GCA_023381255.1 (Q130963): Difference between revisions
Appearance
Added qualifier: 16S Identity % (P3): 24.815063887020848 |
Created claim: MAGs (P28): no MAG matches found (Q42716) |
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| (171 intermediate revisions by the same user not shown) | |||||||
| Property / Comparison to close relatives: Saccharolobus solfataricus / qualifier | |||||||
POCPu: 4.924242424242424
| |||||||
| Property / Comparison to close relatives: Saccharolobus solfataricus / qualifier | |||||||
G+C Difference (%): 8.61
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Saccharolobus shibatae / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Saccharolobus shibatae / qualifier | |||||||
16S Identity %: 24.815063887020848
| |||||||
| Property / Comparison to close relatives: Saccharolobus shibatae / qualifier | |||||||
POCPu: 5.2688874374047465
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| Property / Comparison to close relatives: Saccharolobus shibatae / qualifier | |||||||
G+C Difference (%): 9.090000000000003
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermogladius calderae / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermogladius calderae / qualifier | |||||||
16S Identity %: 24.78173270651444
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| Property / Comparison to close relatives: Thermogladius calderae / qualifier | |||||||
POCPu: 3.7206037206037204
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| Property / Comparison to close relatives: Thermogladius calderae / qualifier | |||||||
G+C Difference (%): 11.189999999999998
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanothermus fervidus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanothermus fervidus / qualifier | |||||||
16S Identity %: 24.78055367994598
| |||||||
| Property / Comparison to close relatives: Methanothermus fervidus / qualifier | |||||||
POCPu: 3.4959941733430444
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| Property / Comparison to close relatives: Methanothermus fervidus / qualifier | |||||||
G+C Difference (%): 12.810000000000002
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermofilum pendens / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermofilum pendens / qualifier | |||||||
16S Identity %: 24.715338245144007
| |||||||
| Property / Comparison to close relatives: Thermofilum pendens / qualifier | |||||||
POCPu: 2.768681155105686
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| Property / Comparison to close relatives: Thermofilum pendens / qualifier | |||||||
G+C Difference (%): 13.199999999999996
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Vulcanisaeta distributa / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Vulcanisaeta distributa / qualifier | |||||||
16S Identity %: 24.681421864520456
| |||||||
| Property / Comparison to close relatives: Vulcanisaeta distributa / qualifier | |||||||
POCPu: 5.67783891945973
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| Property / Comparison to close relatives: Vulcanisaeta distributa / qualifier | |||||||
G+C Difference (%): 0.9799999999999969
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Caldivirga maquilingensis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Caldivirga maquilingensis / qualifier | |||||||
16S Identity %: 24.505119453924916
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| Property / Comparison to close relatives: Caldivirga maquilingensis / qualifier | |||||||
POCPu: 5.6490727532097
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| Property / Comparison to close relatives: Caldivirga maquilingensis / qualifier | |||||||
G+C Difference (%): 1.3500000000000014
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Saccharolobus caldissimus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Saccharolobus caldissimus / qualifier | |||||||
16S Identity %: 24.475997295469913
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| Property / Comparison to close relatives: Saccharolobus caldissimus / qualifier | |||||||
POCPu: 5.185497470489039
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| Property / Comparison to close relatives: Saccharolobus caldissimus / qualifier | |||||||
G+C Difference (%): 11.550000000000004
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Conexivisphaera calida / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Conexivisphaera calida / qualifier | |||||||
16S Identity %: 23.879598662207357
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| Property / Comparison to close relatives: Conexivisphaera calida / qualifier | |||||||
POCPu: 16.79815910585141
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| Property / Comparison to close relatives: Conexivisphaera calida / qualifier | |||||||
G+C Difference (%): 17.619999999999997
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Pyrobaculum ferrireducens / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Pyrobaculum ferrireducens / qualifier | |||||||
16S Identity %: 23.59249329758713
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| Property / Comparison to close relatives: Pyrobaculum ferrireducens / qualifier | |||||||
POCPu: 3.4735349716446122
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| Property / Comparison to close relatives: Pyrobaculum ferrireducens / qualifier | |||||||
G+C Difference (%): 12.519999999999996
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Staphylothermus hellenicus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Staphylothermus hellenicus / qualifier | |||||||
16S Identity %: 23.205902079141516
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| Property / Comparison to close relatives: Staphylothermus hellenicus / qualifier | |||||||
POCPu: 3.155497722836695
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| Property / Comparison to close relatives: Staphylothermus hellenicus / qualifier | |||||||
G+C Difference (%): 7.609999999999999
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermosphaera aggregans / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermosphaera aggregans / qualifier | |||||||
16S Identity %: 22.75167785234899
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| Property / Comparison to close relatives: Thermosphaera aggregans / qualifier | |||||||
POCPu: 3.27119240239184
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| Property / Comparison to close relatives: Thermosphaera aggregans / qualifier | |||||||
G+C Difference (%): 2.279999999999994
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Ignicoccus islandicus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Ignicoccus islandicus / qualifier | |||||||
16S Identity %: 22.624743677375257
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| Property / Comparison to close relatives: Ignicoccus islandicus / qualifier | |||||||
