GCA_041659525.1 (Q140562): Difference between revisions
Appearance
Created a new Item |
Created claim: MAGs (P28): no MAG matches found (Q42716) |
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| Property / Protologue of the species | |||||||
no current description - please contribute here | |||||||
| Property / Protologue of the species: no current description - please contribute here / rank | |||||||
Normal rank | |||||||
| Property / Instance of | |||||||
| Property / Instance of: Genome Assembly Accession / rank | |||||||
Normal rank | |||||||
| Property / GTDB | |||||||
| Property / GTDB: Archaea / rank | |||||||
Normal rank | |||||||
| Property / GTDB: Archaea / qualifier | |||||||
| Property / GTDB: Archaea / qualifier | |||||||
| Property / GTDB: Archaea / qualifier | |||||||
| Property / GTDB: Archaea / qualifier | |||||||
| Property / GTDB: Archaea / qualifier | |||||||
| Property / GTDB: Archaea / qualifier | |||||||
| Property / GTDB: Archaea / qualifier | |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanomassiliicoccus luminyensis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanomassiliicoccus luminyensis / qualifier | |||||||
16S Identity %: 28.21956368754398
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| Property / Comparison to close relatives: Methanomassiliicoccus luminyensis / qualifier | |||||||
POCPu: 1.7634291915355398
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| Property / Comparison to close relatives: Methanomassiliicoccus luminyensis / qualifier | |||||||
G+C Difference (%): 28.049999999999997
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Geotoga petraea / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Geotoga petraea / qualifier | |||||||
16S Identity %: 26.31578947368421
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| Property / Comparison to close relatives: Geotoga petraea / qualifier | |||||||
POCPu: 0.7264687302590018
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| Property / Comparison to close relatives: Geotoga petraea / qualifier | |||||||
G+C Difference (%): 3.009999999999998
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermotoga petrophila / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermotoga petrophila / qualifier | |||||||
16S Identity %: 26.10770279481936
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| Property / Comparison to close relatives: Thermotoga petrophila / qualifier | |||||||
POCPu: 0.9313556398758192
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| Property / Comparison to close relatives: Thermotoga petrophila / qualifier | |||||||
G+C Difference (%): 13.670000000000002
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Belliella marina / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Belliella marina / qualifier | |||||||
16S Identity %: 26.024442846872752
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermotoga maritima / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermotoga maritima / qualifier | |||||||
16S Identity %: 25.971370143149286
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| Property / Comparison to close relatives: Thermotoga maritima / qualifier | |||||||
POCPu: 0.9475465313028765
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| Property / Comparison to close relatives: Thermotoga maritima / qualifier | |||||||
G+C Difference (%): 13.82
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermotoga neapolitana / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermotoga neapolitana / qualifier | |||||||
16S Identity %: 25.153374233128833
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| Property / Comparison to close relatives: Thermotoga neapolitana / qualifier | |||||||
POCPu: 1.0319573901464714
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| Property / Comparison to close relatives: Thermotoga neapolitana / qualifier | |||||||
G+C Difference (%): 14.509999999999998
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Chitinispirillum alkaliphilum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Chitinispirillum alkaliphilum / qualifier | |||||||
16S Identity %: 24.877365101611773
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| Property / Comparison to close relatives: Chitinispirillum alkaliphilum / qualifier | |||||||
POCPu: 0.6710002096875656
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| Property / Comparison to close relatives: Chitinispirillum alkaliphilum / qualifier | |||||||
G+C Difference (%): 10.490000000000002
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Fervidobacterium thailandense / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Fervidobacterium thailandense / qualifier | |||||||
16S Identity %: 24.764663287472846
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| Property / Comparison to close relatives: Fervidobacterium thailandense / qualifier | |||||||
POCPu: 0.6390850992263707
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| Property / Comparison to close relatives: Fervidobacterium thailandense / qualifier | |||||||
G+C Difference (%): 13.369999999999997
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Fervidobacterium islandicum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Fervidobacterium islandicum / qualifier | |||||||
16S Identity %: 24.501424501424502
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Fervidobacterium pennivorans / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Fervidobacterium pennivorans / qualifier | |||||||
16S Identity %: 24.407252440725244
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| Property / Comparison to close relatives: Fervidobacterium pennivorans / qualifier | |||||||
POCPu: 0.7741935483870968
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| Property / Comparison to close relatives: Fervidobacterium pennivorans / qualifier | |||||||
G+C Difference (%): 6.450000000000003
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Fervidobacterium changbaicum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Fervidobacterium changbaicum / qualifier | |||||||
16S Identity %: 23.737024221453286
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| Property / Comparison to close relatives: Fervidobacterium changbaicum / qualifier | |||||||
POCPu: 0.8568708346556649
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| Property / Comparison to close relatives: Fervidobacterium changbaicum / qualifier | |||||||
G+C Difference (%): 8.29
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| Property / CAZyme | |||||||
| Property / CAZyme: GH28 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH28 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GH13 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH13 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GH0 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH0 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT4 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT4 / qualifier | |||||||
Occurance: 4
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| Property / CAZyme | |||||||
| Property / CAZyme: GT66 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT66 / qualifier | |||||||
Occurance: 2
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| Property / CAZyme | |||||||
| Property / CAZyme: GT2 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT2 / qualifier | |||||||
Occurance: 9
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT1 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT1 / qualifier | |||||||
Occurance: 5
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| Property / CAZyme | |||||||
| Property / CAZyme: GT0 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT0 / qualifier | |||||||
Occurance: 4
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| Property / CAZyme | |||||||
| Property / CAZyme: GT15 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT15 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT10 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT10 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT8 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT8 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: CBM50 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM50 / qualifier | |||||||
Occurance: 5
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| Property / CAZyme | |||||||
| Property / CAZyme: CBM2 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM2 / qualifier | |||||||
Occurance: 1
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| Property / Pathway | |||||||
| Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / rank | |||||||
Normal rank | |||||||
| Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Cysteine biosynthesis, serine => cysteine / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Cysteine biosynthesis, serine => cysteine / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: GDP-L-Fuc biosynthesis, GDP-Man => GDP-L-Fuc / rank | |||||||
Normal rank | |||||||
| Property / Pathway: GDP-L-Fuc biosynthesis, GDP-Man => GDP-L-Fuc / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Pyruvate:ferredoxin oxidoreductase / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Pyruvate:ferredoxin oxidoreductase / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Acetyl-CoA to acetate / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Acetyl-CoA to acetate / qualifier | |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: insect gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: mouse gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human vaginal metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: freshwater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Prevalence (%): 0.4
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| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: coral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: coral metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: coral metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: pig gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: chicken gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: marine metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine metagenome / qualifier | |||||||
Prevalence (%): 0.2
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| Property / Ecosystem: marine metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: plant metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: plant metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: plant metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: soil metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: soil metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: soil metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human oral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: activated sludge metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Prevalence (%): 0.1
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| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: wastewater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: rhizosphere metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: marine sediment metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human lung metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: bovine gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human skin metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / MAGs | |||||||
| Property / MAGs: no MAG matches found / rank | |||||||
Normal rank | |||||||
Latest revision as of 21:05, 15 August 2026
genome assembly
| Language | Label | Description | Also known as |
|---|---|---|---|
| default for all languages | No label defined |
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| English | GCA_041659525.1 |
genome assembly |
Statements
no current description - please contribute here
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