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GCF_000013445.1 (Q139492): Difference between revisions

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Added qualifier: Relative abundance (%) (P19): 0
 
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Property / Comparison to close relatives: Methanogenium frigidum / qualifier
 
16S Identity %: 89.43758573388203
Amount89.43758573388203
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanogenium marinum / rank
 
Normal rank
Property / Comparison to close relatives: Methanogenium marinum / qualifier
 
16S Identity %: 89.40027894002789
Amount89.40027894002789
Unit1
Property / Comparison to close relatives: Methanogenium marinum / qualifier
 
POCPu: 28.32850940665702
Amount28.32850940665702
Unit1
Property / Comparison to close relatives: Methanogenium marinum / qualifier
 
G+C Difference (%): 3.030000000000001
Amount3.030000000000001
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanoregula formicica / rank
 
Normal rank
Property / Comparison to close relatives: Methanoregula formicica / qualifier
 
16S Identity %: 89.32664756446992
Amount89.32664756446992
Unit1
Property / Comparison to close relatives: Methanoregula formicica / qualifier
 
POCPu: 33.17414836039478
Amount33.17414836039478
Unit1
Property / Comparison to close relatives: Methanoregula formicica / qualifier
 
G+C Difference (%): 10.050000000000004
Amount10.050000000000004
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanogenium cariaci / rank
 
Normal rank
Property / Comparison to close relatives: Methanogenium cariaci / qualifier
 
16S Identity %: 89.23182441700959
Amount89.23182441700959
Unit1
Property / Comparison to close relatives: Methanogenium cariaci / qualifier
 
POCPu: 25.90748263661381
Amount25.90748263661381
Unit1
Property / Comparison to close relatives: Methanogenium cariaci / qualifier
 
G+C Difference (%): 6.910000000000004
Amount6.910000000000004
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanoplanus limicola / rank
 
Normal rank
Property / Comparison to close relatives: Methanoplanus limicola / qualifier
 
16S Identity %: 89.12594631796283
Amount89.12594631796283
Unit1
Property / Comparison to close relatives: Methanoplanus limicola / qualifier
 
POCPu: 30.502169869807812
Amount30.502169869807812
Unit1
Property / Comparison to close relatives: Methanoplanus limicola / qualifier
 
G+C Difference (%): 2.960000000000001
Amount2.960000000000001
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanoplanus endosymbiosus / rank
 
Normal rank
Property / Comparison to close relatives: Methanoplanus endosymbiosus / qualifier
 
16S Identity %: 89.0485968514716
Amount89.0485968514716
Unit1
Property / Comparison to close relatives: Methanoplanus endosymbiosus / qualifier
 
POCPu: 29.71592722630067
Amount29.71592722630067
Unit1
Property / Comparison to close relatives: Methanoplanus endosymbiosus / qualifier
 
G+C Difference (%): 2.8699999999999974
Amount2.8699999999999974
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanofollis liminatans / rank
 
Normal rank
Property / Comparison to close relatives: Methanofollis liminatans / qualifier
 
16S Identity %: 88.91947694425328
Amount88.91947694425328
Unit1
Property / Comparison to close relatives: Methanofollis liminatans / qualifier
 
POCPu: 35.119863013698634
Amount35.119863013698634
Unit1
Property / Comparison to close relatives: Methanofollis liminatans / qualifier
 
G+C Difference (%): 15.810000000000002
Amount15.810000000000002
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolacinia petrolearia / rank
 
Normal rank
Property / Comparison to close relatives: Methanolacinia petrolearia / qualifier
 
16S Identity %: 88.87372013651877
Amount88.87372013651877
Unit1
Property / Comparison to close relatives: Methanolacinia petrolearia / qualifier
 
POCPu: 31.238952273822918
Amount31.238952273822918
Unit1
Property / Comparison to close relatives: Methanolacinia petrolearia / qualifier
 
G+C Difference (%): 2.25
Amount2.25
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolacinia paynteri / rank
 
Normal rank
Property / Comparison to close relatives: Methanolacinia paynteri / qualifier
 
16S Identity %: 88.68525896414342
Amount88.68525896414342
Unit1
Property / Comparison to close relatives: Methanolacinia paynteri / qualifier
 
POCPu: 30.586705672029908
Amount30.586705672029908
Unit1
Property / Comparison to close relatives: Methanolacinia paynteri / qualifier
 
G+C Difference (%): 2.280000000000001
Amount2.280000000000001
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanoculleus palmolei / rank
 