POCPu: 3.3647375504710633
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| Property / Comparison to close relatives: Ignicoccus islandicus / qualifier | |||||||
G+C Difference (%): 0.44999999999999574
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Sulfophobococcus zilligii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Sulfophobococcus zilligii / qualifier | |||||||
16S Identity %: 22.351332877648666
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| Property / CAZyme | |||||||
| Property / CAZyme: GH15 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH15 / qualifier | |||||||
Occurance: 2
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| Property / CAZyme | |||||||
| Property / CAZyme: GH133 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH133 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GH13 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH13 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GH57 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH57 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GH19 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH19 / qualifier | |||||||
Occurance: 3
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| Property / CAZyme | |||||||
| Property / CAZyme: GH0 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH0 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT7 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT7 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT13 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT13 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT1 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT1 / qualifier | |||||||
Occurance: 3
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| Property / CAZyme | |||||||
| Property / CAZyme: GT2 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT2 / qualifier | |||||||
Occurance: 5
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| Property / CAZyme | |||||||
| Property / CAZyme: GT4 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT4 / qualifier | |||||||
Occurance: 5
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| Property / CAZyme | |||||||
| Property / CAZyme: GT21 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT21 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT51 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT51 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: CE14 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CE14 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: CBM50 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM50 / qualifier | |||||||
Occurance: 3
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| Property / CAZyme | |||||||
| Property / CAZyme: CBM5 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM5 / qualifier | |||||||
Occurance: 3
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| Property / Pathway | |||||||
| Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / rank | |||||||
Normal rank | |||||||
| Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Ornithine biosynthesis, glutamate => ornithine / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Ornithine biosynthesis, glutamate => ornithine / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Pentose phosphate pathway, archaea, fructose 6P => ribose 5P / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Pentose phosphate pathway, archaea, fructose 6P => ribose 5P / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Arginine biosynthesis, ornithine => arginine / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Arginine biosynthesis, ornithine => arginine / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Sulfur reduction, sulfur => sulfide / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Sulfur reduction, sulfur => sulfide / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Alanine degradation II / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Alanine degradation II / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Glutamine degradation II / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Glutamine degradation II / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Pyruvate:ferredoxin oxidoreductase / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Pyruvate:ferredoxin oxidoreductase / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Acetyl-CoA to crotonyl-CoA / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Acetyl-CoA to crotonyl-CoA / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Sulfate reduction (dissimilatory) / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Sulfate reduction (dissimilatory) / qualifier | |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: insect gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: mouse gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human vaginal metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: freshwater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: coral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: coral metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: coral metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: pig gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: chicken gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: marine metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: marine metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: plant metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: plant metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: plant metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: soil metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: soil metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: soil metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human oral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: activated sludge metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: wastewater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: rhizosphere metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: marine sediment metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human lung metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: bovine gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human skin metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / MAGs | |||||||
| Property / MAGs: no MAG matches found / rank | |||||||
Normal rank | |||||||
Latest revision as of 04:56, 15 August 2026
genome assembly
| Language | Label | Description | Also known as |
|---|---|---|---|
| default for all languages | No label defined |
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| English | GCA_023381255.1 |
genome assembly |
Statements
no current description - please contribute here
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