GCA_041631255.1 (Q137689): Difference between revisions
Appearance
Added qualifier: 16S Identity % (P3): 71.9749652294854 |
Created claim: MAGs (P28): no MAG matches found (Q42716) |
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| Property / Comparison to close relatives: Natronomonas pharaonis / qualifier | |||||||
POCPu: 0.5335365853658537
| |||||||
| Property / Comparison to close relatives: Natronomonas pharaonis / qualifier | |||||||
G+C Difference (%): 33.129999999999995
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanothermobacter tenebrarum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanothermobacter tenebrarum / qualifier | |||||||
16S Identity %: 71.95652173913044
| |||||||
| Property / Comparison to close relatives: Methanothermobacter tenebrarum / qualifier | |||||||
POCPu: 1.550387596899225
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| Property / Comparison to close relatives: Methanothermobacter tenebrarum / qualifier | |||||||
G+C Difference (%): 12.059999999999999
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanosphaera stadtmanae / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanosphaera stadtmanae / qualifier | |||||||
16S Identity %: 71.8728403593642
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| Property / Comparison to close relatives: Methanosphaera stadtmanae / qualifier | |||||||
POCPu: 1.5536187949981053
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| Property / Comparison to close relatives: Methanosphaera stadtmanae / qualifier | |||||||
G+C Difference (%): 2.3599999999999994
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobacterium petrolearium / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobacterium petrolearium / qualifier | |||||||
16S Identity %: 71.8475073313783
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| Property / Comparison to close relatives: Methanobacterium petrolearium / qualifier | |||||||
POCPu: 1.0758941552776968
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| Property / Comparison to close relatives: Methanobacterium petrolearium / qualifier | |||||||
G+C Difference (%): 7.780000000000005
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobacterium palustre / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobacterium palustre / qualifier | |||||||
16S Identity %: 71.84325108853412
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Haloprofundus halophilus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Haloprofundus halophilus / qualifier | |||||||
16S Identity %: 71.72557172557173
| |||||||
| Property / Comparison to close relatives: Haloprofundus halophilus / qualifier | |||||||
POCPu: 0.5248195932648152
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| Property / Comparison to close relatives: Haloprofundus halophilus / qualifier | |||||||
G+C Difference (%): 35.30000000000001
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobacterium kanagiense / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobacterium kanagiense / qualifier | |||||||
16S Identity %: 71.67710508002784
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Halorubrum cibi / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Halorubrum cibi / qualifier | |||||||
16S Identity %: 71.61693268563496
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| Property / Comparison to close relatives: Halorubrum cibi / qualifier | |||||||
POCPu: 0.5968011458582
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| Property / Comparison to close relatives: Halorubrum cibi / qualifier | |||||||
G+C Difference (%): 36.83
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Halorubrum lacusprofundi / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Halorubrum lacusprofundi / qualifier | |||||||
16S Identity %: 71.59722222222223
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| Property / Comparison to close relatives: Halorubrum lacusprofundi / qualifier | |||||||
POCPu: 0.5285412262156448
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| Property / Comparison to close relatives: Halorubrum lacusprofundi / qualifier | |||||||
G+C Difference (%): 33.980000000000004
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Salella cibi / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Salella cibi / qualifier | |||||||
16S Identity %: 71.57748436414177
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanothrix soehngenii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanothrix soehngenii / qualifier | |||||||
16S Identity %: 71.57676348547717
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| Property / Comparison to close relatives: Methanothrix soehngenii / qualifier | |||||||
POCPu: 1.0157194679564692
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| Property / Comparison to close relatives: Methanothrix soehngenii / qualifier | |||||||
G+C Difference (%): 21.000000000000004
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanotorris igneus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanotorris igneus / qualifier | |||||||
16S Identity %: 71.47790055248619
| |||||||
| Property / Comparison to close relatives: Methanotorris igneus / qualifier | |||||||
POCPu: 1.8563080096253008
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| Property / Comparison to close relatives: Methanotorris igneus / qualifier | |||||||
G+C Difference (%): 2.3099999999999987
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobacterium ivanovii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobacterium ivanovii / qualifier | |||||||
16S Identity %: 71.43884892086331
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobrevibacter ruminantium / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobrevibacter ruminantium / qualifier | |||||||
16S Identity %: 71.43869596031183
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| Property / Comparison to close relatives: Methanobrevibacter ruminantium / qualifier | |||||||
POCPu: 1.0346926354230066
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| Property / Comparison to close relatives: Methanobrevibacter ruminantium / qualifier | |||||||
G+C Difference (%): 2.650000000000002
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Haloprofundus salinisoli / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Haloprofundus salinisoli / qualifier | |||||||
16S Identity %: 71.26038781163435
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| Property / Comparison to close relatives: Haloprofundus salinisoli / qualifier | |||||||
POCPu: 0.5937981086430614
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| Property / Comparison to close relatives: Haloprofundus salinisoli / qualifier | |||||||
G+C Difference (%): 34.540000000000006
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Palaeococcus ferrophilus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Palaeococcus ferrophilus / qualifier | |||||||
16S Identity %: 71.22198120028924
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| Property / Comparison to close relatives: Palaeococcus ferrophilus / qualifier | |||||||
POCPu: 1.7231308411214952
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| Property / Comparison to close relatives: Palaeococcus ferrophilus / qualifier | |||||||
G+C Difference (%): 24.320000000000004
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Halorubrum kocurii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Halorubrum kocurii / qualifier | |||||||
16S Identity %: 71.13115891741846
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| Property / Comparison to close relatives: Halorubrum kocurii / qualifier | |||||||
POCPu: 0.5415944540727903
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| Property / Comparison to close relatives: Halorubrum kocurii / qualifier | |||||||