Normal rank
Property / Comparison to close relatives: Methanoculleus palmolei / qualifier
 
16S Identity %: 88.67132867132868
Amount88.67132867132868
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanoculleus taiwanensis / rank
 
Normal rank
Property / Comparison to close relatives: Methanoculleus taiwanensis / qualifier
 
16S Identity %: 88.61386138613861
Amount88.61386138613861
Unit1
Property / Comparison to close relatives: Methanoculleus taiwanensis / qualifier
 
POCPu: 33.94797497530458
Amount33.94797497530458
Unit1
Property / Comparison to close relatives: Methanoculleus taiwanensis / qualifier
 
G+C Difference (%): 14.82
Amount14.82
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanoculleus marisnigri / rank
 
Normal rank
Property / Comparison to close relatives: Methanoculleus marisnigri / qualifier
 
16S Identity %: 88.59289617486338
Amount88.59289617486338
Unit1
Property / Comparison to close relatives: Methanoculleus marisnigri / qualifier
 
POCPu: 34.64218935917049
Amount34.64218935917049
Unit1
Property / Comparison to close relatives: Methanoculleus marisnigri / qualifier
 
G+C Difference (%): 16.910000000000004
Amount16.910000000000004
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanoculleus bourgensis / rank
 
Normal rank
Property / Comparison to close relatives: Methanoculleus bourgensis / qualifier
 
16S Identity %: 88.44621513944223
Amount88.44621513944223
Unit1
Property / Comparison to close relatives: Methanoculleus bourgensis / qualifier
 
POCPu: 33.27847267939434
Amount33.27847267939434
Unit1
Property / Comparison to close relatives: Methanoculleus bourgensis / qualifier
 
G+C Difference (%): 15.490000000000002
Amount15.490000000000002
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanofollis fontis / rank
 
Normal rank
Property / Comparison to close relatives: Methanofollis fontis / qualifier
 
16S Identity %: 88.39541547277938
Amount88.39541547277938
Unit1
Property / Comparison to close relatives: Methanofollis fontis / qualifier
 
POCPu: 32.77738764044944
Amount32.77738764044944
Unit1
Property / Comparison to close relatives: Methanofollis fontis / qualifier
 
G+C Difference (%): 14.39
Amount14.39
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanoculleus chikugoensis / rank
 
Normal rank
Property / Comparison to close relatives: Methanoculleus chikugoensis / qualifier
 
16S Identity %: 88.38348495451365
Amount88.38348495451365
Unit1
Property / Comparison to close relatives: Methanoculleus chikugoensis / qualifier
 
POCPu: 34.07914509934881
Amount34.07914509934881
Unit1
Property / Comparison to close relatives: Methanoculleus chikugoensis / qualifier
 
G+C Difference (%): 16.71
Amount16.71
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanovulcanius yangii / rank
 
Normal rank
Property / Comparison to close relatives: Methanovulcanius yangii / qualifier
 
16S Identity %: 88.32378223495702
Amount88.32378223495702
Unit1
Property / Comparison to close relatives: Methanovulcanius yangii / qualifier
 
POCPu: 31.84248039914469
Amount31.84248039914469
Unit1
Property / Comparison to close relatives: Methanovulcanius yangii / qualifier
 
G+C Difference (%): 11.079999999999998
Amount11.079999999999998
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanoculleus receptaculi / rank
 
Normal rank
Property / Comparison to close relatives: Methanoculleus receptaculi / qualifier
 
16S Identity %: 88.28358208955224
Amount88.28358208955224
Unit1
Property / Comparison to close relatives: Methanoculleus receptaculi / qualifier
 
POCPu: 34.6563763322308
Amount34.6563763322308
Unit1
Property / Comparison to close relatives: Methanoculleus receptaculi / qualifier
 
G+C Difference (%): 13.940000000000005
Amount13.940000000000005
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanoculleus sediminis / rank
 
Normal rank
Property / Comparison to close relatives: Methanoculleus sediminis / qualifier
 
16S Identity %: 88.2605583392985
Amount88.2605583392985
Unit1
Property / Comparison to close relatives: Methanoculleus sediminis / qualifier
 
POCPu: 34.57147725336514
Amount34.57147725336514
Unit1
Property / Comparison to close relatives: Methanoculleus sediminis / qualifier
 
G+C Difference (%): 17.15
Amount17.15
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanofollis formosanus / rank
 
