / qualifier
 
POCPu: 1.7634291915355398
Amount1.7634291915355398
Unit1
Property / Comparison to close relatives: Methanomassiliicoccus luminyensis / qualifier
 
G+C Difference (%): 28.049999999999997
Amount28.049999999999997
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Geotoga petraea / rank
 
Normal rank
Property / Comparison to close relatives: Geotoga petraea / qualifier
 
16S Identity %: 26.31578947368421
Amount26.31578947368421
Unit1
Property / Comparison to close relatives: Geotoga petraea / qualifier
 
POCPu: 0.7264687302590018
Amount0.7264687302590018
Unit1
Property / Comparison to close relatives: Geotoga petraea / qualifier
 
G+C Difference (%): 3.009999999999998
Amount3.009999999999998
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Thermotoga petrophila / rank
 
Normal rank
Property / Comparison to close relatives: Thermotoga petrophila / qualifier
 
16S Identity %: 26.10770279481936
Amount26.10770279481936
Unit1
Property / Comparison to close relatives: Thermotoga petrophila / qualifier
 
POCPu: 0.9313556398758192
Amount0.9313556398758192
Unit1
Property / Comparison to close relatives: Thermotoga petrophila / qualifier
 
G+C Difference (%): 13.670000000000002
Amount13.670000000000002
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Belliella marina / rank
 
Normal rank
Property / Comparison to close relatives: Belliella marina / qualifier
 
16S Identity %: 26.024442846872752
Amount26.024442846872752
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Thermotoga maritima / rank
 
Normal rank
Property / Comparison to close relatives: Thermotoga maritima / qualifier
 
16S Identity %: 25.971370143149286
Amount25.971370143149286
Unit1
Property / Comparison to close relatives: Thermotoga maritima / qualifier
 
POCPu: 0.9475465313028765
Amount0.9475465313028765
Unit1
Property / Comparison to close relatives: Thermotoga maritima / qualifier
 
G+C Difference (%): 13.82
Amount13.82
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Thermotoga neapolitana / rank
 
Normal rank
Property / Comparison to close relatives: Thermotoga neapolitana / qualifier
 
16S Identity %: 25.153374233128833
Amount25.153374233128833
Unit1
Property / Comparison to close relatives: Thermotoga neapolitana / qualifier
 
POCPu: 1.0319573901464714
Amount1.0319573901464714
Unit1
Property / Comparison to close relatives: Thermotoga neapolitana / qualifier
 
G+C Difference (%): 14.509999999999998
Amount14.509999999999998
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Chitinispirillum alkaliphilum / rank
 
Normal rank
Property / Comparison to close relatives: Chitinispirillum alkaliphilum / qualifier
 
16S Identity %: 24.877365101611773
Amount24.877365101611773
Unit1
Property / Comparison to close relatives: Chitinispirillum alkaliphilum / qualifier
 
POCPu: 0.6710002096875656
Amount0.6710002096875656
Unit1
Property / Comparison to close relatives: Chitinispirillum alkaliphilum / qualifier
 
G+C Difference (%): 10.490000000000002
Amount10.490000000000002
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Fervidobacterium thailandense / rank
 
Normal rank
Property / Comparison to close relatives: Fervidobacterium thailandense / qualifier
 
16S Identity %: 24.764663287472846
Amount24.764663287472846
Unit1
Property / Comparison to close relatives: Fervidobacterium thailandense / qualifier
 
POCPu: 0.6390850992263707
Amount0.6390850992263707
Unit1
Property / Comparison to close relatives: Fervidobacterium thailandense / qualifier
 
G+C Difference (%): 13.369999999999997
Amount13.369999999999997
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Fervidobacterium islandicum / rank
 
Normal rank
Property / Comparison to close relatives: Fervidobacterium islandicum / qualifier
 
16S Identity %: 24.501424501424502
Amount24.501424501424502
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Fervidobacterium pennivorans / rank
 
Normal rank
Property / Comparison to close relatives: Fervidobacterium pennivorans / qualifier
 
16S Identity %: 24.407252440725244
Amount24.407252440725244
Unit1
Property / Comparison to close relatives: Fervidobacterium pennivorans / qualifier
 
POCPu: 0.7741935483870968
Amount0.7741935483870968
Unit1
Property / Comparison to close relatives: Fervidobacterium pennivorans / qualifier
 
G+C Difference (%): 6.450000000000003
Amount6.450000000000003
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Fervidobacterium changbaicum / rank
 
Normal rank
Property / Comparison to close relatives: Fervidobacterium changbaicum / qualifier
 
16S Identity %: 23.737024221453286
Amount23.737024221453286
Unit1
Property / Comparison to close relatives: Fervidobacterium changbaicum / qualifier
 
POCPu: 0.8568708346556649
Amount0.8568708346556649
Unit1
Property / Comparison to close relatives: Fervidobacterium changbaicum / qualifier
 
G+C Difference (%): 8.29
Amount8.29
Unit1
Property / CAZyme
 
Property / CAZyme: GH28 / rank
 
Normal rank
Property / CAZyme: GH28 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GH13 / rank
 
Normal rank
Property / CAZyme: GH13 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GH0 / rank
 
Normal rank
Property / CAZyme: GH0 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT4 / rank
 
