GCA_021798355.1 (Q104671): Difference between revisions
Appearance
Added qualifier: 16S Identity % (P3): 23.460207612456745 |
Created claim: MAGs (P28): no MAG matches found (Q42716) |
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| Property / Comparison to close relatives: Methanosalsum natronophilum / qualifier | |||||||
POCPu: 1.3249907986750091
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| Property / Comparison to close relatives: Methanosalsum natronophilum / qualifier | |||||||
G+C Difference (%): 1.6499999999999986
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanothermococcus okinawensis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanothermococcus okinawensis / qualifier | |||||||
16S Identity %: 23.328785811732605
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| Property / Comparison to close relatives: Methanothermococcus okinawensis / qualifier | |||||||
POCPu: 1.285240464344942
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| Property / Comparison to close relatives: Methanothermococcus okinawensis / qualifier | |||||||
G+C Difference (%): 6.710000000000001
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanocaldococcus lauensis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanocaldococcus lauensis / qualifier | |||||||
16S Identity %: 23.31334332833583
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| Property / Comparison to close relatives: Methanocaldococcus lauensis / qualifier | |||||||
POCPu: 1.4648858250753987
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| Property / Comparison to close relatives: Methanocaldococcus lauensis / qualifier | |||||||
G+C Difference (%): 6.940000000000001
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanothrix soehngenii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanothrix soehngenii / qualifier | |||||||
16S Identity %: 23.281143635125936
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| Property / Comparison to close relatives: Methanothrix soehngenii / qualifier | |||||||
POCPu: 0.8695652173913043
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| Property / Comparison to close relatives: Methanothrix soehngenii / qualifier | |||||||
G+C Difference (%): 15
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanosarcina semesiae / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanosarcina semesiae / qualifier | |||||||
16S Identity %: 23.18840579710145
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermoplasma volcanium / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermoplasma volcanium / qualifier | |||||||
16S Identity %: 23.160762942779293
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| Property / Comparison to close relatives: Thermoplasma volcanium / qualifier | |||||||
POCPu: 2.431865828092243
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| Property / Comparison to close relatives: Thermoplasma volcanium / qualifier | |||||||
G+C Difference (%): 3.9299999999999997
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanosalsum zhilinae / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanosalsum zhilinae / qualifier | |||||||
16S Identity %: 23.14165497896213
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| Property / Comparison to close relatives: Methanosalsum zhilinae / qualifier | |||||||
POCPu: 1.36986301369863
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| Property / Comparison to close relatives: Methanosalsum zhilinae / qualifier | |||||||
G+C Difference (%): 3.1699999999999946
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanococcus aeolicus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanococcus aeolicus / qualifier | |||||||
16S Identity %: 23.05593451568895
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| Property / Comparison to close relatives: Methanococcus aeolicus / qualifier | |||||||
POCPu: 1.4084507042253522
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| Property / Comparison to close relatives: Methanococcus aeolicus / qualifier | |||||||
G+C Difference (%): 5.950000000000003
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Nitrosopumilus maritimus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Nitrosopumilus maritimus / qualifier | |||||||
16S Identity %: 23.037037037037038
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| Property / Comparison to close relatives: Nitrosopumilus maritimus / qualifier | |||||||
POCPu: 1.1135857461024499
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| Property / Comparison to close relatives: Nitrosopumilus maritimus / qualifier | |||||||
G+C Difference (%): 1.8200000000000003
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Palaeococcus helgesonii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Palaeococcus helgesonii / qualifier | |||||||
16S Identity %: 23.03409881697982
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanotorris formicicus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanotorris formicicus / qualifier | |||||||
16S Identity %: 22.987721691678033
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| Property / Comparison to close relatives: Methanotorris formicicus / qualifier | |||||||
POCPu: 1.551533062430735
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| Property / Comparison to close relatives: Methanotorris formicicus / qualifier | |||||||
G+C Difference (%): 3.5500000000000043
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanococcus vannielii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanococcus vannielii / qualifier | |||||||
16S Identity %: 22.950819672131146
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| Property / Comparison to close relatives: Methanococcus vannielii / qualifier | |||||||
POCPu: 1.083032490974729
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| Property / Comparison to close relatives: Methanococcus vannielii / qualifier | |||||||
G+C Difference (%): 4.660000000000004
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanococcus voltae / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanococcus voltae / qualifier | |||||||
16S Identity %: 22.624743677375257
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| Property / Comparison to close relatives: Methanococcus voltae / qualifier | |||||||
POCPu: 1.3994910941475827
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| Property / Comparison to close relatives: Methanococcus voltae / qualifier | |||||||
