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‎Added qualifier: Ecosystem (P27): Generic (Q43559)
 
(35 intermediate revisions by the same user not shown)
Property / Ecosystem: human oral metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human oral metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: activated sludge metagenome / rank
 
Normal rank
Property / Ecosystem: activated sludge metagenome / qualifier
 
Prevalence (%): 2.3
Amount2.3
Unit1
Property / Ecosystem: activated sludge metagenome / qualifier
 
Relative abundance (%): 0.15
Amount0.15
Unit1
Property / Ecosystem
 
Property / Ecosystem: wastewater metagenome / rank
 
Normal rank
Property / Ecosystem: wastewater metagenome / qualifier
 
Prevalence (%): 1.3
Amount1.3
Unit1
Property / Ecosystem: wastewater metagenome / qualifier
 
Relative abundance (%): 0.7
Amount0.7
Unit1
Property / Ecosystem
 
Property / Ecosystem: rhizosphere metagenome / rank
 
Normal rank
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Prevalence (%): 2.5
Amount2.5
Unit1
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine sediment metagenome / rank
 
Normal rank
Property / Ecosystem: marine sediment metagenome / qualifier
 
Prevalence (%): 0.3
Amount0.3
Unit1
Property / Ecosystem: marine sediment metagenome / qualifier
 
Relative abundance (%): 0.02
Amount0.02
Unit1
Property / Ecosystem
 
Property / Ecosystem: human lung metagenome / rank
 
Normal rank
Property / Ecosystem: human lung metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human lung metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: bovine gut metagenome / rank
 
Normal rank
Property / Ecosystem: bovine gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: bovine gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human skin metagenome / rank
 
Normal rank
Property / Ecosystem: human skin metagenome / qualifier
 
Prevalence (%): 0.1
Amount0.1
Unit1
Property / Ecosystem: human skin metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: human gut metagenome / rank
 
Normal rank
Property / Ecosystem: human gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / MAGs
 
Property / MAGs: GCA_002494705.1_ASM249470v1_genomic.fna / rank
 
Normal rank
Property / MAGs: GCA_002494705.1_ASM249470v1_genomic.fna / qualifier
 
Property / MAGs
 
Property / MAGs: GCA_012838075.1_ASM1283807v1_genomic.fna / rank
 
Normal rank
Property / MAGs: GCA_012838075.1_ASM1283807v1_genomic.fna / qualifier
 
Property / MAGs
 
Property / MAGs: 3300025657_39.fna / rank
 
Normal rank
Property / MAGs: 3300025657_39.fna / qualifier
 
Property / MAGs
 
Property / MAGs: 3300025683_42.fna / rank
 
Normal rank
Property / MAGs: 3300025683_42.fna / qualifier
 
Property / MAGs
 
Property / MAGs: 3300027510_55.fna / rank
 
Normal rank
Property / MAGs: 3300027510_55.fna / qualifier
 

Latest revision as of 14:07, 22 July 2026

genome assembly
Language Label Description Also known as
default for all languages
No label defined
    English
    GCA_001512965.1
    genome assembly

