GCA_001485605.1 (Q45726): Difference between revisions
Appearance
Added qualifier: 16S Identity % (P3): 80.65789473684211 |
Added qualifier: Ecosystem (P27): Generic (Q43559) |
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermoanaerobacter pentosaceus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermoanaerobacter pentosaceus / qualifier | |||||||
16S Identity %: 80.5921052631579
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermodesulfatator indicus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermodesulfatator indicus / qualifier | |||||||
16S Identity %: 80.58252427184466
| |||||||
| Property / Comparison to close relatives: Thermodesulfatator indicus / qualifier | |||||||
POCPu: 10.564147244609018
| |||||||
| Property / Comparison to close relatives: Thermodesulfatator indicus / qualifier | |||||||
G+C Difference (%): 6.020000000000003
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Parageobacillus thermoglucosidasius / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Parageobacillus thermoglucosidasius / qualifier | |||||||
16S Identity %: 80.4137039431157
| |||||||
| Property / Comparison to close relatives: Parageobacillus thermoglucosidasius / qualifier | |||||||
POCPu: 8.1902893575282
| |||||||
| Property / Comparison to close relatives: Parageobacillus thermoglucosidasius / qualifier | |||||||
G+C Difference (%): 7.480000000000004
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Desulfonauticus submarinus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Desulfonauticus submarinus / qualifier | |||||||
16S Identity %: 80.41237113402062
| |||||||
| Property / Comparison to close relatives: Desulfonauticus submarinus / qualifier | |||||||
POCPu: 8.206063369044905
| |||||||
| Property / Comparison to close relatives: Desulfonauticus submarinus / qualifier | |||||||
G+C Difference (%): 3.9399999999999977
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Parageobacillus thermantarcticus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Parageobacillus thermantarcticus / qualifier | |||||||
16S Identity %: 80.22049286640727
| |||||||
| Property / Comparison to close relatives: Parageobacillus thermantarcticus / qualifier | |||||||
POCPu: 8.074747128407338
| |||||||
| Property / Comparison to close relatives: Parageobacillus thermantarcticus / qualifier | |||||||
G+C Difference (%): 7.220000000000006
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Nitratidesulfovibrio liaohensis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Nitratidesulfovibrio liaohensis / qualifier | |||||||
16S Identity %: 80.1819363222872
| |||||||
| Property / Comparison to close relatives: Nitratidesulfovibrio liaohensis / qualifier | |||||||
POCPu: 5.109243697478991
| |||||||
| Property / Comparison to close relatives: Nitratidesulfovibrio liaohensis / qualifier | |||||||
G+C Difference (%): 29.38000000000001
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Desulfurobacterium indicum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Desulfurobacterium indicum / qualifier | |||||||
16S Identity %: 80
| |||||||
| Property / Comparison to close relatives: Desulfurobacterium indicum / qualifier | |||||||
POCPu: 10.15292053146152
| |||||||
| Property / Comparison to close relatives: Desulfurobacterium indicum / qualifier | |||||||
G+C Difference (%): 1.7600000000000051
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Geobacillus thermocatenulatus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Geobacillus thermocatenulatus / qualifier | |||||||
16S Identity %: 79.92227979274611
| |||||||
| Property / Comparison to close relatives: Geobacillus thermocatenulatus / qualifier | |||||||
POCPu: 8.116334122421373
| |||||||
| Property / Comparison to close relatives: Geobacillus thermocatenulatus / qualifier | |||||||
G+C Difference (%): 15.360000000000007
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Carbonactinospora thermoautotrophica / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Carbonactinospora thermoautotrophica / qualifier | |||||||
POCPu: 4.51054322022064
| |||||||
| Property / Comparison to close relatives: Carbonactinospora thermoautotrophica / qualifier | |||||||
G+C Difference (%): 34.56
| |||||||
| Property / Carbon source | |||||||
| Property / Carbon source: starch / rank | |||||||
Normal rank | |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH13 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH13 / qualifier | |||||||
Occurance: 5
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH38 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH38 / qualifier | |||||||
Occurance: 2
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH0 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH0 / qualifier | |||||||
Occurance: 12
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH3 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH3 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH31 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH31 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH6 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH6 / qualifier | |||||||
Occurance: 2
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH23 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH23 / qualifier | |||||||
Occurance: 6
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH2 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH2 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH94 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH94 / qualifier | |||||||
Occurance: 2
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH148 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH148 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH15 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH15 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH57 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH57 / qualifier | |||||||
Occurance: 4
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH43 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH43 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH28 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH28 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH109 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH109 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH20 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH20 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH101 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH101 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH105 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH105 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH1 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH1 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH130 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH130 / qualifier | |||||||
Occurance: 3
