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GCA_021796225.1 (Q104036): Difference between revisions

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Added qualifier: POCPu (P4): 0.42928151830094896
 
(126 intermediate revisions by the same user not shown)
Property / Comparison to close relatives: Haloplanus salinus / qualifier
 
G+C Difference (%): 20.9
Amount20.9
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Natronosalvus amylolyticus / rank
 
Normal rank
Property / Comparison to close relatives: Natronosalvus amylolyticus / qualifier
 
16S Identity %: 26.899383983572893
Amount26.899383983572893
Unit1
Property / Comparison to close relatives: Natronosalvus amylolyticus / qualifier
 
POCPu: 0.4600585529067336
Amount0.4600585529067336
Unit1
Property / Comparison to close relatives: Natronosalvus amylolyticus / qualifier
 
G+C Difference (%): 14.170000000000002
Amount14.170000000000002
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Natronosalvus vescus / rank
 
Normal rank
Property / Comparison to close relatives: Natronosalvus vescus / qualifier
 
16S Identity %: 26.830937713894592
Amount26.830937713894592
Unit1
Property / Comparison to close relatives: Natronosalvus vescus / qualifier
 
POCPu: 0.42629571460623733
Amount0.42629571460623733
Unit1
Property / Comparison to close relatives: Natronosalvus vescus / qualifier
 
G+C Difference (%): 16.479999999999997
Amount16.479999999999997
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Saliphagus infecundisoli / rank
 
Normal rank
Property / Comparison to close relatives: Saliphagus infecundisoli / qualifier
 
16S Identity %: 26.744186046511626
Amount26.744186046511626
Unit1
Property / Comparison to close relatives: Saliphagus infecundisoli / qualifier
 
POCPu: 0.3345103140680171
Amount0.3345103140680171
Unit1
Property / Comparison to close relatives: Saliphagus infecundisoli / qualifier
 
G+C Difference (%): 18.880000000000003
Amount18.880000000000003
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Halorussus vallis / rank
 
Normal rank
Property / Comparison to close relatives: Halorussus vallis / qualifier
 
16S Identity %: 26.66209732693626
Amount26.66209732693626
Unit1
Property / Comparison to close relatives: Halorussus vallis / qualifier
 
POCPu: 0.3245644004099761
Amount0.3245644004099761
Unit1
Property / Comparison to close relatives: Halorussus vallis / qualifier
 
G+C Difference (%): 20.85
Amount20.85
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Halogranum amylolyticum / rank
 
Normal rank
Property / Comparison to close relatives: Halogranum amylolyticum / qualifier
 
16S Identity %: 26.04523646333105
Amount26.04523646333105
Unit1
Property / Comparison to close relatives: Halogranum amylolyticum / qualifier
 
POCPu: 0.4742436631234669
Amount0.4742436631234669
Unit1
Property / Comparison to close relatives: Halogranum amylolyticum / qualifier
 
G+C Difference (%): 17.54
Amount17.54
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Caldisphaera lagunensis / rank
 
Normal rank
Property / Comparison to close relatives: Caldisphaera lagunensis / qualifier
 
16S Identity %: 25.79092159559835
Amount25.79092159559835
Unit1
Property / Comparison to close relatives: Caldisphaera lagunensis / qualifier
 
POCPu: 1.6723842195540308
Amount1.6723842195540308
Unit1
Property / Comparison to close relatives: Caldisphaera lagunensis / qualifier
 
G+C Difference (%): 15.29
Amount15.29
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Halogranum rubrum / rank
 
Normal rank
Property / Comparison to close relatives: Halogranum rubrum / qualifier
 
16S Identity %: 25.753424657534246
Amount25.753424657534246
Unit1
Property / Comparison to close relatives: Halogranum rubrum / qualifier
 
POCPu: 0.5395348837209302
Amount0.5395348837209302
Unit1
Property / Comparison to close relatives: Halogranum rubrum / qualifier
 
G+C Difference (%): 16.880000000000003
Amount16.880000000000003
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Natronobiforma cellulositropha / rank
 
Normal rank
Property / Comparison to close relatives: Natronobiforma cellulositropha / qualifier
 
16S Identity %: 25.70621468926554
Amount25.70621468926554
Unit1
Property / Comparison to close relatives: Natronobiforma cellulositropha / qualifier
 
POCPu: 0.31876138433515483
Amount0.31876138433515483
Unit1
Property / Comparison to close relatives: Natronobiforma cellulositropha / qualifier
 
G+C Difference (%): 20.229999999999997
Amount20.229999999999997
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Halogranum salarium / rank
 
Normal rank
Property / Comparison to close relatives: Halogranum salarium / qualifier
 
16S Identity %: 24.894810659186536
Amount24.894810659186536
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Thermofilum adornatum / rank
 
Normal rank
Property / Comparison to close relatives: Thermofilum adornatum / qualifier
 
16S Identity %: 24.830393487109905
Amount24.830393487109905
Unit1
Property / Comparison to close relatives: Thermofilum adornatum / qualifier
 
POCPu: 1.1532738095238095
Amount1.1532738095238095
Unit1
Property / Comparison to close relatives: Thermofilum adornatum / qualifier
 
G+C Difference (%): 1.1899999999999977
Amount1.1899999999999977
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Microcaldus variisymbioticus / rank
 
