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GCA_021799475.1 (Q104802): Difference between revisions

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Added qualifier: Domain (P9): Archaea (Q302)
 
(137 intermediate revisions by the same user not shown)
Property / GTDB: Archaea / qualifier
 
Property / GTDB: Archaea / qualifier
 
Property / GTDB: Archaea / qualifier
 
Property / GTDB: Archaea / qualifier
 
Property / GTDB: Archaea / qualifier
 
Property / GTDB: Archaea / qualifier
 
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Conexivisphaera calida / rank
 
Normal rank
Property / Comparison to close relatives: Conexivisphaera calida / qualifier
 
16S Identity %: 28.61975642760487
Amount28.61975642760487
Unit1
Property / Comparison to close relatives: Conexivisphaera calida / qualifier
 
POCPu: 1.4158576051779936
Amount1.4158576051779936
Unit1
Property / Comparison to close relatives: Conexivisphaera calida / qualifier
 
G+C Difference (%): 15.490000000000002
Amount15.490000000000002
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Thermoplasma volcanium / rank
 
Normal rank
Property / Comparison to close relatives: Thermoplasma volcanium / qualifier
 
16S Identity %: 26.387936943111722
Amount26.387936943111722
Unit1
Property / Comparison to close relatives: Thermoplasma volcanium / qualifier
 
POCPu: 2.4439102564102564
Amount2.4439102564102564
Unit1
Property / Comparison to close relatives: Thermoplasma volcanium / qualifier
 
G+C Difference (%): 6.659999999999997
Amount6.659999999999997
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Thermofilum adornatum / rank
 
Normal rank
Property / Comparison to close relatives: Thermofilum adornatum / qualifier
 
16S Identity %: 26.08695652173913
Amount26.08695652173913
Unit1
Property / Comparison to close relatives: Thermofilum adornatum / qualifier
 
POCPu: 1.058780576852866
Amount1.058780576852866
Unit1
Property / Comparison to close relatives: Thermofilum adornatum / qualifier
 
G+C Difference (%): 0.07000000000000028
Amount0.07000000000000028
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Caldisphaera lagunensis / rank
 
Normal rank
Property / Comparison to close relatives: Caldisphaera lagunensis / qualifier
 
16S Identity %: 25.25879917184265
Amount25.25879917184265
Unit1
Property / Comparison to close relatives: Caldisphaera lagunensis / qualifier
 
POCPu: 1.0071338648762065
Amount1.0071338648762065
Unit1
Property / Comparison to close relatives: Caldisphaera lagunensis / qualifier
 
G+C Difference (%): 16.549999999999997
Amount16.549999999999997
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanofollis liminatans / rank
 
Normal rank
Property / Comparison to close relatives: Methanofollis liminatans / qualifier
 
16S Identity %: 25.155065472088218
Amount25.155065472088218
Unit1
Property / Comparison to close relatives: Methanofollis liminatans / qualifier
 
POCPu: 1.0012135922330099
Amount1.0012135922330099
Unit1
Property / Comparison to close relatives: Methanofollis liminatans / qualifier
 
G+C Difference (%): 14.380000000000003
Amount14.380000000000003
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Sulfurihydrogenibium yellowstonense / rank
 
Normal rank
Property / Comparison to close relatives: Sulfurihydrogenibium yellowstonense / qualifier
 
16S Identity %: 25
Amount25
Unit1
Property / Comparison to close relatives: Sulfurihydrogenibium yellowstonense / qualifier
 
POCPu: 0.13083296990841692
Amount0.13083296990841692
Unit1
Property / Comparison to close relatives: Sulfurihydrogenibium yellowstonense / qualifier
 
G+C Difference (%): 13.759999999999998
Amount13.759999999999998
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanofollis tationis / rank
 
Normal rank
Property / Comparison to close relatives: Methanofollis tationis / qualifier
 
16S Identity %: 24.663359319631468
Amount24.663359319631468
Unit1
Property / Comparison to close relatives: Methanofollis tationis / qualifier
 
POCPu: 1.1037527593818985
Amount1.1037527593818985
Unit1
Property / Comparison to close relatives: Methanofollis tationis / qualifier
 
G+C Difference (%): 14.560000000000002
Amount14.560000000000002
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanofollis ethanolicus / rank
 
Normal rank
Property / Comparison to close relatives: Methanofollis ethanolicus / qualifier
 
16S Identity %: 24.64080459770115
Amount24.64080459770115
Unit1
Property / Comparison to close relatives: Methanofollis ethanolicus / qualifier
 
POCPu: 1.1376564277588168
Amount1.1376564277588168
Unit1
Property / Comparison to close relatives: Methanofollis ethanolicus / qualifier
 
G+C Difference (%): 13.75
Amount13.75
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanofollis aquaemaris / rank
 
Normal rank
Property / Comparison to close relatives: Methanofollis aquaemaris / qualifier
 
16S Identity %: 24.16212003117693
Amount24.16212003117693
Unit1
Property / Comparison to close relatives: Methanofollis aquaemaris / qualifier
 
POCPu: 1.2316715542521994
Amount1.2316715542521994
Unit1
Property / Comparison to close relatives: Methanofollis aquaemaris / qualifier
 
G+C Difference (%): 12.969999999999999
Amount12.969999999999999
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Thermoplasma acidophilum / rank
 
Normal rank
Property / Comparison to close relatives: Thermoplasma acidophilum / qualifier
 
16S Identity %: 23.972602739726025
Amount23.972602739726025
Unit1
Property / Comparison to close relatives: Thermoplasma acidophilum / qualifier
 
