GCA_041640075.1 (Q138028): Difference between revisions
Appearance
Added qualifier: G+C Difference (%) (P22): 10.259999999999998 |
Created claim: MAGs (P28): no MAG matches found (Q42716) |
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanocalculus alkaliphilus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanocalculus alkaliphilus / qualifier | |||||||
16S Identity %: 71.19831814996496
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| Property / Comparison to close relatives: Methanocalculus alkaliphilus / qualifier | |||||||
POCPu: 1.6682113067655238
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| Property / Comparison to close relatives: Methanocalculus alkaliphilus / qualifier | |||||||
G+C Difference (%): 7.189999999999998
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanoculleus palmolei / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanoculleus palmolei / qualifier | |||||||
16S Identity %: 71.08771929824562
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanomethylovorans hollandica / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanomethylovorans hollandica / qualifier | |||||||
16S Identity %: 70.97222222222223
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| Property / Comparison to close relatives: Methanomethylovorans hollandica / qualifier | |||||||
POCPu: 1.9655358104469574
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| Property / Comparison to close relatives: Methanomethylovorans hollandica / qualifier | |||||||
G+C Difference (%): 4.100000000000001
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanocalculus natronophilus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanocalculus natronophilus / qualifier | |||||||
16S Identity %: 70.87172218284904
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| Property / Comparison to close relatives: Methanocalculus natronophilus / qualifier | |||||||
POCPu: 1.5463917525773196
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| Property / Comparison to close relatives: Methanocalculus natronophilus / qualifier | |||||||
G+C Difference (%): 5.460000000000001
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanofollis ethanolicus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanofollis ethanolicus / qualifier | |||||||
16S Identity %: 70.83333333333334
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| Property / Comparison to close relatives: Methanofollis ethanolicus / qualifier | |||||||
POCPu: 1.2315930388219545
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| Property / Comparison to close relatives: Methanofollis ethanolicus / qualifier | |||||||
G+C Difference (%): 14.36
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanofollis fontis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanofollis fontis / qualifier | |||||||
16S Identity %: 70.74047447879224
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| Property / Comparison to close relatives: Methanofollis fontis / qualifier | |||||||
POCPu: 1.3942450311480272
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| Property / Comparison to close relatives: Methanofollis fontis / qualifier | |||||||
G+C Difference (%): 13.57
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanomethylovorans thermophila / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanomethylovorans thermophila / qualifier | |||||||
16S Identity %: 70.69219440353461
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanomicrobium mobile / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanomicrobium mobile / qualifier | |||||||
16S Identity %: 70.47945205479452
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| Property / Comparison to close relatives: Methanomicrobium mobile / qualifier | |||||||
POCPu: 1.5920029618659755
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| Property / Comparison to close relatives: Methanomicrobium mobile / qualifier | |||||||
G+C Difference (%): 3.490000000000002
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanofollis aquaemaris / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanofollis aquaemaris / qualifier | |||||||
16S Identity %: 70.30397505845674
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| Property / Comparison to close relatives: Methanofollis aquaemaris / qualifier | |||||||
POCPu: 1.5982364287682558
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| Property / Comparison to close relatives: Methanofollis aquaemaris / qualifier | |||||||
G+C Difference (%): 13.579999999999998
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanomethylovorans uponensis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanomethylovorans uponensis / qualifier | |||||||
16S Identity %: 69.80448950036205
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanofollis tationis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanofollis tationis / qualifier | |||||||
16S Identity %: 69.53125
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| Property / Comparison to close relatives: Methanofollis tationis / qualifier | |||||||
POCPu: 1.6519174041297935
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| Property / Comparison to close relatives: Methanofollis tationis / qualifier | |||||||
G+C Difference (%): 15.170000000000002
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| Property / Carbon source | |||||||
| Property / Carbon source: starch / rank | |||||||
Normal rank | |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH28 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH28 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GH0 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH0 / qualifier | |||||||
Occurance: 2
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| Property / CAZyme | |||||||
| Property / CAZyme: GH13 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH13 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GH57 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH57 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT13 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT13 / qualifier | |||||||
Occurance: 2
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| Property / CAZyme | |||||||
| Property / CAZyme: GT66 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT66 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT3 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT3 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT35 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT35 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT2 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT2 / qualifier | |||||||
Occurance: 5
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| Property / CAZyme | |||||||
| Property / CAZyme: GT4 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT4 / qualifier | |||||||
Occurance: 5
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| Property / CAZyme | |||||||
| Property / CAZyme: CE14 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CE14 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: CBM50 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM50 / qualifier | |||||||
Occurance: 3
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| Property / Pathway | |||||||
| Property / Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Lycopene biosynthesis, geranylgeranyl-PP => lycopene / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Lycopene biosynthesis, geranylgeranyl-PP => lycopene / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Lactate production / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Lactate production / qualifier | |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: insect gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: mouse gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human vaginal metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: freshwater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: coral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: coral metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: coral metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: pig gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: chicken gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: marine metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: marine metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: plant metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: plant metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: plant metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: soil metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: soil metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: soil metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human oral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: activated sludge metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: wastewater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: rhizosphere metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: marine sediment metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Prevalence (%): 0.1
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| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Relative abundance (%): 0.01
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human lung metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: bovine gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human skin metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / MAGs | |||||||
| Property / MAGs: no MAG matches found / rank | |||||||
Normal rank | |||||||
Latest revision as of 13:23, 15 August 2026
genome assembly
| Language | Label | Description | Also known as |
|---|---|---|---|
| default for all languages | No label defined |
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| English | GCA_041640075.1 |
genome assembly |
Statements
no current description - please contribute here
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