GCA_041659245.1 (Q140499): Difference between revisions
Appearance
Added qualifier: POCPu (P4): 1.2489762489762488 |
Created claim: MAGs (P28): no MAG matches found (Q42716) |
||||||
| (163 intermediate revisions by the same user not shown) | |||||||
| Property / Comparison to close relatives: Methanospirillum lacunae / qualifier | |||||||
G+C Difference (%): 3
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Halorubrum aquaticum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Halorubrum aquaticum / qualifier | |||||||
16S Identity %: 72.24126113776559
| |||||||
| Property / Comparison to close relatives: Halorubrum aquaticum / qualifier | |||||||
POCPu: 0.6742061765985211
| |||||||
| Property / Comparison to close relatives: Halorubrum aquaticum / qualifier | |||||||
G+C Difference (%): 27.270000000000003
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Halorubrum cibi / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Halorubrum cibi / qualifier | |||||||
16S Identity %: 72.03564084989719
| |||||||
| Property / Comparison to close relatives: Halorubrum cibi / qualifier | |||||||
POCPu: 0.6993006993006993
| |||||||
| Property / Comparison to close relatives: Halorubrum cibi / qualifier | |||||||
G+C Difference (%): 26.68999999999999
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanofollis aquaemaris / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanofollis aquaemaris / qualifier | |||||||
16S Identity %: 71.996879875195
| |||||||
| Property / Comparison to close relatives: Methanofollis aquaemaris / qualifier | |||||||
POCPu: 1.3909587680079483
| |||||||
| Property / Comparison to close relatives: Methanofollis aquaemaris / qualifier | |||||||
G+C Difference (%): 19.419999999999995
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Halorubrum aidingense / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Halorubrum aidingense / qualifier | |||||||
16S Identity %: 71.93702943189597
| |||||||
| Property / Comparison to close relatives: Halorubrum aidingense / qualifier | |||||||
POCPu: 0.5306212690692018
| |||||||
| Property / Comparison to close relatives: Halorubrum aidingense / qualifier | |||||||
G+C Difference (%): 27.059999999999995
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobacterium thermaggregans / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobacterium thermaggregans / qualifier | |||||||
16S Identity %: 71.91249117854622
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Halomicrobium mukohataei / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Halomicrobium mukohataei / qualifier | |||||||
16S Identity %: 71.90704032809296
| |||||||
| Property / Comparison to close relatives: Halomicrobium mukohataei / qualifier | |||||||
POCPu: 0.7405883563052871
| |||||||
| Property / Comparison to close relatives: Halomicrobium mukohataei / qualifier | |||||||
G+C Difference (%): 25.4
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Halorubrum depositum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Halorubrum depositum / qualifier | |||||||
16S Identity %: 71.64804469273743
| |||||||
| Property / Comparison to close relatives: Halorubrum depositum / qualifier | |||||||
POCPu: 0.60790273556231
| |||||||
| Property / Comparison to close relatives: Halorubrum depositum / qualifier | |||||||
G+C Difference (%): 28.499999999999993
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Halorubrum rubrum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Halorubrum rubrum / qualifier | |||||||
16S Identity %: 71.39917695473251
| |||||||
| Property / Comparison to close relatives: Halorubrum rubrum / qualifier | |||||||
POCPu: 0.6448839208942391
| |||||||
| Property / Comparison to close relatives: Halorubrum rubrum / qualifier | |||||||
G+C Difference (%): 27.71
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Halorubrum lipolyticum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Halorubrum lipolyticum / qualifier | |||||||
16S Identity %: 71.32101300479124
| |||||||
| Property / Comparison to close relatives: Halorubrum lipolyticum / qualifier | |||||||
POCPu: 0.6082214765100671
| |||||||
| Property / Comparison to close relatives: Halorubrum lipolyticum / qualifier | |||||||
G+C Difference (%): 27.880000000000003
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Halorubrum halodurans / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Halorubrum halodurans / qualifier | |||||||
16S Identity %: 71.29496402877697
| |||||||
| Property / Comparison to close relatives: Halorubrum halodurans / qualifier | |||||||
POCPu: 0.5474836807749
| |||||||
| Property / Comparison to close relatives: Halorubrum halodurans / qualifier | |||||||
G+C Difference (%): 27.509999999999998
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Halosimplex litoreum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Halosimplex litoreum / qualifier | |||||||
16S Identity %: 71.15516062884484
| |||||||
| Property / Comparison to close relatives: Halosimplex litoreum / qualifier | |||||||
POCPu: 0.41598842466992225
| |||||||
| Property / Comparison to close relatives: Halosimplex litoreum / qualifier | |||||||
G+C Difference (%): 28.32999999999999
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Vulcanisaeta distributa / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Vulcanisaeta distributa / qualifier | |||||||
16S Identity %: 71.10808973487424
| |||||||
| Property / Comparison to close relatives: Vulcanisaeta distributa / qualifier | |||||||
POCPu: 0.34619188921859545
| |||||||
| Property / Comparison to close relatives: Vulcanisaeta distributa / qualifier | |||||||
G+C Difference (%): 5.299999999999997
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Pyrobaculum calidifontis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Pyrobaculum calidifontis / qualifier | |||||||
16S Identity %: 71.0204081632653
| |||||||
| Property / Comparison to close relatives: Pyrobaculum calidifontis / qualifier | |||||||
POCPu: 0.5046480743691899
| |||||||
| Property / Comparison to close relatives: Pyrobaculum calidifontis / qualifier | |||||||
G+C Difference (%): 17.019999999999996
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Halomicroarcula rubra / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Halomicroarcula rubra / qualifier | |||||||
16S Identity %: 70.81005586592178
