GCA_023659975.1 (Q138979): Difference between revisions
Appearance
Added qualifier: 16S Identity % (P3): 24.878387769284224 |
Created claim: MAGs (P28): no MAG matches found (Q42716) |
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| (154 intermediate revisions by the same user not shown) | |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Nitrosopumilus adriaticus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Nitrosopumilus adriaticus / qualifier | |||||||
16S Identity %: 24.86111111111111
| |||||||
| Property / Comparison to close relatives: Nitrosopumilus adriaticus / qualifier | |||||||
POCPu: 0.5289256198347108
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| Property / Comparison to close relatives: Nitrosopumilus adriaticus / qualifier | |||||||
G+C Difference (%): 2.0299999999999976
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Halorussus litoreus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Halorussus litoreus / qualifier | |||||||
16S Identity %: 24.80889506601807
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| Property / Comparison to close relatives: Halorussus litoreus / qualifier | |||||||
POCPu: 0.30782761653474056
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| Property / Comparison to close relatives: Halorussus litoreus / qualifier | |||||||
G+C Difference (%): 34.510000000000005
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Nitrosopumilus piranensis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Nitrosopumilus piranensis / qualifier | |||||||
16S Identity %: 24.791666666666668
| |||||||
| Property / Comparison to close relatives: Nitrosopumilus piranensis / qualifier | |||||||
POCPu: 0.4731328151402501
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| Property / Comparison to close relatives: Nitrosopumilus piranensis / qualifier | |||||||
G+C Difference (%): 2.4400000000000013
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Haladaptatus halobius / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Haladaptatus halobius / qualifier | |||||||
16S Identity %: 24.781976744186046
| |||||||
| Property / Comparison to close relatives: Haladaptatus halobius / qualifier | |||||||
POCPu: 0.24572768904277897
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| Property / Comparison to close relatives: Haladaptatus halobius / qualifier | |||||||
G+C Difference (%): 26.31
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Halorussus ruber / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Halorussus ruber / qualifier | |||||||
16S Identity %: 24.461431549687283
| |||||||
| Property / Comparison to close relatives: Halorussus ruber / qualifier | |||||||
POCPu: 0.370442581399883
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| Property / Comparison to close relatives: Halorussus ruber / qualifier | |||||||
G+C Difference (%): 32.790000000000006
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Halocalculus aciditolerans / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Halocalculus aciditolerans / qualifier | |||||||
16S Identity %: 24.23611111111111
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| Property / Comparison to close relatives: Halocalculus aciditolerans / qualifier | |||||||
POCPu: 0.35104142288790074
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| Property / Comparison to close relatives: Halocalculus aciditolerans / qualifier | |||||||
G+C Difference (%): 35.53
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Halobaculum salinum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Halobaculum salinum / qualifier | |||||||
16S Identity %: 24.061196105702365
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobrevibacter smithii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobrevibacter smithii / qualifier | |||||||
16S Identity %: 23.961218836565095
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| Property / Comparison to close relatives: Methanobrevibacter smithii / qualifier | |||||||
POCPu: 1.5414258188824663
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| Property / Comparison to close relatives: Methanobrevibacter smithii / qualifier | |||||||
G+C Difference (%): 0.34999999999999787
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Haloglomus irregulare / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Haloglomus irregulare / qualifier | |||||||
16S Identity %: 23.77521613832853
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| Property / Comparison to close relatives: Haloglomus irregulare / qualifier | |||||||
POCPu: 0.29251984956122024
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| Property / Comparison to close relatives: Haloglomus irregulare / qualifier | |||||||
G+C Difference (%): 36.68000000000001
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Halorarius halobius / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Halorarius halobius / qualifier | |||||||
16S Identity %: 23.763066202090595
| |||||||
| Property / Comparison to close relatives: Halorarius halobius / qualifier | |||||||
POCPu: 0.2818489289740699
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| Property / Comparison to close relatives: Halorarius halobius / qualifier | |||||||
G+C Difference (%): 35.44
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Halalkalicoccus paucihalophilus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Halalkalicoccus paucihalophilus / qualifier | |||||||
16S Identity %: 23.349548297428772
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| Property / Comparison to close relatives: Halalkalicoccus paucihalophilus / qualifier | |||||||
POCPu: 0.28072989773410867
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| Property / Comparison to close relatives: Halalkalicoccus paucihalophilus / qualifier | |||||||
G+C Difference (%): 30.290000000000003
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Halorientalis litorea / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Halorientalis litorea / qualifier | |||||||
16S Identity %: 23.349548297428772
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| Property / Comparison to close relatives: Halorientalis litorea / qualifier | |||||||
POCPu: 0.3389830508474576
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| Property / Comparison to close relatives: Halorientalis litorea / qualifier | |||||||
G+C Difference (%): 33.95
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Halalkalicoccus jeotgali / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Halalkalicoccus jeotgali / qualifier | |||||||
16S Identity %: 23.1410701876303
