GCA_021785805.1 (Q102414): Difference between revisions
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Created a new Item |
Created claim: MAGs (P28): no MAG matches found (Q42716) |
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| Property / Protologue of the species | |||||||
no current description - please contribute here | |||||||
| Property / Protologue of the species: no current description - please contribute here / rank | |||||||
Normal rank | |||||||
| Property / Instance of | |||||||
| Property / Instance of: Genome Assembly Accession / rank | |||||||
Normal rank | |||||||
| Property / GTDB | |||||||
| Property / GTDB: Archaea / rank | |||||||
Normal rank | |||||||
| Property / GTDB: Archaea / qualifier | |||||||
| Property / GTDB: Archaea / qualifier | |||||||
| Property / GTDB: Archaea / qualifier | |||||||
| Property / GTDB: Archaea / qualifier | |||||||
| Property / GTDB: Archaea / qualifier | |||||||
| Property / GTDB: Archaea / qualifier | |||||||
| Property / GTDB: Archaea / qualifier | |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Microcaldus variisymbioticus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Microcaldus variisymbioticus / qualifier | |||||||
16S Identity %: 82.0079522862823
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermoplasma volcanium / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermoplasma volcanium / qualifier | |||||||
16S Identity %: 72.17272104180947
| |||||||
| Property / Comparison to close relatives: Thermoplasma volcanium / qualifier | |||||||
POCPu: 2.639751552795031
| |||||||
| Property / Comparison to close relatives: Thermoplasma volcanium / qualifier | |||||||
G+C Difference (%): 10.93
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Halostagnicola alkaliphila / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Halostagnicola alkaliphila / qualifier | |||||||
16S Identity %: 71.91780821917808
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Halostagnicola larsenii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Halostagnicola larsenii / qualifier | |||||||
16S Identity %: 71.83002056202878
| |||||||
| Property / Comparison to close relatives: Halostagnicola larsenii / qualifier | |||||||
POCPu: 0.3976933784052496
| |||||||
| Property / Comparison to close relatives: Halostagnicola larsenii / qualifier | |||||||
G+C Difference (%): 10.049999999999997
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Saliphagus infecundisoli / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Saliphagus infecundisoli / qualifier | |||||||
16S Identity %: 71.68262653898769
| |||||||
| Property / Comparison to close relatives: Saliphagus infecundisoli / qualifier | |||||||
POCPu: 0.38098693759071117
| |||||||
| Property / Comparison to close relatives: Saliphagus infecundisoli / qualifier | |||||||
G+C Difference (%): 13.350000000000001
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Halostagnicola bangensis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Halostagnicola bangensis / qualifier | |||||||
16S Identity %: 71.63426925845933
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Natronosalvus rutilus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Natronosalvus rutilus / qualifier | |||||||
16S Identity %: 71.61422708618332
| |||||||
| Property / Comparison to close relatives: Natronosalvus rutilus / qualifier | |||||||
POCPu: 0.4832785617630002
| |||||||
| Property / Comparison to close relatives: Natronosalvus rutilus / qualifier | |||||||
G+C Difference (%): 12.11
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Natronosalvus amylolyticus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Natronosalvus amylolyticus / qualifier | |||||||
16S Identity %: 71.61422708618332
| |||||||
| Property / Comparison to close relatives: Natronosalvus amylolyticus / qualifier | |||||||
POCPu: 0.5088540606554041
| |||||||
| Property / Comparison to close relatives: Natronosalvus amylolyticus / qualifier | |||||||
G+C Difference (%): 8.64
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Natronosalvus vescus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Natronosalvus vescus / qualifier | |||||||
16S Identity %: 71.61422708618332
| |||||||
| Property / Comparison to close relatives: Natronosalvus vescus / qualifier | |||||||
POCPu: 0.5884917175239756
| |||||||
| Property / Comparison to close relatives: Natronosalvus vescus / qualifier | |||||||
G+C Difference (%): 10.949999999999996
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermofilum adornatum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermofilum adornatum / qualifier | |||||||
16S Identity %: 71.4867617107943
| |||||||
| Property / Comparison to close relatives: Thermofilum adornatum / qualifier | |||||||
POCPu: 1.0287335934728628
| |||||||
| Property / Comparison to close relatives: Thermofilum adornatum / qualifier | |||||||
G+C Difference (%): 4.340000000000003
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Natronobiforma cellulositropha / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Natronobiforma cellulositropha / qualifier | |||||||
16S Identity %: 71.46892655367232
| |||||||
| Property / Comparison to close relatives: Natronobiforma cellulositropha / qualifier | |||||||
POCPu: 0.5748397081583021
| |||||||
| Property / Comparison to close relatives: Natronobiforma cellulositropha / qualifier | |||||||
G+C Difference (%): 14.699999999999996
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Natrialba swarupiae / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Natrialba swarupiae / qualifier | |||||||
16S Identity %: 71.14461960246744
| |||||||
| Property / Comparison to close relatives: Natrialba swarupiae / qualifier | |||||||
POCPu: 0.481251253258472
| |||||||
| Property / Comparison to close relatives: Natrialba swarupiae / qualifier | |||||||
G+C Difference (%): 11.670000000000002
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Halovivax cerinus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Halovivax cerinus / qualifier | |||||||
16S Identity %: 70.8751793400287
| |||||||
| Property / Comparison to close relatives: Halovivax cerinus / qualifier | |||||||
POCPu: 0.5171299288946347
| |||||||
| Property / Comparison to close relatives: Halovivax cerinus / qualifier | |||||||
G+C Difference (%): 14.109999999999992
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Halorussus vallis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Halorussus vallis / qualifier | |||||||
16S Identity %: 70.54794520547945
| |||||||
| Property / Comparison to close relatives: Halorussus vallis / qualifier | |||||||
POCPu: 0.4344193817878028
| |||||||
| Property / Comparison to close relatives: Halorussus vallis / qualifier | |||||||
G+C Difference (%): 15.32