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Halorubrum rutilum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Halorubrum rutilum / qualifier | |||||||
16S Identity %: 70.43286867204695
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Vulcanisaeta thermophila / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Vulcanisaeta thermophila / qualifier | |||||||
16S Identity %: 70
| |||||||
| Property / Comparison to close relatives: Vulcanisaeta thermophila / qualifier | |||||||
POCPu: 0.4942339373970346
| |||||||
| Property / Comparison to close relatives: Vulcanisaeta thermophila / qualifier | |||||||
G+C Difference (%): 8.949999999999996
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanothermobacter wolfeii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanothermobacter wolfeii / qualifier | |||||||
POCPu: 2.680722891566265
| |||||||
| Property / Comparison to close relatives: Methanothermobacter wolfeii / qualifier | |||||||
G+C Difference (%): 8.54
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Halomicrobium katesii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Halomicrobium katesii / qualifier | |||||||
POCPu: 0.6232956758862486
| |||||||
| Property / Comparison to close relatives: Halomicrobium katesii / qualifier | |||||||
G+C Difference (%): 24.869999999999997
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Haloarcula rubra / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Haloarcula rubra / qualifier | |||||||
POCPu: 0.5110188438198658
| |||||||
| Property / Comparison to close relatives: Haloarcula rubra / qualifier | |||||||
G+C Difference (%): 24.270000000000003
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH23 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH23 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH28 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH28 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH0 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH0 / qualifier | |||||||
Occurance: 2
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH43 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH43 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT13 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT13 / qualifier | |||||||
Occurance: 2
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT66 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT66 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT4 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT4 / qualifier | |||||||
Occurance: 7
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT1 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT1 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT2 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT2 / qualifier | |||||||
Occurance: 14
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT9 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT9 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CE14 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CE14 / qualifier | |||||||
Occurance: 2
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM50 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM50 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / Pathway | |||||||
| Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / rank | |||||||
Normal rank | |||||||
| Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Coenzyme A biosynthesis, pantothenate => CoA / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Coenzyme A biosynthesis, pantothenate => CoA / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: GDP-D-Rha biosynthesis, GDP-Man => GDP-D-Rha / rank | |||||||
Normal rank | |||||||
| Property / Pathway: GDP-D-Rha biosynthesis, GDP-Man => GDP-D-Rha / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Methionine degradation I / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Methionine degradation I / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Pyruvate:ferredoxin oxidoreductase / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Pyruvate:ferredoxin oxidoreductase / qualifier | |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: insect gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: mouse gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human vaginal metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: freshwater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Prevalence (%): 1.8
| |||||||
| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Relative abundance (%): 0.01
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: coral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: coral metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: coral metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: pig gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: chicken gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: marine metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: marine metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: plant metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: plant metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: plant metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: soil metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: soil metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: soil metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human oral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: activated sludge metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: wastewater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: rhizosphere metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: marine sediment metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human lung metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: bovine gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human skin metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / MAGs | |||||||
| Property / MAGs: no MAG matches found / rank | |||||||
Normal rank | |||||||
Latest revision as of 20:51, 15 August 2026
genome assembly
| Language | Label | Description | Also known as |
|---|---|---|---|
| default for all languages | No label defined |
||
| English | GCA_041659245.1 |
genome assembly |
Statements
no current description - please contribute here
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references