Normal rank
Property / Comparison to close relatives: Methanofollis formosanus / qualifier
 
16S Identity %: 88.18958818958819
Amount88.18958818958819
Unit1
Property / Comparison to close relatives: Methanofollis formosanus / qualifier
 
POCPu: 32.53746089247489
Amount32.53746089247489
Unit1
Property / Comparison to close relatives: Methanofollis formosanus / qualifier
 
G+C Difference (%): 15.170000000000002
Amount15.170000000000002
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanoculleus horonobensis / rank
 
Normal rank
Property / Comparison to close relatives: Methanoculleus horonobensis / qualifier
 
16S Identity %: 88.0503144654088
Amount88.0503144654088
Unit1
Property / Comparison to close relatives: Methanoculleus horonobensis / qualifier
 
POCPu: 34.2641768031523
Amount34.2641768031523
Unit1
Property / Comparison to close relatives: Methanoculleus horonobensis / qualifier
 
G+C Difference (%): 16.89
Amount16.89
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanomicrobium antiquum / rank
 
Normal rank
Property / Comparison to close relatives: Methanomicrobium antiquum / qualifier
 
16S Identity %: 88.02867383512545
Amount88.02867383512545
Unit1
Property / Comparison to close relatives: Methanomicrobium antiquum / qualifier
 
POCPu: 31.890382265665913
Amount31.890382265665913
Unit1
Property / Comparison to close relatives: Methanomicrobium antiquum / qualifier
 
G+C Difference (%): 7.490000000000002
Amount7.490000000000002
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanocalculus pumilus / rank
 
Normal rank
Property / Comparison to close relatives: Methanocalculus pumilus / qualifier
 
16S Identity %: 88.01681850035038
Amount88.01681850035038
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanoculleus thermophilus / rank
 
Normal rank
Property / Comparison to close relatives: Methanoculleus thermophilus / qualifier
 
16S Identity %: 88
Amount88
Unit1
Property / Comparison to close relatives: Methanoculleus thermophilus / qualifier
 
POCPu: 34.264497878359265
Amount34.264497878359265
Unit1
Property / Comparison to close relatives: Methanoculleus thermophilus / qualifier
 
G+C Difference (%): 14.170000000000002
Amount14.170000000000002
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanofollis ethanolicus / rank
 
Normal rank
Property / Comparison to close relatives: Methanofollis ethanolicus / qualifier
 
16S Identity %: 87.8853046594982
Amount87.8853046594982
Unit1
Property / Comparison to close relatives: Methanofollis ethanolicus / qualifier
 
POCPu: 32.93729372937293
Amount32.93729372937293
Unit1
Property / Comparison to close relatives: Methanofollis ethanolicus / qualifier
 
G+C Difference (%): 15.18
Amount15.18
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanoculleus submarinus / rank
 
Normal rank
Property / Comparison to close relatives: Methanoculleus submarinus / qualifier
 
16S Identity %: 87.87661406025825
Amount87.87661406025825
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanocalculus halotolerans / rank
 
Normal rank
Property / Comparison to close relatives: Methanocalculus halotolerans / qualifier
 
16S Identity %: 87.87248787248787
Amount87.87248787248787
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanocalculus taiwanensis / rank
 
Normal rank
Property / Comparison to close relatives: Methanocalculus taiwanensis / qualifier
 
16S Identity %: 87.85714285714286
Amount87.85714285714286
Unit1
Property / Comparison to close relatives: Methanocalculus taiwanensis / qualifier
 
POCPu: 33.58510451431583
Amount33.58510451431583
Unit1
Property / Comparison to close relatives: Methanocalculus taiwanensis / qualifier
 
G+C Difference (%): 5.259999999999998
Amount5.259999999999998
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanocalculus alkaliphilus / rank
 
Normal rank
Property / Comparison to close relatives: Methanocalculus alkaliphilus / qualifier
 
16S Identity %: 87.84916201117319
Amount87.84916201117319
Unit1
Property / Comparison to close relatives: Methanocalculus alkaliphilus / qualifier
 
POCPu: 34.106436533621
Amount34.106436533621
Unit1
Property / Comparison to close relatives: Methanocalculus alkaliphilus / qualifier
 
G+C Difference (%): 8.009999999999998
Amount8.009999999999998
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanoculleus hydrogenitrophicus / rank
 
Normal rank
Property / Comparison to close relatives: Methanoculleus hydrogenitrophicus / qualifier
 
