GCA_016432305.1 (Q104964): Difference between revisions
Appearance
Added qualifier: POCPu (P4): 3.4558021098581304 |
Created claim: MAGs (P28): no MAG matches found (Q42716) |
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| Property / Comparison to close relatives: Methanothermobacter thermautotrophicus / qualifier | |||||||
G+C Difference (%): 18.119999999999997
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanosphaera cuniculi / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanosphaera cuniculi / qualifier | |||||||
16S Identity %: 23.171565276828435
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| Property / Comparison to close relatives: Methanosphaera cuniculi / qualifier | |||||||
POCPu: 2.644426362896664
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| Property / Comparison to close relatives: Methanosphaera cuniculi / qualifier | |||||||
G+C Difference (%): 3.3400000000000034
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanothermus sociabilis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanothermus sociabilis / qualifier | |||||||
16S Identity %: 23.06108442004118
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanocaldococcus infernus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanocaldococcus infernus / qualifier | |||||||
16S Identity %: 23.029472241261136
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| Property / Comparison to close relatives: Methanocaldococcus infernus / qualifier | |||||||
POCPu: 4.2181508308478906
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| Property / Comparison to close relatives: Methanocaldococcus infernus / qualifier | |||||||
G+C Difference (%): 2.1999999999999957
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobrevibacter curvatus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobrevibacter curvatus / qualifier | |||||||
16S Identity %: 22.968980797636632
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| Property / Comparison to close relatives: Methanobrevibacter curvatus / qualifier | |||||||
POCPu: 2.390158172231986
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| Property / Comparison to close relatives: Methanobrevibacter curvatus / qualifier | |||||||
G+C Difference (%): 5.700000000000003
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobacterium lacus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobacterium lacus / qualifier | |||||||
16S Identity %: 22.961854899027674
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| Property / Comparison to close relatives: Methanobacterium lacus / qualifier | |||||||
POCPu: 2.268041237113402
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| Property / Comparison to close relatives: Methanobacterium lacus / qualifier | |||||||
G+C Difference (%): 4.409999999999997
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanococcus aeolicus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanococcus aeolicus / qualifier | |||||||
16S Identity %: 22.861054072553046
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| Property / Comparison to close relatives: Methanococcus aeolicus / qualifier | |||||||
POCPu: 2.835696413678065
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| Property / Comparison to close relatives: Methanococcus aeolicus / qualifier | |||||||
G+C Difference (%): 1.3800000000000026
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanonatronarchaeum thermophilum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanonatronarchaeum thermophilum / qualifier | |||||||
16S Identity %: 22.829801777170196
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| Property / Comparison to close relatives: Methanonatronarchaeum thermophilum / qualifier | |||||||
POCPu: 2.7208036835496023
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| Property / Comparison to close relatives: Methanonatronarchaeum thermophilum / qualifier | |||||||
G+C Difference (%): 6.479999999999997
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobacterium alcaliphilum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobacterium alcaliphilum / qualifier | |||||||
16S Identity %: 22.467902995720397
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| Property / Comparison to close relatives: Methanobacterium alcaliphilum / qualifier | |||||||
POCPu: 2.204030226700252
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| Property / Comparison to close relatives: Methanobacterium alcaliphilum / qualifier | |||||||
G+C Difference (%): 1.9799999999999969
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanocaldococcus bathoardescens / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanocaldococcus bathoardescens / qualifier | |||||||
16S Identity %: 22.351332877648666
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| Property / Comparison to close relatives: Methanocaldococcus bathoardescens / qualifier | |||||||
POCPu: 3.9231071008238527
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| Property / Comparison to close relatives: Methanocaldococcus bathoardescens / qualifier | |||||||
G+C Difference (%): 0.6300000000000026
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanocaldococcus jannaschii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanocaldococcus jannaschii / qualifier | |||||||
16S Identity %: 22.29822161422709
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| Property / Comparison to close relatives: Methanocaldococcus jannaschii / qualifier | |||||||
POCPu: 3.5999999999999996
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| Property / Comparison to close relatives: Methanocaldococcus jannaschii / qualifier | |||||||
G+C Difference (%): 0.13000000000000256
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobrevibacter cuticularis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobrevibacter cuticularis / qualifier | |||||||
16S Identity %: 22.264728385615914
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| Property / Comparison to close relatives: Methanobrevibacter cuticularis / qualifier | |||||||
POCPu: 2.450646698434309
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| Property / Comparison to close relatives: Methanobrevibacter cuticularis / qualifier | |||||||
G+C Difference (%): 4.630000000000003
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobacterium veterum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobacterium veterum / qualifier | |||||||
16S Identity %: 21.65795369678865
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| Property / Comparison to close relatives: Methanobacterium veterum / qualifier | |||||||
POCPu: 2.022634240308211
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| Property / Comparison to close relatives: Methanobacterium veterum / qualifier | |||||||
G+C Difference (%): 1.75
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobacterium paludis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobacterium paludis / qualifier | |||||||
16S Identity %: 21.653005464480874
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| Property / Comparison to close relatives: Methanobacterium paludis / qualifier | |||||||
POCPu: 2.3766546329723224
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| Property / Comparison to close relatives: Methanobacterium paludis / qualifier | |||||||
G+C Difference (%): 4.309999999999995
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobacterium oryzae / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobacterium oryzae / qualifier | |||||||
16S Identity %: 21.463414634146343
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanothermobacter wolfeii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanothermobacter wolfeii / qualifier | |||||||
POCPu: 3.493931592497242
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| Property / Comparison to close relatives: Methanothermobacter wolfeii / qualifier | |||||||
G+C Difference (%): 17.25
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| Property / CAZyme | |||||||
| Property / CAZyme: GH23 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH23 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GH28 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH28 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GH13 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH13 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GH0 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH0 / qualifier | |||||||
Occurance: 2
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| Property / CAZyme | |||||||
| Property / CAZyme: GT66 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT66 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT2 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT2 / qualifier | |||||||
Occurance: 9
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| Property / CAZyme | |||||||
| Property / CAZyme: GT1 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT1 / qualifier | |||||||
Occurance: 2
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| Property / CAZyme | |||||||
| Property / CAZyme: GT4 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT4 / qualifier | |||||||
Occurance: 7
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| Property / CAZyme | |||||||
| Property / CAZyme: GT0 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT0 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: CE14 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CE14 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: CBM50 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM50 / qualifier | |||||||
Occurance: 3
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| Property / Pathway | |||||||
| Property / Pathway: UDP-GalNAcA biosynthesis, UDP-GlcNAc => UDP-GalNAcA / rank | |||||||
Normal rank | |||||||
| Property / Pathway: UDP-GalNAcA biosynthesis, UDP-GlcNAc => UDP-GalNAcA / qualifier | |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: insect gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: mouse gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human vaginal metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: freshwater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Prevalence (%): 0.3
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| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: coral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: coral metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: coral metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: pig gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: chicken gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: marine metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: marine metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: plant metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: plant metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: plant metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: soil metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: soil metagenome / qualifier | |||||||
Prevalence (%): 0.1
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| Property / Ecosystem: soil metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human oral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: activated sludge metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: wastewater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: rhizosphere metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: marine sediment metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human lung metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: bovine gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human skin metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / MAGs | |||||||
| Property / MAGs: no MAG matches found / rank | |||||||
Normal rank | |||||||
Latest revision as of 02:22, 13 August 2026
genome assembly
| Language | Label | Description | Also known as |
|---|---|---|---|
| default for all languages | No label defined |
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| English | GCA_016432305.1 |
genome assembly |
Statements
no current description - please contribute here
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