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Haloplanus natans / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Haloplanus natans / qualifier | |||||||
16S Identity %: 70.39067854694997
| |||||||
| Property / Comparison to close relatives: Haloplanus natans / qualifier | |||||||
POCPu: 0.5307205552153501
| |||||||
| Property / Comparison to close relatives: Haloplanus natans / qualifier | |||||||
G+C Difference (%): 14.149999999999999
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Halogranum amylolyticum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Halogranum amylolyticum / qualifier | |||||||
16S Identity %: 70.362765229295
| |||||||
| Property / Comparison to close relatives: Halogranum amylolyticum / qualifier | |||||||
POCPu: 0.5123278898495036
| |||||||
| Property / Comparison to close relatives: Halogranum amylolyticum / qualifier | |||||||
G+C Difference (%): 12.009999999999998
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Haloplanus salinus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Haloplanus salinus / qualifier | |||||||
16S Identity %: 70.35003431708992
| |||||||
| Property / Comparison to close relatives: Haloplanus salinus / qualifier | |||||||
POCPu: 0.5924950625411455
| |||||||
| Property / Comparison to close relatives: Haloplanus salinus / qualifier | |||||||
G+C Difference (%): 15.369999999999997
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Halogranum rubrum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Halogranum rubrum / qualifier | |||||||
16S Identity %: 70.34246575342465
| |||||||
| Property / Comparison to close relatives: Halogranum rubrum / qualifier | |||||||
POCPu: 0.5630221576462041
| |||||||
| Property / Comparison to close relatives: Halogranum rubrum / qualifier | |||||||
G+C Difference (%): 11.350000000000001
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Caldisphaera lagunensis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Caldisphaera lagunensis / qualifier | |||||||
16S Identity %: 70.21423635107118
| |||||||
| Property / Comparison to close relatives: Caldisphaera lagunensis / qualifier | |||||||
POCPu: 1.0962241169305724
| |||||||
| Property / Comparison to close relatives: Caldisphaera lagunensis / qualifier | |||||||
G+C Difference (%): 20.82
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Haloplanus aerogenes / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Haloplanus aerogenes / qualifier | |||||||
16S Identity %: 69.89026063100137
| |||||||
| Property / Comparison to close relatives: Haloplanus aerogenes / qualifier | |||||||
POCPu: 0.6372225884421007
| |||||||
| Property / Comparison to close relatives: Haloplanus aerogenes / qualifier | |||||||
G+C Difference (%): 14.830000000000005
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Halogranum salarium / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Halogranum salarium / qualifier | |||||||
16S Identity %: 69.7967764540995
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Atribacter laminatus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Atribacter laminatus / qualifier | |||||||
16S Identity %: 64.5293315143247
| |||||||
| Property / Comparison to close relatives: Atribacter laminatus / qualifier | |||||||
POCPu: 0.43254933765882675
| |||||||
| Property / Comparison to close relatives: Atribacter laminatus / qualifier | |||||||
G+C Difference (%): 12.160000000000004
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH13 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH13 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH0 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH0 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT66 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT66 / qualifier | |||||||
Occurance: 2
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT22 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT22 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT2 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT2 / qualifier | |||||||
Occurance: 5
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT1 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT1 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT4 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT4 / qualifier | |||||||
Occurance: 4
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT51 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT51 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CE14 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CE14 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM50 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM50 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / Pathway | |||||||
| Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / qualifier | |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: insect gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: mouse gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human vaginal metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: freshwater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: coral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: coral metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: coral metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: pig gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: chicken gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: marine metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: marine metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: plant metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: plant metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: plant metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: soil metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: soil metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: soil metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human oral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: activated sludge metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: wastewater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: rhizosphere metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: marine sediment metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human lung metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: bovine gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human skin metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / MAGs | |||||||
| Property / MAGs: no MAG matches found / rank | |||||||
Normal rank | |||||||
Latest revision as of 19:59, 12 August 2026
genome assembly
| Language | Label | Description | Also known as |
|---|---|---|---|
| default for all languages | No label defined |
||
| English | GCA_021785805.1 |
genome assembly |
Statements
no current description - please contribute here
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