16S Identity %: 87.78785764131193
Amount87.78785764131193
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanocalculus natronophilus / rank
 
Normal rank
Property / Comparison to close relatives: Methanocalculus natronophilus / qualifier
 
16S Identity %: 87.71186440677965
Amount87.71186440677965
Unit1
Property / Comparison to close relatives: Methanocalculus natronophilus / qualifier
 
POCPu: 33.41315159329527
Amount33.41315159329527
Unit1
Property / Comparison to close relatives: Methanocalculus natronophilus / qualifier
 
G+C Difference (%): 6.280000000000001
Amount6.280000000000001
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanogenium organophilum / rank
 
Normal rank
Property / Comparison to close relatives: Methanogenium organophilum / qualifier
 
16S Identity %: 87.48231966053748
Amount87.48231966053748
Unit1
Property / Comparison to close relatives: Methanogenium organophilum / qualifier
 
POCPu: 31.218613993973886
Amount31.218613993973886
Unit1
Property / Comparison to close relatives: Methanogenium organophilum / qualifier
 
G+C Difference (%): 4.690000000000005
Amount4.690000000000005
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanofollis aquaemaris / rank
 
Normal rank
Property / Comparison to close relatives: Methanofollis aquaemaris / qualifier
 
16S Identity %: 87.38317757009347
Amount87.38317757009347
Unit1
Property / Comparison to close relatives: Methanofollis aquaemaris / qualifier
 
POCPu: 32.36479677527713
Amount32.36479677527713
Unit1
Property / Comparison to close relatives: Methanofollis aquaemaris / qualifier
 
G+C Difference (%): 14.399999999999999
Amount14.399999999999999
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanocalculus chunghsingensis / rank
 
Normal rank
Property / Comparison to close relatives: Methanocalculus chunghsingensis / qualifier
 
16S Identity %: 87.23064644852354
Amount87.23064644852354
Unit1
Property / Comparison to close relatives: Methanocalculus chunghsingensis / qualifier
 
POCPu: 34.22507579810951
Amount34.22507579810951
Unit1
Property / Comparison to close relatives: Methanocalculus chunghsingensis / qualifier
 
G+C Difference (%): 7.07
Amount7.07
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanofollis tationis / rank
 
Normal rank
Property / Comparison to close relatives: Methanofollis tationis / qualifier
 
16S Identity %: 86.97806086341117
Amount86.97806086341117
Unit1
Property / Comparison to close relatives: Methanofollis tationis / qualifier
 
POCPu: 34.97812773403325
Amount34.97812773403325
Unit1
Property / Comparison to close relatives: Methanofollis tationis / qualifier
 
G+C Difference (%): 15.990000000000002
Amount15.990000000000002
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanomicrobium mobile / rank
 
Normal rank
Property / Comparison to close relatives: Methanomicrobium mobile / qualifier
 
16S Identity %: 85.93856655290102
Amount85.93856655290102
Unit1
Property / Comparison to close relatives: Methanomicrobium mobile / qualifier
 
POCPu: 27.039395145244725
Amount27.039395145244725
Unit1
Property / Comparison to close relatives: Methanomicrobium mobile / qualifier
 
G+C Difference (%): 4.310000000000002
Amount4.310000000000002
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanocorpusculum sinense / rank
 
Normal rank
Property / Comparison to close relatives: Methanocorpusculum sinense / qualifier
 
16S Identity %: 85.76317590691306
Amount85.76317590691306
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanocorpusculum bavaricum / rank
 
Normal rank
Property / Comparison to close relatives: Methanocorpusculum bavaricum / qualifier
 
16S Identity %: 85.75361321403992
Amount85.75361321403992
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanocorpusculum labreanum / rank
 
Normal rank
Property / Comparison to close relatives: Methanocorpusculum labreanum / qualifier
 
16S Identity %: 85.29829545454545
Amount85.29829545454545
Unit1
Property / Comparison to close relatives: Methanocorpusculum labreanum / qualifier
 
POCPu: 25.23955538520506
Amount25.23955538520506
Unit1
Property / Comparison to close relatives: Methanocorpusculum labreanum / qualifier
 
G+C Difference (%): 4.859999999999999
Amount4.859999999999999
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanocorpusculum aggregans / rank
 
Normal rank
Property / Comparison to close relatives: Methanocorpusculum aggregans / qualifier
 
16S Identity %: 84.15841584158416
Amount84.15841584158416
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanothrix soehngenii / rank
 