Normal rank
Property / CAZyme: GT4 / qualifier
 
Occurance: 4
Amount4
Unit1
Property / CAZyme
 
Property / CAZyme: GT66 / rank
 
Normal rank
Property / CAZyme: GT66 / qualifier
 
Occurance: 2
Amount2
Unit1
Property / CAZyme
 
Property / CAZyme: GT2 / rank
 
Normal rank
Property / CAZyme: GT2 / qualifier
 
Occurance: 9
Amount9
Unit1
Property / CAZyme
 
Property / CAZyme: GT1 / rank
 
Normal rank
Property / CAZyme: GT1 / qualifier
 
Occurance: 5
Amount5
Unit1
Property / CAZyme
 
Property / CAZyme: GT0 / rank
 
Normal rank
Property / CAZyme: GT0 / qualifier
 
Occurance: 4
Amount4
Unit1
Property / CAZyme
 
Property / CAZyme: GT15 / rank
 
Normal rank
Property / CAZyme: GT15 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT10 / rank
 
Normal rank
Property / CAZyme: GT10 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT8 / rank
 
Normal rank
Property / CAZyme: GT8 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: CBM50 / rank
 
Normal rank
Property / CAZyme: CBM50 / qualifier
 
Occurance: 5
Amount5
Unit1
Property / CAZyme
 
Property / CAZyme: CBM2 / rank
 
Normal rank
Property / CAZyme: CBM2 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / Pathway
 
Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / rank
 
Normal rank
Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / qualifier
 
Property / Pathway
 
Property / Pathway: Cysteine biosynthesis, serine => cysteine / rank
 
Normal rank
Property / Pathway: Cysteine biosynthesis, serine => cysteine / qualifier
 
Property / Pathway
 
Property / Pathway: Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine / rank
 
Normal rank
Property / Pathway: Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine / qualifier
 
Property / Pathway
 
Property / Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP / rank
 
Normal rank
Property / Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP / qualifier
 
Property / Pathway
 
Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / rank
 
Normal rank
Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / qualifier
 
Property / Pathway
 
Property / Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA / rank
 
Normal rank
Property / Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA / qualifier
 
Property / Pathway
 
Property / Pathway: GDP-L-Fuc biosynthesis, GDP-Man => GDP-L-Fuc / rank
 
Normal rank
Property / Pathway: GDP-L-Fuc biosynthesis, GDP-Man => GDP-L-Fuc / qualifier
 
Property / Pathway
 
Property / Pathway: Pyruvate:ferredoxin oxidoreductase / rank
 
Normal rank
Property / Pathway: Pyruvate:ferredoxin oxidoreductase / qualifier
 
Property / Pathway
 
Property / Pathway: Acetyl-CoA to acetate / rank
 
Normal rank
Property / Pathway: Acetyl-CoA to acetate / qualifier
 
Property / Ecosystem
 
Property / Ecosystem: insect gut metagenome / rank
 
Normal rank
Property / Ecosystem: insect gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: insect gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: mouse gut metagenome / rank
 
Normal rank
Property / Ecosystem: mouse gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: mouse gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human vaginal metagenome / rank
 
Normal rank
Property / Ecosystem: human vaginal metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human vaginal metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: freshwater metagenome / rank
 
Normal rank
Property / Ecosystem: freshwater metagenome / qualifier
 
Prevalence (%): 0.4
Amount0.4
Unit1
Property / Ecosystem: freshwater metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: coral metagenome / rank
 
Normal rank
Property / Ecosystem: coral metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: coral metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: pig gut metagenome / rank
 
Normal rank
Property / Ecosystem: pig gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: pig gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: chicken gut metagenome / rank
 
Normal rank
Property / Ecosystem: chicken gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: chicken gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine metagenome / rank
 
Normal rank
Property / Ecosystem: marine metagenome / qualifier
 
Prevalence (%): 0.2
Amount0.2
Unit1
Property / Ecosystem: marine metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: plant metagenome / rank
 
Normal rank
Property / Ecosystem: plant metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: plant metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: soil metagenome / rank
 
Normal rank
Property / Ecosystem: soil metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: soil metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human oral metagenome / rank
 
Normal rank
Property / Ecosystem: human oral metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human oral metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: activated sludge metagenome / rank
 
Normal rank
Property / Ecosystem: activated sludge metagenome / qualifier
 
Prevalence (%): 0.1
Amount0.1
Unit1
Property / Ecosystem: activated sludge metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: wastewater metagenome / rank
 
Normal rank
Property / Ecosystem: wastewater metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: wastewater metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: rhizosphere metagenome / rank
 
Normal rank
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine sediment metagenome / rank
 
Normal rank
Property / Ecosystem: marine sediment metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: marine sediment metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human lung metagenome / rank
 
Normal rank
Property / Ecosystem: human lung metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human lung metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: bovine gut metagenome / rank
 
Normal rank
Property / Ecosystem: bovine gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: bovine gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human skin metagenome / rank
 
Normal rank
Property / Ecosystem: human skin metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human skin metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human gut metagenome / rank
 
Normal rank
Property / Ecosystem: human gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / MAGs
 
Property / MAGs: no MAG matches found / rank
 
Normal rank

Latest revision as of 21:05, 15 August 2026

genome assembly
Language Label Description Also known as
default for all languages
No label defined
    English
    GCA_041659525.1
    genome assembly

      Statements

      no current description - please contribute here
      0 references
      28.21956368754398
      1.7634291915355398
      28.049999999999997
      0 references
      26.31578947368421
      0.7264687302590018
      3.009999999999998
      0 references
      26.10770279481936
      0.9313556398758192
      13.670000000000002
      0 references
      26.024442846872752
      0 references
      25.971370143149286
      0.9475465313028765
      0 references
      25.153374233128833
      1.0319573901464714
      14.509999999999998
      0 references
      24.877365101611773
      0.6710002096875656
      10.490000000000002
      0 references
      24.764663287472846
      0.6390850992263707
      13.369999999999997
      0 references
      0 references
      24.407252440725244
      0.7741935483870968
      6.450000000000003
      0 references
      23.737024221453286
      0.8568708346556649
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
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