GCA_030616125.1 (Q110358): Difference between revisions
Appearance
Added qualifier: POCPu (P4): 1.4288630332720964 |
Created claim: MAGs (P28): no MAG matches found (Q42716) |
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| Property / Comparison to close relatives: Methanogenium cariaci / qualifier | |||||||
G+C Difference (%): 19.090000000000003
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanoculleus horonobensis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanoculleus horonobensis / qualifier | |||||||
16S Identity %: 71.5909090909091
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| Property / Comparison to close relatives: Methanoculleus horonobensis / qualifier | |||||||
POCPu: 1.8357487922705313
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| Property / Comparison to close relatives: Methanoculleus horonobensis / qualifier | |||||||
G+C Difference (%): 29.07
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanoculleus chikugoensis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanoculleus chikugoensis / qualifier | |||||||
16S Identity %: 71.51079136690647
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| Property / Comparison to close relatives: Methanoculleus chikugoensis / qualifier | |||||||
POCPu: 1.6886705557261283
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| Property / Comparison to close relatives: Methanoculleus chikugoensis / qualifier | |||||||
G+C Difference (%): 28.89
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanoculleus submarinus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanoculleus submarinus / qualifier | |||||||
16S Identity %: 71.5007215007215
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanoculleus palmolei / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanoculleus palmolei / qualifier | |||||||
16S Identity %: 71.50035893754487
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanomethylophilus alvi / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanomethylophilus alvi / qualifier | |||||||
16S Identity %: 71.11286503551698
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| Property / Comparison to close relatives: Methanomethylophilus alvi / qualifier | |||||||
POCPu: 1.9514310494362535
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| Property / Comparison to close relatives: Methanomethylophilus alvi / qualifier | |||||||
G+C Difference (%): 22.620000000000005
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanolacinia paynteri / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanolacinia paynteri / qualifier | |||||||
16S Identity %: 71.08626198083067
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| Property / Comparison to close relatives: Methanolacinia paynteri / qualifier | |||||||
POCPu: 1.6954106986261326
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| Property / Comparison to close relatives: Methanolacinia paynteri / qualifier | |||||||
G+C Difference (%): 14.46
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Halorubrum salinarum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Halorubrum salinarum / qualifier | |||||||
16S Identity %: 70.60906515580736
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| Property / Comparison to close relatives: Halorubrum salinarum / qualifier | |||||||
POCPu: 0.6317917614354309
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| Property / Comparison to close relatives: Halorubrum salinarum / qualifier | |||||||
G+C Difference (%): 35.72
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Picrophilus oshimae / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Picrophilus oshimae / qualifier | |||||||
16S Identity %: 70.27027027027027
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| Property / Comparison to close relatives: Picrophilus oshimae / qualifier | |||||||
POCPu: 1.4184397163120568
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| Property / Comparison to close relatives: Picrophilus oshimae / qualifier | |||||||
G+C Difference (%): 3.009999999999998
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Picrophilus torridus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Picrophilus torridus / qualifier | |||||||
16S Identity %: 70.13167013167013
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Ferroplasma acidiphilum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Ferroplasma acidiphilum / qualifier | |||||||
16S Identity %: 69.6105702364395
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| Property / Comparison to close relatives: Ferroplasma acidiphilum / qualifier | |||||||
POCPu: 1.2404961984793916
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| Property / Comparison to close relatives: Ferroplasma acidiphilum / qualifier | |||||||
G+C Difference (%): 3.520000000000003
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Microcaldus variisymbioticus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Microcaldus variisymbioticus / qualifier | |||||||
16S Identity %: 68.98989898989899
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanococcus voltae / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanococcus voltae / qualifier | |||||||
16S Identity %: 68.16298342541437
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| Property / Comparison to close relatives: Methanococcus voltae / qualifier | |||||||
POCPu: 2.8496273564226215
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| Property / Comparison to close relatives: Methanococcus voltae / qualifier | |||||||
G+C Difference (%): 3.9800000000000004
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| Property / CAZyme | |||||||
| Property / CAZyme: GH63 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH63 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT13 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT13 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT22 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT22 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT2 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT2 / qualifier | |||||||
Occurance: 5
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| Property / CAZyme | |||||||
| Property / CAZyme: GT4 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT4 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: CBM50 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM50 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: CBM2 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM2 / qualifier | |||||||
Occurance: 1
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| Property / Pathway | |||||||
| Property / Pathway: Acetate to acetyl-CoA / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Acetate to acetyl-CoA / qualifier | |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: insect gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: mouse gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human vaginal metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: freshwater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: coral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: coral metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: coral metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: pig gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: chicken gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: marine metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: marine metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: plant metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: plant metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: plant metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: soil metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: soil metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: soil metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human oral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: activated sludge metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: wastewater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: rhizosphere metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: marine sediment metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Prevalence (%): 0.6
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| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Relative abundance (%): 0.01
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human lung metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: bovine gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human skin metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / MAGs | |||||||
| Property / MAGs: no MAG matches found / rank | |||||||
Normal rank | |||||||
Latest revision as of 15:52, 13 August 2026
genome assembly
| Language | Label | Description | Also known as |
|---|---|---|---|
| default for all languages | No label defined |
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| English | GCA_030616125.1 |
genome assembly |
Statements
no current description - please contribute here
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