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH113 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH113 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH18 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH18 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH16 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH16 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH19 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH19 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT9 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT9 / qualifier | |||||||
Occurance: 10
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT2 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT2 / qualifier | |||||||
Occurance: 23
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT13 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT13 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT51 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT51 / qualifier | |||||||
Occurance: 3
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT35 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT35 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT4 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT4 / qualifier | |||||||
Occurance: 22
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT83 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT83 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT1 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT1 / qualifier | |||||||
Occurance: 3
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT5 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT5 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT0 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT0 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT28 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT28 / qualifier | |||||||
Occurance: 4
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT30 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT30 / qualifier | |||||||
Occurance: 2
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT19 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT19 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: PL0 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: PL0 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CE1 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CE1 / qualifier | |||||||
Occurance: 2
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CE11 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CE11 / qualifier | |||||||
Occurance: 4
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CE0 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CE0 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CE9 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CE9 / qualifier | |||||||
Occurance: 2
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CE4 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CE4 / qualifier | |||||||
Occurance: 3
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CE14 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CE14 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM5 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM5 / qualifier | |||||||
Occurance: 2
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM9 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM9 / qualifier | |||||||
Occurance: 3
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM50 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM50 / qualifier | |||||||
Occurance: 9
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM13 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM13 / qualifier | |||||||
Occurance: 3
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM48 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM48 / qualifier | |||||||
Occurance: 2
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM20 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM20 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM32 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM32 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM2 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM2 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM51 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM51 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / Pathway | |||||||
| Property / Pathway: Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Glycolysis, core module involving three-carbon compounds / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Glycolysis, core module involving three-carbon compounds / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / rank | |||||||
Normal rank | |||||||
| Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Ornithine biosynthesis, glutamate => ornithine / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Ornithine biosynthesis, glutamate => ornithine / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Adenine ribonucleotide biosynthesis, IMP => ADP, ATP / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Adenine ribonucleotide biosynthesis, IMP => ADP, ATP / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Guanine ribonucleotide biosynthesis, IMP => GDP, GTP / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Guanine ribonucleotide biosynthesis, IMP => GDP, GTP / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: CMP-KDO biosynthesis, ribulose-5P => CMP-KDO / rank | |||||||
Normal rank | |||||||
| Property / Pathway: CMP-KDO biosynthesis, ribulose-5P => CMP-KDO / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: beta-Oxidation, acyl-CoA synthesis / rank | |||||||
Normal rank | |||||||
| Property / Pathway: beta-Oxidation, acyl-CoA synthesis / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Triacylglycerol biosynthesis / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Triacylglycerol biosynthesis / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Lycopene biosynthesis, geranylgeranyl-PP => lycopene / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Lycopene biosynthesis, geranylgeranyl-PP => lycopene / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: NAD biosynthesis, aspartate => quinolinate => NAD / rank | |||||||
Normal rank | |||||||
| Property / Pathway: NAD biosynthesis, aspartate => quinolinate => NAD / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Coenzyme A biosynthesis, pantothenate => CoA / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Coenzyme A biosynthesis, pantothenate => CoA / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Heme biosynthesis, plants and bacteria, glutamate => heme / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Heme biosynthesis, plants and bacteria, glutamate => heme / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: CAM (Crassulacean acid metabolism), light / rank | |||||||
Normal rank | |||||||
| Property / Pathway: CAM (Crassulacean acid metabolism), light / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc / rank | |||||||
Normal rank | |||||||