POCPu: 2.1004942339373973
Amount2.1004942339373973
Unit1
Property / Comparison to close relatives: Thermoplasma acidophilum / qualifier
 
G+C Difference (%): 0.5899999999999963
Amount0.5899999999999963
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanofollis fontis / rank
 
Normal rank
Property / Comparison to close relatives: Methanofollis fontis / qualifier
 
16S Identity %: 23.204022988505745
Amount23.204022988505745
Unit1
Property / Comparison to close relatives: Methanofollis fontis / qualifier
 
POCPu: 1.5228426395939088
Amount1.5228426395939088
Unit1
Property / Comparison to close relatives: Methanofollis fontis / qualifier
 
G+C Difference (%): 12.96
Amount12.96
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Microcaldus variisymbioticus / rank
 
Normal rank
Property / Comparison to close relatives: Microcaldus variisymbioticus / qualifier
 
16S Identity %: 22.893954410307234
Amount22.893954410307234
Unit1
Property / CAZyme
 
Property / CAZyme: GH19 / rank
 
Normal rank
Property / CAZyme: GH19 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GH0 / rank
 
Normal rank
Property / CAZyme: GH0 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT66 / rank
 
Normal rank
Property / CAZyme: GT66 / qualifier
 
Occurance: 2
Amount2
Unit1
Property / CAZyme
 
Property / CAZyme: GT2 / rank
 
Normal rank
Property / CAZyme: GT2 / qualifier
 
Occurance: 7
Amount7
Unit1
Property / CAZyme
 
Property / CAZyme: GT22 / rank
 
Normal rank
Property / CAZyme: GT22 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT1 / rank
 
Normal rank
Property / CAZyme: GT1 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT4 / rank
 
Normal rank
Property / CAZyme: GT4 / qualifier
 
Occurance: 6
Amount6
Unit1
Property / CAZyme
 
Property / CAZyme: GT21 / rank
 
Normal rank
Property / CAZyme: GT21 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT51 / rank
 
Normal rank
Property / CAZyme: GT51 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: CBM50 / rank
 
Normal rank
Property / CAZyme: CBM50 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / Pathway
 
Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / rank
 
Normal rank
Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / qualifier
 
Property / Pathway
 
Property / Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate / rank
 
Normal rank
Property / Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate / qualifier
 
Property / Pathway
 
Property / Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate / rank
 
Normal rank
Property / Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate / qualifier
 
Property / Pathway
 
Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / rank
 
Normal rank
Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / qualifier
 
Property / Ecosystem
 
Property / Ecosystem: insect gut metagenome / rank
 
Normal rank
Property / Ecosystem: insect gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: insect gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: mouse gut metagenome / rank
 
Normal rank
Property / Ecosystem: mouse gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: mouse gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human vaginal metagenome / rank
 
Normal rank
Property / Ecosystem: human vaginal metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human vaginal metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: freshwater metagenome / rank
 
Normal rank
Property / Ecosystem: freshwater metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: freshwater metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: coral metagenome / rank
 
Normal rank
Property / Ecosystem: coral metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: coral metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: pig gut metagenome / rank
 
Normal rank
Property / Ecosystem: pig gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: pig gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: chicken gut metagenome / rank
 
Normal rank
Property / Ecosystem: chicken gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: chicken gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine metagenome / rank
 
Normal rank
Property / Ecosystem: marine metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: marine metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: plant metagenome / rank
 
Normal rank
Property / Ecosystem: plant metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: plant metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: soil metagenome / rank
 
Normal rank
Property / Ecosystem: soil metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: soil metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human oral metagenome / rank
 
Normal rank
Property / Ecosystem: human oral metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human oral metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: activated sludge metagenome / rank
 
Normal rank
Property / Ecosystem: activated sludge metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: activated sludge metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: wastewater metagenome / rank
 
Normal rank
Property / Ecosystem: wastewater metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: wastewater metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: rhizosphere metagenome / rank
 
Normal rank
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine sediment metagenome / rank
 
Normal rank
Property / Ecosystem: marine sediment metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: marine sediment metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human lung metagenome / rank
 
Normal rank
Property / Ecosystem: human lung metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human lung metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: bovine gut metagenome / rank
 
Normal rank
Property / Ecosystem: bovine gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: bovine gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human skin metagenome / rank
 
Normal rank
Property / Ecosystem: human skin metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human skin metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human gut metagenome / rank
 
Normal rank
Property / Ecosystem: human gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / MAGs
 
Property / MAGs: no MAG matches found / rank
 
Normal rank

Latest revision as of 01:40, 13 August 2026

genome assembly
Language Label Description Also known as
default for all languages
No label defined
    English
    GCA_021799475.1
    genome assembly

      Statements

      no current description - please contribute here
      0 references
      28.61975642760487
      1.4158576051779936
      15.490000000000002
      0 references
      26.387936943111722
      2.4439102564102564
      6.659999999999997
      0 references
      26.08695652173913
      1.058780576852866
      0.07000000000000028
      0 references
      25.25879917184265
      1.0071338648762065
      16.549999999999997
      0 references
      25.155065472088218
      1.0012135922330099
      14.380000000000003
      0 references
      0 references
      24.663359319631468
      1.1037527593818985
      14.560000000000002
      0 references
      24.64080459770115
      1.1376564277588168
      0 references
      24.16212003117693
      1.2316715542521994
      12.969999999999999
      0 references
      23.972602739726025
      2.1004942339373973
      0.5899999999999963
      0 references
      23.204022988505745
      1.5228426395939088
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
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