G+C Difference (%): 36.870000000000005
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanosalsum natronophilum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanosalsum natronophilum / qualifier | |||||||
16S Identity %: 71.05633802816902
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| Property / Comparison to close relatives: Methanosalsum natronophilum / qualifier | |||||||
POCPu: 1.1776251226692835
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| Property / Comparison to close relatives: Methanosalsum natronophilum / qualifier | |||||||
G+C Difference (%): 4.350000000000005
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Haloprofundus salilacu / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Haloprofundus salilacu / qualifier | |||||||
16S Identity %: 71.05263157894737
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Halorubrum vacuolatum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Halorubrum vacuolatum / qualifier | |||||||
16S Identity %: 71.0124826629681
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| Property / Comparison to close relatives: Halorubrum vacuolatum / qualifier | |||||||
POCPu: 0.5623031938821412
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| Property / Comparison to close relatives: Halorubrum vacuolatum / qualifier | |||||||
G+C Difference (%): 32.900000000000006
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Halorubrum aidingense / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Halorubrum aidingense / qualifier | |||||||
16S Identity %: 70.80443828016644
| |||||||
| Property / Comparison to close relatives: Halorubrum aidingense / qualifier | |||||||
POCPu: 0.5560928433268859
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| Property / Comparison to close relatives: Halorubrum aidingense / qualifier | |||||||
G+C Difference (%): 37.2
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermoplasma acidophilum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermoplasma acidophilum / qualifier | |||||||
16S Identity %: 70.76710435383552
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| Property / Comparison to close relatives: Thermoplasma acidophilum / qualifier | |||||||
POCPu: 0.8656379375235227
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| Property / Comparison to close relatives: Thermoplasma acidophilum / qualifier | |||||||
G+C Difference (%): 16.000000000000004
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobrevibacter filiformis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobrevibacter filiformis / qualifier | |||||||
16S Identity %: 70.28443113772454
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| Property / Comparison to close relatives: Methanobrevibacter filiformis / qualifier | |||||||
POCPu: 1.090909090909091
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| Property / Comparison to close relatives: Methanobrevibacter filiformis / qualifier | |||||||
G+C Difference (%): 3
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanococcus voltae / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanococcus voltae / qualifier | |||||||
16S Identity %: 70.22160664819944
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| Property / Comparison to close relatives: Methanococcus voltae / qualifier | |||||||
POCPu: 1.5937731653076352
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| Property / Comparison to close relatives: Methanococcus voltae / qualifier | |||||||
G+C Difference (%): 1
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| Property / Carbon source | |||||||
| Property / Carbon source: starch / rank | |||||||
Normal rank | |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH28 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH28 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GH57 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH57 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH13 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH13 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH0 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH0 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GH109 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH109 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GH23 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH23 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT13 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT13 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT66 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT66 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT35 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT35 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT3 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT3 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT2 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT2 / qualifier | |||||||
Occurance: 5
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT4 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT4 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: CBM50 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM50 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: CBM20 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM20 / qualifier | |||||||
Occurance: 1
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| Property / Pathway | |||||||
| Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc / rank | |||||||
Normal rank | |||||||
| Property / Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Lactate production / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Lactate production / qualifier | |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: insect gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: mouse gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human vaginal metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: freshwater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: coral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: coral metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: coral metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: pig gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: chicken gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: marine metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: marine metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: plant metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: plant metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: plant metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: soil metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: soil metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: soil metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human oral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: activated sludge metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: wastewater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: rhizosphere metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: marine sediment metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human lung metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: bovine gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human skin metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / MAGs | |||||||
| Property / MAGs: no MAG matches found / rank | |||||||
Normal rank | |||||||
Latest revision as of 12:51, 15 August 2026
genome assembly
| Language | Label | Description | Also known as |
|---|---|---|---|
| default for all languages | No label defined |
||
| English | GCA_041631255.1 |
genome assembly |
Statements
no current description - please contribute here
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