GCA_021827525.1 (Q108527): Difference between revisions
Appearance
Added qualifier: 16S Identity % (P3): 23.335883703136957 |
Created claim: MAGs (P28): no MAG matches found (Q42716) |
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| (163 intermediate revisions by the same user not shown) | |||||||
| Property / Comparison to close relatives: Halosimplex pelagicum / qualifier | |||||||
POCPu: 0.2626510243389949
| |||||||
| Property / Comparison to close relatives: Halosimplex pelagicum / qualifier | |||||||
G+C Difference (%): 18.08
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Natrialba magadii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Natrialba magadii / qualifier | |||||||
16S Identity %: 23.165137614678898
| |||||||
| Property / Comparison to close relatives: Natrialba magadii / qualifier | |||||||
POCPu: 0.28594771241830064
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| Property / Comparison to close relatives: Natrialba magadii / qualifier | |||||||
G+C Difference (%): 12.079999999999998
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Halobacterium litoreum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Halobacterium litoreum / qualifier | |||||||
16S Identity %: 23.137876386687797
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| Property / Comparison to close relatives: Halobacterium litoreum / qualifier | |||||||
POCPu: 0.4864091559370529
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| Property / Comparison to close relatives: Halobacterium litoreum / qualifier | |||||||
G+C Difference (%): 19.629999999999995
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Halobacterium jilantaiense / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Halobacterium jilantaiense / qualifier | |||||||
16S Identity %: 22.994652406417114
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| Property / Comparison to close relatives: Halobacterium jilantaiense / qualifier | |||||||
POCPu: 0.35451322607035723
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| Property / Comparison to close relatives: Halobacterium jilantaiense / qualifier | |||||||
G+C Difference (%): 18.960000000000008
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Natrinema zhouii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Natrinema zhouii / qualifier | |||||||
16S Identity %: 22.918258212375857
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| Property / Comparison to close relatives: Natrinema zhouii / qualifier | |||||||
POCPu: 0.332944897619444
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| Property / Comparison to close relatives: Natrinema zhouii / qualifier | |||||||
G+C Difference (%): 12.54
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Natrialba asiatica / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Natrialba asiatica / qualifier | |||||||
16S Identity %: 22.841864018334608
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| Property / Comparison to close relatives: Natrialba asiatica / qualifier | |||||||
POCPu: 0.26683087027914615
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| Property / Comparison to close relatives: Natrialba asiatica / qualifier | |||||||
G+C Difference (%): 13.420000000000002
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Natrialba aegyptia / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Natrialba aegyptia / qualifier | |||||||
16S Identity %: 22.797527047913448
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| Property / Comparison to close relatives: Natrialba aegyptia / qualifier | |||||||
POCPu: 0.29205607476635514
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| Property / Comparison to close relatives: Natrialba aegyptia / qualifier | |||||||
G+C Difference (%): 13.009999999999998
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Natrinema altunense / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Natrinema altunense / qualifier | |||||||
16S Identity %: 22.765469824293355
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| Property / Comparison to close relatives: Natrinema altunense / qualifier | |||||||
POCPu: 0.38946162657502864
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| Property / Comparison to close relatives: Natrinema altunense / qualifier | |||||||
G+C Difference (%): 15.590000000000003
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Natrialba taiwanensis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Natrialba taiwanensis / qualifier | |||||||
16S Identity %: 22.689075630252102
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| Property / Comparison to close relatives: Natrialba taiwanensis / qualifier | |||||||
POCPu: 0.2912621359223301
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| Property / Comparison to close relatives: Natrialba taiwanensis / qualifier | |||||||
G+C Difference (%): 12.550000000000004
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Natrinema pallidum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Natrinema pallidum / qualifier | |||||||
16S Identity %: 22.61268143621085
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| Property / Comparison to close relatives: Natrinema pallidum / qualifier | |||||||
POCPu: 0.35555555555555557
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| Property / Comparison to close relatives: Natrinema pallidum / qualifier | |||||||
G+C Difference (%): 14.75
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Natrinema gari / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Natrinema gari / qualifier | |||||||
16S Identity %: 22.61268143621085
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| Property / Comparison to close relatives: Natrinema gari / qualifier | |||||||
POCPu: 0.363714163457424
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| Property / Comparison to close relatives: Natrinema gari / qualifier | |||||||
G+C Difference (%): 14.75
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Halobacterium wangiae / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Halobacterium wangiae / qualifier | |||||||
16S Identity %: 22.61268143621085
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| Property / Comparison to close relatives: Halobacterium wangiae / qualifier | |||||||
POCPu: 0.36354193715917943
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| Property / Comparison to close relatives: Halobacterium wangiae / qualifier | |||||||
G+C Difference (%): 18.310000000000002
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Natrarchaeobius halalkaliphilus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Natrarchaeobius halalkaliphilus / qualifier | |||||||
16S Identity %: 22.536287242169596
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| Property / Comparison to close relatives: Natrarchaeobius halalkaliphilus / qualifier | |||||||
POCPu: 0.42120911793855303
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| Property / Comparison to close relatives: Natrarchaeobius halalkaliphilus / qualifier | |||||||
G+C Difference (%): 12.160000000000004
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Natrinema salsiterrestre / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Natrinema salsiterrestre / qualifier | |||||||
16S Identity %: 22.50384024577573
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| Property / Comparison to close relatives: Natrinema salsiterrestre / qualifier | |||||||
POCPu: 0.3205128205128205