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| Property / Comparison to close relatives: Halalkalicoccus jeotgali / qualifier | |||||||
POCPu: 0.35834738617200673
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| Property / Comparison to close relatives: Halalkalicoccus jeotgali / qualifier | |||||||
G+C Difference (%): 31.140000000000004
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Haladaptatus pallidirubidus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Haladaptatus pallidirubidus / qualifier | |||||||
16S Identity %: 22.815533980582526
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| Property / Comparison to close relatives: Haladaptatus pallidirubidus / qualifier | |||||||
POCPu: 0.22368421052631576
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| Property / Comparison to close relatives: Haladaptatus pallidirubidus / qualifier | |||||||
G+C Difference (%): 24.669999999999998
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Saliphagus infecundisoli / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Saliphagus infecundisoli / qualifier | |||||||
16S Identity %: 22.5
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| Property / Comparison to close relatives: Saliphagus infecundisoli / qualifier | |||||||
POCPu: 0.2226758211170904
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| Property / Comparison to close relatives: Saliphagus infecundisoli / qualifier | |||||||
G+C Difference (%): 32.82000000000001
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Halorarum salinum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Halorarum salinum / qualifier | |||||||
POCPu: 0.37189273830495206
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| Property / Comparison to close relatives: Halorarum salinum / qualifier | |||||||
G+C Difference (%): 37.27000000000001
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| Property / CAZyme | |||||||
| Property / CAZyme: GH38 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH38 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GH57 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH57 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GH0 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH0 / qualifier | |||||||
Occurance: 2
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| Property / CAZyme | |||||||
| Property / CAZyme: GT13 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT13 / qualifier | |||||||
Occurance: 2
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| Property / CAZyme | |||||||
| Property / CAZyme: GT4 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT4 / qualifier | |||||||
Occurance: 4
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| Property / CAZyme | |||||||
| Property / CAZyme: GT2 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT2 / qualifier | |||||||
Occurance: 7
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| Property / CAZyme | |||||||
| Property / CAZyme: GT0 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT0 / qualifier | |||||||
Occurance: 2
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| Property / CAZyme | |||||||
| Property / CAZyme: GT66 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT66 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT55 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT55 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: CE14 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CE14 / qualifier | |||||||
Occurance: 2
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| Property / CAZyme | |||||||
| Property / CAZyme: CBM50 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM50 / qualifier | |||||||
Occurance: 2
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| Property / Pathway | |||||||
| Property / Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc / rank | |||||||
Normal rank | |||||||
| Property / Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man / rank | |||||||
Normal rank | |||||||
| Property / Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: UDP-Galf biosynthesis, UDP-Glc => UDP-Galf / rank | |||||||
Normal rank | |||||||
| Property / Pathway: UDP-Galf biosynthesis, UDP-Glc => UDP-Galf / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Mannose degradation / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Mannose degradation / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Acetate to acetyl-CoA / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Acetate to acetyl-CoA / qualifier | |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: insect gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: mouse gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human vaginal metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: freshwater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: coral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: coral metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: coral metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: pig gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: chicken gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: marine metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: marine metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: plant metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: plant metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: plant metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: soil metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: soil metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: soil metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human oral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: activated sludge metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: wastewater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: rhizosphere metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: marine sediment metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human lung metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: bovine gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human skin metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / MAGs | |||||||
| Property / MAGs: no MAG matches found / rank | |||||||
Normal rank | |||||||
Latest revision as of 15:36, 15 August 2026
genome assembly
| Language | Label | Description | Also known as |
|---|---|---|---|
| default for all languages | No label defined |
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| English | GCA_023659975.1 |
genome assembly |
Statements
no current description - please contribute here
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