| Property / Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Catechol meta-cleavage, catechol => acetyl-CoA / 4-methylcatechol => propanoyl-CoA / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Catechol meta-cleavage, catechol => acetyl-CoA / 4-methylcatechol => propanoyl-CoA / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Glycine cleavage system / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Glycine cleavage system / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Sulfur reduction, sulfur => sulfide / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Sulfur reduction, sulfur => sulfide / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine / rank | |||||||
Normal rank | |||||||
| Property / Pathway: PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man / rank | |||||||
Normal rank | |||||||
| Property / Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Zeaxanthin biosynthesis, lycopene => beta-carotene => zeaxanthin / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Zeaxanthin biosynthesis, lycopene => beta-carotene => zeaxanthin / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Tryptophan biosynthesis, chorismate => tryptophan / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Tryptophan biosynthesis, chorismate => tryptophan / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Histidine degradation, histidine => N-formiminoglutamate => glutamate / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Histidine degradation, histidine => N-formiminoglutamate => glutamate / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: De novo purine biosynthesis, PRPP + glutamine => IMP / rank | |||||||
Normal rank | |||||||
| Property / Pathway: De novo purine biosynthesis, PRPP + glutamine => IMP / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Fatty acid biosynthesis, initiation / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Fatty acid biosynthesis, initiation / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Fatty acid biosynthesis, elongation / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Fatty acid biosynthesis, elongation / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: beta-Oxidation / rank | |||||||
Normal rank | |||||||
| Property / Pathway: beta-Oxidation / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Mannose degradation / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Mannose degradation / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Tryptophan degradation / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Tryptophan degradation / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Tyrosine degradation II / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Tyrosine degradation II / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Aspartate degradation I / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Aspartate degradation I / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Alanine degradation II / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Alanine degradation II / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Glycine degradation / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Glycine degradation / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Methionine degradation II / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Methionine degradation II / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Proline degradation / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Proline degradation / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Serine degradation / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Serine degradation / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Threonine degradation II / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Threonine degradation II / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Arginine degradation I / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Arginine degradation I / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Histidine degradation / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Histidine degradation / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Pentose phosphate pathway (non-oxidative branch) / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Pentose phosphate pathway (non-oxidative branch) / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Pyruvate:ferredoxin oxidoreductase / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Pyruvate:ferredoxin oxidoreductase / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Acetyl-CoA to acetate / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Acetyl-CoA to acetate / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Acetyl-CoA to crotonyl-CoA / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Acetyl-CoA to crotonyl-CoA / qualifier | |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: insect gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: mouse gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human vaginal metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: freshwater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: coral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: coral metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: coral metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: pig gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: chicken gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: marine metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: marine metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: plant metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: plant metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: plant metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: soil metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: soil metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: soil metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human oral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: activated sludge metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: wastewater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: rhizosphere metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: marine sediment metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human lung metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: bovine gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human skin metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / MAGs | |||||||
| Property / MAGs: 3300000865_7.fna / rank | |||||||
Normal rank | |||||||
| Property / MAGs: 3300000865_7.fna / qualifier | |||||||
| Property / MAGs | |||||||
| Property / MAGs: 3300017389_6.fna / rank | |||||||
Normal rank | |||||||
| Property / MAGs: 3300017389_6.fna / qualifier | |||||||
Latest revision as of 09:44, 22 July 2026
genome assembly
| Language | Label | Description | Also known as |
|---|---|---|---|
| default for all languages | No label defined |
||
| English | GCA_001485605.1 |
genome assembly |
Statements
no current description - please contribute here
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