Normal rank
Property / Comparison to close relatives: Methanothrix soehngenii / qualifier
 
16S Identity %: 83.17373461012312
Amount83.17373461012312
Unit1
Property / Comparison to close relatives: Methanothrix soehngenii / qualifier
 
POCPu: 12.13953488372093
Amount12.13953488372093
Unit1
Property / Comparison to close relatives: Methanothrix soehngenii / qualifier
 
G+C Difference (%): 5.840000000000003
Amount5.840000000000003
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanocella arvoryzae / rank
 
Normal rank
Property / Comparison to close relatives: Methanocella arvoryzae / qualifier
 
16S Identity %: 82.78688524590164
Amount82.78688524590164
Unit1
Property / Comparison to close relatives: Methanocella arvoryzae / qualifier
 
POCPu: 12.824052768829574
Amount12.824052768829574
Unit1
Property / Comparison to close relatives: Methanocella arvoryzae / qualifier
 
G+C Difference (%): 9.450000000000003
Amount9.450000000000003
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus bombayensis / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus bombayensis / qualifier
 
16S Identity %: 82.75154004106776
Amount82.75154004106776
Unit1
Property / Comparison to close relatives: Methanolobus bombayensis / qualifier
 
POCPu: 12.525929471836605
Amount12.525929471836605
Unit1
Property / Comparison to close relatives: Methanolobus bombayensis / qualifier
 
G+C Difference (%): 5.43
Amount5.43
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanocorpusculum parvum / rank
 
Normal rank
Property / Comparison to close relatives: Methanocorpusculum parvum / qualifier
 
POCPu: 25.9613507710326
Amount25.9613507710326
Unit1
Property / Comparison to close relatives: Methanocorpusculum parvum / qualifier
 
G+C Difference (%): 6.280000000000001
Amount6.280000000000001
Unit1
Property / Carbon source
 
Property / Carbon source: starch / rank
 
Normal rank
Property / CAZyme
 
Property / CAZyme: GH6 / rank
 
Normal rank
Property / CAZyme: GH6 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GH57 / rank
 
Normal rank
Property / CAZyme: GH57 / qualifier
 
Occurance: 2
Amount2
Unit1
Property / CAZyme
 
Property / CAZyme: GH43 / rank
 
Normal rank
Property / CAZyme: GH43 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GH77 / rank
 
Normal rank
Property / CAZyme: GH77 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GH39 / rank
 
Normal rank
Property / CAZyme: GH39 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GH13 / rank
 
Normal rank
Property / CAZyme: GH13 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GH26 / rank
 
Normal rank
Property / CAZyme: GH26 / qualifier
 
Occurance: 2
Amount2
Unit1
Property / CAZyme
 
Property / CAZyme: GH0 / rank
 
Normal rank
Property / CAZyme: GH0 / qualifier
 
Occurance: 6
Amount6
Unit1
Property / CAZyme
 
Property / CAZyme: GH19 / rank
 
Normal rank
Property / CAZyme: GH19 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT13 / rank
 
Normal rank
Property / CAZyme: GT13 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT66 / rank
 
Normal rank
Property / CAZyme: GT66 / qualifier
 
Occurance: 5
Amount5
Unit1
Property / CAZyme
 
Property / CAZyme: GT2 / rank
 
Normal rank
Property / CAZyme: GT2 / qualifier
 
Occurance: 26
Amount26
Unit1
Property / CAZyme
 
Property / CAZyme: GT35 / rank
 
Normal rank
Property / CAZyme: GT35 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT4 / rank
 
Normal rank
Property / CAZyme: GT4 / qualifier
 
Occurance: 26
Amount26
Unit1
Property / CAZyme
 
Property / CAZyme: GT22 / rank
 
Normal rank
Property / CAZyme: GT22 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT0 / rank
 
Normal rank
Property / CAZyme: GT0 / qualifier
 
Occurance: 6
Amount6
Unit1
Property / CAZyme
 
Property / CAZyme: CE14 / rank
 
Normal rank
Property / CAZyme: CE14 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: CBM6 / rank
 