Normal rank
Property / Comparison to close relatives: Microcaldus variisymbioticus / qualifier
 
16S Identity %: 23.68681863230922
Amount23.68681863230922
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Haloplanus natans / rank
 
Normal rank
Property / Comparison to close relatives: Haloplanus natans / qualifier
 
16S Identity %: 22.549691569568196
Amount22.549691569568196
Unit1
Property / Comparison to close relatives: Haloplanus natans / qualifier
 
POCPu: 0.2726510067114094
Amount0.2726510067114094
Unit1
Property / Comparison to close relatives: Haloplanus natans / qualifier
 
G+C Difference (%): 19.68
Amount19.68
Unit1
Property / CAZyme
 
Property / CAZyme: GH13 / rank
 
Normal rank
Property / CAZyme: GH13 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GH135 / rank
 
Normal rank
Property / CAZyme: GH135 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GH15 / rank
 
Normal rank
Property / CAZyme: GH15 / qualifier
 
Occurance: 2
Amount2
Unit1
Property / CAZyme
 
Property / CAZyme: GT66 / rank
 
Normal rank
Property / CAZyme: GT66 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT2 / rank
 
Normal rank
Property / CAZyme: GT2 / qualifier
 
Occurance: 10
Amount10
Unit1
Property / CAZyme
 
Property / CAZyme: GT22 / rank
 
Normal rank
Property / CAZyme: GT22 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT4 / rank
 
Normal rank
Property / CAZyme: GT4 / qualifier
 
Occurance: 5
Amount5
Unit1
Property / CAZyme
 
Property / CAZyme: CE14 / rank
 
Normal rank
Property / CAZyme: CE14 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: CBM50 / rank
 
Normal rank
Property / CAZyme: CBM50 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: CBM13 / rank
 
Normal rank
Property / CAZyme: CBM13 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / Pathway
 
Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / rank
 
Normal rank
Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / qualifier
 
Property / Pathway
 
Property / Pathway: Arginine degradation V / rank
 
Normal rank
Property / Pathway: Arginine degradation V / qualifier
 
Property / Ecosystem
 
Property / Ecosystem: insect gut metagenome / rank
 
Normal rank
Property / Ecosystem: insect gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: insect gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: mouse gut metagenome / rank
 
Normal rank
Property / Ecosystem: mouse gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: mouse gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human vaginal metagenome / rank
 
Normal rank
Property / Ecosystem: human vaginal metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human vaginal metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: freshwater metagenome / rank
 
Normal rank
Property / Ecosystem: freshwater metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: freshwater metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: coral metagenome / rank
 
Normal rank
Property / Ecosystem: coral metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: coral metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: pig gut metagenome / rank
 
Normal rank
Property / Ecosystem: pig gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: pig gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: chicken gut metagenome / rank
 
Normal rank
Property / Ecosystem: chicken gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: chicken gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine metagenome / rank
 
Normal rank
Property / Ecosystem: marine metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: marine metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: plant metagenome / rank
 
Normal rank
Property / Ecosystem: plant metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: plant metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: soil metagenome / rank
 
Normal rank
Property / Ecosystem: soil metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: soil metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human oral metagenome / rank
 
Normal rank
Property / Ecosystem: human oral metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human oral metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: activated sludge metagenome / rank
 
Normal rank
Property / Ecosystem: activated sludge metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: activated sludge metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: wastewater metagenome / rank
 
Normal rank
Property / Ecosystem: wastewater metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: wastewater metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: rhizosphere metagenome / rank
 
Normal rank
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine sediment metagenome / rank
 
Normal rank
Property / Ecosystem: marine sediment metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: marine sediment metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human lung metagenome / rank
 
Normal rank
Property / Ecosystem: human lung metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human lung metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: bovine gut metagenome / rank
 
Normal rank
Property / Ecosystem: bovine gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: bovine gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human skin metagenome / rank
 
Normal rank
Property / Ecosystem: human skin metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human skin metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human gut metagenome / rank
 
Normal rank
Property / Ecosystem: human gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / MAGs
 
Property / MAGs: no MAG matches found / rank
 
Normal rank

Latest revision as of 00:04, 13 August 2026

genome assembly
Language Label Description Also known as
default for all languages
No label defined
    English
    GCA_021796225.1
    genome assembly

      Statements

      no current description - please contribute here
      0 references
      27.328767123287673
      0.3393665158371041
      20.360000000000007
      0 references
      27.154582763337892
      0.41650138833796113
      0 references
      27.07333790267306
      0.42928151830094896
      0 references
      26.899383983572893
      0.4600585529067336
      14.170000000000002
      0 references
      26.830937713894592
      0.42629571460623733
      16.479999999999997
      0 references
      26.744186046511626
      0.3345103140680171
      18.880000000000003
      0 references
      26.66209732693626
      0.3245644004099761
      0 references
      26.04523646333105
      0.4742436631234669
      0 references
      25.79092159559835
      1.6723842195540308
      0 references
      25.753424657534246
      0.5395348837209302
      16.880000000000003
      0 references
      25.70621468926554
      0.31876138433515483
      20.229999999999997
      0 references
      24.894810659186536
      0 references
      24.830393487109905
      1.1532738095238095
      1.1899999999999977
      0 references
      0 references
      22.549691569568196
      0.2726510067114094
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
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