G+C Difference (%): 7.0000000000000036
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanothermococcus thermolithotrophicus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanothermococcus thermolithotrophicus / qualifier | |||||||
16S Identity %: 22.542955326460483
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| Property / Comparison to close relatives: Methanothermococcus thermolithotrophicus / qualifier | |||||||
POCPu: 1.3152486642005754
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| Property / Comparison to close relatives: Methanothermococcus thermolithotrophicus / qualifier | |||||||
G+C Difference (%): 3.1000000000000014
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanocaldococcus vulcanius / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanocaldococcus vulcanius / qualifier | |||||||
16S Identity %: 22.331460674157302
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| Property / Comparison to close relatives: Methanocaldococcus vulcanius / qualifier | |||||||
POCPu: 1.674641148325359
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| Property / Comparison to close relatives: Methanocaldococcus vulcanius / qualifier | |||||||
G+C Difference (%): 4.410000000000004
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Nitrososphaera viennensis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Nitrososphaera viennensis / qualifier | |||||||
16S Identity %: 22.290388548057262
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| Property / Comparison to close relatives: Nitrososphaera viennensis / qualifier | |||||||
POCPu: 0.9835194045720361
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| Property / Comparison to close relatives: Nitrososphaera viennensis / qualifier | |||||||
G+C Difference (%): 16.729999999999997
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanocaldococcus indicus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanocaldococcus indicus / qualifier | |||||||
16S Identity %: 21.362668559261888
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanocaldococcus fervens / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanocaldococcus fervens / qualifier | |||||||
16S Identity %: 21.34602311352821
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| Property / Comparison to close relatives: Methanocaldococcus fervens / qualifier | |||||||
POCPu: 1.508169250104734
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| Property / Comparison to close relatives: Methanocaldococcus fervens / qualifier | |||||||
G+C Difference (%): 3.770000000000003
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| Property / CAZyme | |||||||
| Property / CAZyme: GH28 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH28 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GH15 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH15 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GH57 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH57 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GH1 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH1 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT3 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT3 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT22 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT22 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT1 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT1 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT4 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT4 / qualifier | |||||||
Occurance: 4
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| Property / CAZyme | |||||||
| Property / CAZyme: GT2 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT2 / qualifier | |||||||
Occurance: 4
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| Property / CAZyme | |||||||
| Property / CAZyme: CBM50 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM50 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: CBM2 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM2 / qualifier | |||||||
Occurance: 1
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| Property / Pathway | |||||||
| Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate / qualifier | |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: insect gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: mouse gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human vaginal metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: freshwater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: coral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: coral metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: coral metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: pig gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: chicken gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: marine metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: marine metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: plant metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: plant metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: plant metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: soil metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: soil metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: soil metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human oral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: activated sludge metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: wastewater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: rhizosphere metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: marine sediment metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human lung metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: bovine gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human skin metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / MAGs | |||||||
| Property / MAGs: no MAG matches found / rank | |||||||
Normal rank | |||||||
Latest revision as of 01:19, 13 August 2026
genome assembly
| Language | Label | Description | Also known as |
|---|---|---|---|
| default for all languages | No label defined |
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| English | GCA_021798355.1 |
genome assembly |
Statements
no current description - please contribute here
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