Normal rank
Property / CAZyme: CBM6 / qualifier
 
Occurance: 10
Amount10
Unit1
Property / CAZyme
 
Property / CAZyme: CBM57 / rank
 
Normal rank
Property / CAZyme: CBM57 / qualifier
 
Occurance: 2
Amount2
Unit1
Property / CAZyme
 
Property / CAZyme: CBM50 / rank
 
Normal rank
Property / CAZyme: CBM50 / qualifier
 
Occurance: 9
Amount9
Unit1
Property / CAZyme
 
Property / CAZyme: CBM5 / rank
 
Normal rank
Property / CAZyme: CBM5 / qualifier
 
Occurance: 3
Amount3
Unit1
Property / CAZyme
 
Property / CAZyme: CBM13 / rank
 
Normal rank
Property / CAZyme: CBM13 / qualifier
 
Occurance: 4
Amount4
Unit1
Property / CAZyme
 
Property / CAZyme: CBM2 / rank
 
Normal rank
Property / CAZyme: CBM2 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / Pathway
 
Property / Pathway: Glycolysis, core module involving three-carbon compounds / rank
 
Normal rank
Property / Pathway: Glycolysis, core module involving three-carbon compounds / qualifier
 
Property / Pathway
 
Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / rank
 
Normal rank
Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / qualifier
 
Property / Pathway
 
Property / Pathway: Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine / rank
 
Normal rank
Property / Pathway: Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine / qualifier
 
Property / Pathway
 
Property / Pathway: Cysteine biosynthesis, serine => cysteine / rank
 
Normal rank
Property / Pathway: Cysteine biosynthesis, serine => cysteine / qualifier
 
Property / Pathway
 
Property / Pathway: Ornithine biosynthesis, glutamate => ornithine / rank
 
Normal rank
Property / Pathway: Ornithine biosynthesis, glutamate => ornithine / qualifier
 
Property / Pathway
 
Property / Pathway: Adenine ribonucleotide biosynthesis, IMP => ADP, ATP / rank
 
Normal rank
Property / Pathway: Adenine ribonucleotide biosynthesis, IMP => ADP, ATP / qualifier
 
Property / Pathway
 
Property / Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP / rank
 
Normal rank
Property / Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP / qualifier
 
Property / Pathway
 
Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / rank
 
Normal rank
Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / qualifier
 
Property / Pathway
 
Property / Pathway: Acylglycerol degradation / rank
 
Normal rank
Property / Pathway: Acylglycerol degradation / qualifier
 
Property / Pathway
 
Property / Pathway: NAD biosynthesis, aspartate => quinolinate => NAD / rank
 
Normal rank
Property / Pathway: NAD biosynthesis, aspartate => quinolinate => NAD / qualifier
 
Property / Pathway
 
Property / Pathway: Coenzyme A biosynthesis, pantothenate => CoA / rank
 
Normal rank
Property / Pathway: Coenzyme A biosynthesis, pantothenate => CoA / qualifier
 
Property / Pathway
 
Property / Pathway: V/A-type ATPase, prokaryotes / rank
 
Normal rank
Property / Pathway: V/A-type ATPase, prokaryotes / qualifier
 
Property / Pathway
 
Property / Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA / rank
 
Normal rank
Property / Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA / qualifier
 
Property / Pathway
 
Property / Pathway: F420 biosynthesis, archaea / rank
 
Normal rank
Property / Pathway: F420 biosynthesis, archaea / qualifier
 
Property / Pathway
 
Property / Pathway: Acetyl-CoA pathway, CO2 => acetyl-CoA / rank
 
Normal rank
Property / Pathway: Acetyl-CoA pathway, CO2 => acetyl-CoA / qualifier
 
Property / Pathway
 
Property / Pathway: Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate / rank
 
Normal rank
Property / Pathway: Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate / qualifier
 
Property / Pathway
 
Property / Pathway: Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine / rank
 
Normal rank
Property / Pathway: Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine / qualifier
 
Property / Pathway
 
Property / Pathway: Isoleucine biosynthesis, pyruvate => 2-oxobutanoate / rank
 
Normal rank
Property / Pathway: Isoleucine biosynthesis, pyruvate => 2-oxobutanoate / qualifier
 
Property / Pathway
 
Property / Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc / rank
 
Normal rank
Property / Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc / qualifier
 
Property / Pathway
 
Property / Pathway: Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine / rank
 
Normal rank
Property / Pathway: Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine / qualifier
 
Property / Pathway
 
Property / Pathway: Pentose phosphate pathway, archaea, fructose 6P => ribose 5P / rank
 
Normal rank
Property / Pathway: Pentose phosphate pathway, archaea, fructose 6P => ribose 5P / qualifier
 
Property / Pathway
 
Property / Pathway: dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha / rank
 
Normal rank
Property / Pathway: dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha / qualifier
 