      Statements

      Protologue of the species
      no current description - please contribute here
      0 references
      Comparison to close relatives
      Methanomassiliicoccus luminyensis
      16S Identity %
      96.43605870020964
      POCPu
      56.695926176007205
      ANI %
      77.4357
      G+C Difference (%)
      1.6899999999999977
      0 references
      Methanomethylophilus alvi
      16S Identity %
      86.04100946372239
      POCPu
      23.721998851234922
      G+C Difference (%)
      3.1999999999999957
      0 references
      Thermoplasma volcanium
      16S Identity %
      80.09543285616905
      POCPu
      6.601607347876004
      G+C Difference (%)
      18.869999999999997
      0 references
      Thermoplasma acidophilum
      16S Identity %
      80.01364256480218
      POCPu
      6.996487119437939
      G+C Difference (%)
      12.799999999999997
      0 references
      Thermogymnomonas acidicola
      16S Identity %
      79.91234477720964
      POCPu
      7.384797164237888
      G+C Difference (%)
      2.3599999999999994
      0 references
      Cuniculiplasma divulgatum
      16S Identity %
      79.87721691678036
      POCPu
      5.307409353652128
      G+C Difference (%)
      21.490000000000002
      0 references
      Methanococcoides burtonii
      16S Identity %
      79.1268758526603
      POCPu
      8.607935440484196
      G+C Difference (%)
      18.03
      0 references
      Methanolobus mangrovi
      16S Identity %
      78.86843899113838
      POCPu
      9.418791637950838
      G+C Difference (%)
      17.18
      0 references
      Methanolobus zinderi
      16S Identity %
      78.63481228668941
      POCPu
      8.901220865704772
      G+C Difference (%)
      14.729999999999997
      0 references
      Methanococcoides alaskense
      16S Identity %
      78.60294117647058
      POCPu
      9.009222038306929
      G+C Difference (%)
      17.1
      0 references
      Methanococcoides orientis
      16S Identity %
      78.59577368779823
      POCPu
      9.322235434007133
      G+C Difference (%)
      16.11
      0 references
      Picrophilus torridus
      16S Identity %
      78.55670103092784
      0 references
      Methanococcoides methylutens
      16S Identity %
      78.54694996572995
      POCPu
      9.337979094076655
      G+C Difference (%)
      16.29
      0 references
      Picrophilus oshimae
      16S Identity %
      78.49829351535837
      POCPu
      6.002331002331003
      G+C Difference (%)
      22.810000000000002
      0 references
      Methanolobus sediminis
      16S Identity %
      78.32310838445807
      POCPu
      9.481808158765158
      G+C Difference (%)
      17.85
      0 references
      Methanomethylovorans hollandica
      16S Identity %
      78.27897293546148
      POCPu
      9.16796787865269
      G+C Difference (%)
      16.92
      0 references
      Methanolobus profundi
      16S Identity %
      78.23908375089478
      POCPu
      8.788898233809924
      G+C Difference (%)
      16.22
      0 references
      Methanomethylovorans thermophila
      16S Identity %
      78.12960235640648
      0 references
      Methanocella arvoryzae
      16S Identity %
      78.08873720136519
      POCPu
      9.14769292766472
      G+C Difference (%)
      4.189999999999998
      0 references
      Methanolobus bombayensis
      16S Identity %
      77.85372522214628
      POCPu
      8.978985353428147
      G+C Difference (%)
      19.07
      0 references
      Thermococcus thermotolerans
      16S Identity %
      77.85372522214628
      POCPu
      6.448484848484847
      G+C Difference (%)
      5.299999999999997
      0 references
      Methanolobus psychrotolerans
      16S Identity %
      77.82546494992847
      POCPu
      8.250414593698176
      G+C Difference (%)
      17.46
      0 references
      Methanolobus halotolerans
      16S Identity %
      77.82546494992847
      POCPu
      9.084714967067908
      G+C Difference (%)
      15.21
      0 references
      Thermococcus piezophilus
      16S Identity %
      77.77777777777779
      POCPu
      6.439854191980558
      G+C Difference (%)
      7.68
      0 references
      Acidiplasma aeolicum
      16S Identity %
      77.76119402985074
      POCPu
      5.359584358764014
      G+C Difference (%)
      24.810000000000002
      0 references
      Methanohalobium evestigatum
      16S Identity %
      77.74725274725274
      POCPu
      8.047058823529412
      G+C Difference (%)
      22.369999999999997
      0 references
      Methanoculleus marisnigri
      16S Identity %
      77.70177838577291
      POCPu
      10.0531546105847
      G+C Difference (%)
      3.270000000000003
      0 references
      Methanothrix thermoacetophila
      16S Identity %
      77.6944065484311
      POCPu
