GCA_021799635.1 (Q104850): Difference between revisions
Appearance
Added qualifier: 16S Identity % (P3): 70.65743944636678 |
Created claim: MAGs (P28): no MAG matches found (Q42716) |
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| Property / Comparison to close relatives: Natrinema salaciae / qualifier | |||||||
POCPu: 0.43509789702683105
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| Property / Comparison to close relatives: Natrinema salaciae / qualifier | |||||||
G+C Difference (%): 18.18
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Natrinema salsiterrestre / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Natrinema salsiterrestre / qualifier | |||||||
16S Identity %: 70.63273727647868
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| Property / Comparison to close relatives: Natrinema salsiterrestre / qualifier | |||||||
POCPu: 0.436442989634479
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| Property / Comparison to close relatives: Natrinema salsiterrestre / qualifier | |||||||
G+C Difference (%): 17.019999999999996
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Natrinema saccharevitans / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Natrinema saccharevitans / qualifier | |||||||
16S Identity %: 70.61643835616438
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| Property / Comparison to close relatives: Natrinema saccharevitans / qualifier | |||||||
POCPu: 0.5440468717304876
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| Property / Comparison to close relatives: Natrinema saccharevitans / qualifier | |||||||
G+C Difference (%): 18.509999999999998
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Natrinema limicola / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Natrinema limicola / qualifier | |||||||
16S Identity %: 70.61643835616438
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| Property / Comparison to close relatives: Natrinema limicola / qualifier | |||||||
POCPu: 0.5483207676490748
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| Property / Comparison to close relatives: Natrinema limicola / qualifier | |||||||
G+C Difference (%): 15.049999999999997
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Natrinema pallidum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Natrinema pallidum / qualifier | |||||||
16S Identity %: 70.54794520547945
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| Property / Comparison to close relatives: Natrinema pallidum / qualifier | |||||||
POCPu: 0.38338658146964855
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| Property / Comparison to close relatives: Natrinema pallidum / qualifier | |||||||
G+C Difference (%): 16.979999999999997
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Natrinema gari / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Natrinema gari / qualifier | |||||||
16S Identity %: 70.54794520547945
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| Property / Comparison to close relatives: Natrinema gari / qualifier | |||||||
POCPu: 0.39022386527007596
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| Property / Comparison to close relatives: Natrinema gari / qualifier | |||||||
G+C Difference (%): 16.979999999999997
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Natrinema mahii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Natrinema mahii / qualifier | |||||||
16S Identity %: 70.54794520547945
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| Property / Comparison to close relatives: Natrinema mahii / qualifier | |||||||
POCPu: 0.46163992086172784
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| Property / Comparison to close relatives: Natrinema mahii / qualifier | |||||||
G+C Difference (%): 18.359999999999992
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Halogeometricum borinquense / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Halogeometricum borinquense / qualifier | |||||||
16S Identity %: 70.52704576976421
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| Property / Comparison to close relatives: Halogeometricum borinquense / qualifier | |||||||
POCPu: 0.4656084656084656
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| Property / Comparison to close relatives: Halogeometricum borinquense / qualifier | |||||||
G+C Difference (%): 13.199999999999996
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Haloferax prahovense / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Haloferax prahovense / qualifier | |||||||
16S Identity %: 70.43895747599451
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| Property / Comparison to close relatives: Haloferax prahovense / qualifier | |||||||
POCPu: 0.570703868103995
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| Property / Comparison to close relatives: Haloferax prahovense / qualifier | |||||||
G+C Difference (%): 18.949999999999996
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Natrinema zhouii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Natrinema zhouii / qualifier | |||||||
16S Identity %: 70.34246575342465
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| Property / Comparison to close relatives: Natrinema zhouii / qualifier | |||||||
POCPu: 0.3708481135117704
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| Property / Comparison to close relatives: Natrinema zhouii / qualifier | |||||||
G+C Difference (%): 14.769999999999996
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Haloferax sulfurifontis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Haloferax sulfurifontis / qualifier | |||||||
16S Identity %: 70.32213845099383
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Natrinema thermotolerans / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Natrinema thermotolerans / qualifier | |||||||
16S Identity %: 70.29840388619014
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| Property / Comparison to close relatives: Natrinema thermotolerans / qualifier | |||||||
POCPu: 0.4061564771269773
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| Property / Comparison to close relatives: Natrinema thermotolerans / qualifier | |||||||
G+C Difference (%): 18.65
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Caldisphaera lagunensis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Caldisphaera lagunensis / qualifier | |||||||
16S Identity %: 69.86869384934347
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| Property / Comparison to close relatives: Caldisphaera lagunensis / qualifier | |||||||
POCPu: 1.9147084421235856
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| Property / Comparison to close relatives: Caldisphaera lagunensis / qualifier | |||||||
G+C Difference (%): 16.71
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Haloferax volcanii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Haloferax volcanii / qualifier | |||||||
POCPu: 0.6044185077115465
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| Property / Comparison to close relatives: Haloferax volcanii / qualifier | |||||||
G+C Difference (%): 18.740000000000002
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| Property / CAZyme | |||||||
| Property / CAZyme: GH0 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH0 / qualifier | |||||||
Occurance: 2
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| Property / CAZyme | |||||||
| Property / CAZyme: GH27 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH27 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT66 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT66 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT22 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT22 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT2 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT2 / qualifier | |||||||
Occurance: 7
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| Property / CAZyme | |||||||
| Property / CAZyme: GT4 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT4 / qualifier | |||||||
Occurance: 3
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| Property / CAZyme | |||||||
| Property / CAZyme: GT21 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT21 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: CBM50 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM50 / qualifier | |||||||
Occurance: 1
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| Property / Pathway | |||||||
| Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / qualifier | |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: insect gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: mouse gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human vaginal metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: freshwater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: coral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: coral metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: coral metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: pig gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: chicken gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: marine metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: marine metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: plant metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: plant metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: plant metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: soil metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: soil metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: soil metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human oral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: activated sludge metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: wastewater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: rhizosphere metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: marine sediment metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human lung metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: bovine gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human skin metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / MAGs | |||||||
| Property / MAGs: no MAG matches found / rank | |||||||
Normal rank | |||||||
Latest revision as of 01:55, 13 August 2026
genome assembly
| Language | Label | Description | Also known as |
|---|---|---|---|
| default for all languages | No label defined |
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| English | GCA_021799635.1 |
genome assembly |
Statements
no current description - please contribute here
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