Property / Pathway
 
Property / Pathway: Arginine biosynthesis, ornithine => arginine / rank
 
Normal rank
Property / Pathway: Arginine biosynthesis, ornithine => arginine / qualifier
 
Property / Pathway
 
Property / Pathway: Thiamine salvage pathway, HMP/HET => TMP / rank
 
Normal rank
Property / Pathway: Thiamine salvage pathway, HMP/HET => TMP / qualifier
 
Property / Pathway
 
Property / Pathway: Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P / rank
 
Normal rank
Property / Pathway: Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P / qualifier
 
Property / Pathway
 
Property / Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man / rank
 
Normal rank
Property / Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man / qualifier
 
Property / Pathway
 
Property / Pathway: UDP-Galf biosynthesis, UDP-Glc => UDP-Galf / rank
 
Normal rank
Property / Pathway: UDP-Galf biosynthesis, UDP-Glc => UDP-Galf / qualifier
 
Property / Pathway
 
Property / Pathway: GDP-D-Rha biosynthesis, GDP-Man => GDP-D-Rha / rank
 
Normal rank
Property / Pathway: GDP-D-Rha biosynthesis, GDP-Man => GDP-D-Rha / qualifier
 
Property / Pathway
 
Property / Pathway: Pentose bisphosphate pathway (nucleoside degradation), archaea, nucleoside/NMP => 3-PGA/glycerone phosphate / rank
 
Normal rank
Property / Pathway: Pentose bisphosphate pathway (nucleoside degradation), archaea, nucleoside/NMP => 3-PGA/glycerone phosphate / qualifier
 
Property / Pathway
 
Property / Pathway: Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor / rank
 
Normal rank
Property / Pathway: Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor / qualifier
 
Property / Pathway
 
Property / Pathway: De novo purine biosynthesis, PRPP + glutamine => IMP / rank
 
Normal rank
Property / Pathway: De novo purine biosynthesis, PRPP + glutamine => IMP / qualifier
 
Property / Pathway
 
Property / Pathway: Methanogenesis, CO2 => methane / rank
 
Normal rank
Property / Pathway: Methanogenesis, CO2 => methane / qualifier
 
Property / Pathway
 
Property / Pathway: Methanogenesis, acetate => methane / rank
 
Normal rank
Property / Pathway: Methanogenesis, acetate => methane / qualifier
 
Property / Pathway
 
Property / Pathway: Mannose degradation / rank
 
Normal rank
Property / Pathway: Mannose degradation / qualifier
 
Property / Pathway
 
Property / Pathway: Aspartate degradation I / rank
 
Normal rank
Property / Pathway: Aspartate degradation I / qualifier
 
Property / Pathway
 
Property / Pathway: Alanine degradation II / rank
 
Normal rank
Property / Pathway: Alanine degradation II / qualifier
 
Property / Pathway
 
Property / Pathway: Glutamine degradation II / rank
 
Normal rank
Property / Pathway: Glutamine degradation II / qualifier
 
Property / Pathway
 
Property / Pathway: Glycolysis (pay-off phase) / rank
 
Normal rank
Property / Pathway: Glycolysis (pay-off phase) / qualifier
 
Property / Pathway
 
Property / Pathway: Pyruvate:ferredoxin oxidoreductase / rank
 
Normal rank
Property / Pathway: Pyruvate:ferredoxin oxidoreductase / qualifier
 
Property / Pathway
 
Property / Pathway: Acetate to acetyl-CoA / rank
 
Normal rank
Property / Pathway: Acetate to acetyl-CoA / qualifier
 
Property / Pathway
 
Property / Pathway: Hydrogen metabolism / rank
 
Normal rank
Property / Pathway: Hydrogen metabolism / qualifier
 
Property / Pathway
 
Property / Pathway: Methanogenesis - methyl-coM / rank
 
Normal rank
Property / Pathway: Methanogenesis - methyl-coM / qualifier
 
Property / Pathway
 
Property / Pathway: Methanogenesis from carbon dioxide / rank
 
Normal rank
Property / Pathway: Methanogenesis from carbon dioxide / qualifier
 
Property / Ecosystem
 
Property / Ecosystem: insect gut metagenome / rank
 
Normal rank
Property / Ecosystem: insect gut metagenome / qualifier
 
Prevalence (%): 0.1
Amount0.1
Unit1
Property / Ecosystem: insect gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: mouse gut metagenome / rank
 
Normal rank
Property / Ecosystem: mouse gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: mouse gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human vaginal metagenome / rank
 