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| Property / Comparison to close relatives: Natrinema salsiterrestre / qualifier | |||||||
G+C Difference (%): 14.79
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Natrinema amylolyticum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Natrinema amylolyticum / qualifier | |||||||
16S Identity %: 22.477064220183486
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| Property / Comparison to close relatives: Natrinema amylolyticum / qualifier | |||||||
POCPu: 0.35046728971962615
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| Property / Comparison to close relatives: Natrinema amylolyticum / qualifier | |||||||
G+C Difference (%): 15.340000000000003
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Natrialba swarupiae / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Natrialba swarupiae / qualifier | |||||||
16S Identity %: 22.366412213740457
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| Property / Comparison to close relatives: Natrialba swarupiae / qualifier | |||||||
POCPu: 0.3241841365895829
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| Property / Comparison to close relatives: Natrialba swarupiae / qualifier | |||||||
G+C Difference (%): 13.550000000000004
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Halostagnicola larsenii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Halostagnicola larsenii / qualifier | |||||||
16S Identity %: 22.32415902140673
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| Property / Comparison to close relatives: Halostagnicola larsenii / qualifier | |||||||
POCPu: 0.36410366245448705
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| Property / Comparison to close relatives: Halostagnicola larsenii / qualifier | |||||||
G+C Difference (%): 11.93
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanothrix thermoacetophila / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanothrix thermoacetophila / qualifier | |||||||
16S Identity %: 22.307104660045837
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| Property / Comparison to close relatives: Methanothrix thermoacetophila / qualifier | |||||||
POCPu: 1.1306532663316584
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| Property / Comparison to close relatives: Methanothrix thermoacetophila / qualifier | |||||||
G+C Difference (%): 4.579999999999998
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Halostagnicola alkaliphila / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Halostagnicola alkaliphila / qualifier | |||||||
16S Identity %: 22.24770642201835
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Natrialba hulunbeirensis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Natrialba hulunbeirensis / qualifier | |||||||
16S Identity %: 22.171253822629968
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| Property / Comparison to close relatives: Natrialba hulunbeirensis / qualifier | |||||||
POCPu: 0.2639102705080273
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| Property / Comparison to close relatives: Natrialba hulunbeirensis / qualifier | |||||||
G+C Difference (%): 12.759999999999998
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Halanaeroarchaeum sulfurireducens / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Halanaeroarchaeum sulfurireducens / qualifier | |||||||
16S Identity %: 22.12051868802441
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| Property / Comparison to close relatives: Halanaeroarchaeum sulfurireducens / qualifier | |||||||
POCPu: 0.6697215368346845
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| Property / Comparison to close relatives: Halanaeroarchaeum sulfurireducens / qualifier | |||||||
G+C Difference (%): 13.880000000000003
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| Property / CAZyme | |||||||
| Property / CAZyme: GH15 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH15 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT66 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT66 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT13 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT13 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT22 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT22 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT2 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT2 / qualifier | |||||||
Occurance: 6
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| Property / CAZyme | |||||||
| Property / CAZyme: GT4 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT4 / qualifier | |||||||
Occurance: 2
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| Property / CAZyme | |||||||
| Property / CAZyme: GT21 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT21 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: CE4 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CE4 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: CBM50 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM50 / qualifier | |||||||
Occurance: 2
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| Property / Pathway | |||||||
| Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Arginine degradation V / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Arginine degradation V / qualifier | |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: insect gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: mouse gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human vaginal metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: freshwater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: coral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: coral metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: coral metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: pig gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: chicken gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: marine metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: marine metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: plant metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: plant metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: plant metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: soil metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: soil metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: soil metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human oral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: activated sludge metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: wastewater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: rhizosphere metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: marine sediment metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human lung metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: bovine gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human skin metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / MAGs | |||||||
| Property / MAGs: no MAG matches found / rank | |||||||
Normal rank | |||||||
Latest revision as of 11:34, 13 August 2026
genome assembly
| Language | Label | Description | Also known as |
|---|---|---|---|
| default for all languages | No label defined |
||
| English | GCA_021827525.1 |
genome assembly |
Statements
no current description - please contribute here
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