      11.159737417943107
      G+C Difference (%)
      5.240000000000002
      0 references
      Methanosalsum natronophilum
      16S Identity %
      77.62334954829743
      POCPu
      8.857442348008385
      G+C Difference (%)
      24.449999999999996
      0 references
      Methanolobus oregonensis
      16S Identity %
      77.5654635527247
      0 references
      Methanoculleus sediminis
      16S Identity %
      77.56272401433691
      POCPu
      10.20171574310225
      G+C Difference (%)
      3.509999999999998
      0 references
      Methanolinea tarda
      16S Identity %
      77.55244755244756
      POCPu
      7.885906040268456
      G+C Difference (%)
      3.960000000000001
      0 references
      Methanosarcina semesiae
      16S Identity %
      77.51561415683554
      0 references
      Methanothrix soehngenii
      16S Identity %
      77.48976807639836
      POCPu
      7.437678790355537
      G+C Difference (%)
      7.799999999999997
      0 references
      Methanocella paludicola
      16S Identity %
      77.4825174825175
      POCPu
      9.532557664829557
      G+C Difference (%)
      3.8699999999999974
      0 references
      Methanomethylovorans uponensis
      16S Identity %
      77.4800868935554
      0 references
      Acidiplasma cupricumulans
      16S Identity %
      77.44621790423317
      0 references
      Methanohalophilus mahii
      16S Identity %
      77.43694614860259
      POCPu
      9.722582317863624
      G+C Difference (%)
      16.17
      0 references
      Methanoculleus thermophilus
      16S Identity %
      77.4171270718232
      POCPu
      10.829268292682928
      G+C Difference (%)
      0.5300000000000011
      0 references
      Methanoculleus palmolei
      16S Identity %
      77.38095238095238
      0 references
      Thermococcus zilligii
      16S Identity %
      77.31958762886599
      POCPu
      7.140932363244408
      G+C Difference (%)
      4.310000000000002
      0 references
      Methanoculleus chikugoensis
      16S Identity %
      77.29502452697969
      POCPu
      10.376720054139408
      G+C Difference (%)
      3.0700000000000003
      0 references
      Methanoculleus hydrogenitrophicus
      16S Identity %
      77.28860936408107
      0 references
      Methanoregula boonei
      16S Identity %
      77.26957726957727
      POCPu
      8.710562414266118
      G+C Difference (%)
      4.280000000000001
      0 references
      Methanotorris igneus
      16S Identity %
      77.23244717109748
      POCPu
      8.151581243184298
      G+C Difference (%)
      26.490000000000002
      0 references
      Methanotorris formicicus
      16S Identity %
      77.02794819359237
      POCPu
      7.409353652128218
      G+C Difference (%)
      26.35
      0 references
      Methanothermobacter thermautotrophicus
      16S Identity %
      77.02794819359237
      POCPu
      9.322944653412144
      G+C Difference (%)
      9.25
      0 references
      Methanosphaerula palustris
      16S Identity %
      76.83344756682659
      POCPu
      8.021621621621621
      G+C Difference (%)
      3.4399999999999977
      0 references
      Methanolobus vulcani
      16S Identity %
      76.64543524416136
      POCPu
      8.736180359852591
      G+C Difference (%)
      18.589999999999996
      0 references
      Methanothermococcus thermolithotrophicus
      16S Identity %
      76.28865979381443
      POCPu
      7.134767836919592
      G+C Difference (%)
      25.9
      0 references
      CAZyme
      GH65
      Occurance
      1
      0 references
      GH15
      Occurance
      1
      0 references
      GH5
      Occurance
      1
      0 references
      GH16
      Occurance
      1
      0 references
      GH0
      Occurance
      3
      0 references
      GH109
      Occurance
      1
      0 references
      GH19
      Occurance
      3
      0 references
      GH43
      Occurance
      1
      0 references
      GT66
      Occurance
      1
      0 references
      GT7
      Occurance
      1
      0 references
      GT1
      Occurance
      4
      0 references
      GT20
      Occurance
      1
      0 references
      GT2
      Occurance
      19
      0 references
      GT4
      Occurance
      15
      0 references
      GT0
      Occurance
      2
      0 references
      GT14
      Occurance
      1
      0 references
      CE9
      Occurance
      1
      0 references
      CE14
      Occurance
      1
      0 references
      CBM50
      Occurance
      6
      0 references
      CBM13
      Occurance
      1
      0 references
      CBM6
      Occurance
      2
      0 references
      CBM2
      Occurance
      1
      0 references
      CBM5
      Occurance
      3
      0 references
      Pathway
      Ecosystem
       
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