Normal rank
Property / Ecosystem: human vaginal metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human vaginal metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: freshwater metagenome / rank
 
Normal rank
Property / Ecosystem: freshwater metagenome / qualifier
 
Prevalence (%): 1.8
Amount1.8
Unit1
Property / Ecosystem: freshwater metagenome / qualifier
 
Relative abundance (%): 0.03
Amount0.03
Unit1
Property / Ecosystem
 
Property / Ecosystem: coral metagenome / rank
 
Normal rank
Property / Ecosystem: coral metagenome / qualifier
 
Prevalence (%): 0.7
Amount0.7
Unit1
Property / Ecosystem: coral metagenome / qualifier
 
Relative abundance (%): 0.06
Amount0.06
Unit1
Property / Ecosystem
 
Property / Ecosystem: pig gut metagenome / rank
 
Normal rank
Property / Ecosystem: pig gut metagenome / qualifier
 
Prevalence (%): 0.1
Amount0.1
Unit1
Property / Ecosystem: pig gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: chicken gut metagenome / rank
 
Normal rank
Property / Ecosystem: chicken gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: chicken gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine metagenome / rank
 
Normal rank
Property / Ecosystem: marine metagenome / qualifier
 
Prevalence (%): 0.2
Amount0.2
Unit1
Property / Ecosystem: marine metagenome / qualifier
 
Relative abundance (%): 0.03
Amount0.03
Unit1
Property / Ecosystem
 
Property / Ecosystem: plant metagenome / rank
 
Normal rank
Property / Ecosystem: plant metagenome / qualifier
 
Prevalence (%): 0.2
Amount0.2
Unit1
Property / Ecosystem: plant metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: soil metagenome / rank
 
Normal rank
Property / Ecosystem: soil metagenome / qualifier
 
Prevalence (%): 0.5
Amount0.5
Unit1
Property / Ecosystem: soil metagenome / qualifier
 
Relative abundance (%): 0.08
Amount0.08
Unit1
Property / Ecosystem
 
Property / Ecosystem: human oral metagenome / rank
 
Normal rank
Property / Ecosystem: human oral metagenome / qualifier
 
Prevalence (%): 0.1
Amount0.1
Unit1
Property / Ecosystem: human oral metagenome / qualifier
 
Relative abundance (%): 0.26
Amount0.26
Unit1
Property / Ecosystem
 
Property / Ecosystem: activated sludge metagenome / rank
 
Normal rank
Property / Ecosystem: activated sludge metagenome / qualifier
 
Prevalence (%): 9.2
Amount9.2
Unit1
Property / Ecosystem: activated sludge metagenome / qualifier
 
Relative abundance (%): 4.18
Amount4.18
Unit1
Property / Ecosystem
 
Property / Ecosystem: wastewater metagenome / rank
 
Normal rank
Property / Ecosystem: wastewater metagenome / qualifier
 
Prevalence (%): 4.6
Amount4.6
Unit1
Property / Ecosystem: wastewater metagenome / qualifier
 
Relative abundance (%): 0.93
Amount0.93
Unit1
Property / Ecosystem
 
Property / Ecosystem: rhizosphere metagenome / rank
 
Normal rank
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Prevalence (%): 0.5
Amount0.5
Unit1
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Relative abundance (%): 0.02
Amount0.02
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine sediment metagenome / rank
 
Normal rank
Property / Ecosystem: marine sediment metagenome / qualifier
 
Prevalence (%): 0.4
Amount0.4
Unit1
Property / Ecosystem: marine sediment metagenome / qualifier
 
Relative abundance (%): 0.22
Amount0.22
Unit1
Property / Ecosystem
 
Property / Ecosystem: human lung metagenome / rank
 
Normal rank
Property / Ecosystem: human lung metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human lung metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: bovine gut metagenome / rank
 
Normal rank
Property / Ecosystem: bovine gut metagenome / qualifier
 
Prevalence (%): 0.1
Amount0.1
Unit1
Property / Ecosystem: bovine gut metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: human skin metagenome / rank
 
Normal rank
Property / Ecosystem: human skin metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human skin metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human gut metagenome / rank
 
Normal rank
Property / Ecosystem: human gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1

Latest revision as of 16:56, 15 August 2026

genome assembly
Language Label Description Also known as
default for all languages
No label defined
    English
    GCF_000013445.1
    genome assembly

      Statements

      no current description - please contribute here
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