GCA_030154045.1 (Q101416): Difference between revisions
Appearance
Added qualifier: POCPu (P4): 4.768928220255654 |
Created claim: MAGs (P28): no MAG matches found (Q42716) |
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| (180 intermediate revisions by the same user not shown) | |||||||
| Property / Comparison to close relatives: Methanofervidicoccus abyssi / qualifier | |||||||
G+C Difference (%): 2
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermococcus henrietii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermococcus henrietii / qualifier | |||||||
16S Identity %: 25
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| Property / Comparison to close relatives: Thermococcus henrietii / qualifier | |||||||
POCPu: 3.6322725811636127
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| Property / Comparison to close relatives: Thermococcus henrietii / qualifier | |||||||
G+C Difference (%): 21.33
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermococcus eurythermalis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermococcus eurythermalis / qualifier | |||||||
16S Identity %: 24.948875255623722
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| Property / Comparison to close relatives: Thermococcus eurythermalis / qualifier | |||||||
POCPu: 3.50130890052356
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| Property / Comparison to close relatives: Thermococcus eurythermalis / qualifier | |||||||
G+C Difference (%): 20.200000000000003
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanotorris igneus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanotorris igneus / qualifier | |||||||
16S Identity %: 24.84599589322382
| |||||||
| Property / Comparison to close relatives: Methanotorris igneus / qualifier | |||||||
POCPu: 4.116968064640246
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| Property / Comparison to close relatives: Methanotorris igneus / qualifier | |||||||
G+C Difference (%): 0.9500000000000028
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermococcus celericrescens / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermococcus celericrescens / qualifier | |||||||
16S Identity %: 24.829467939972716
| |||||||
| Property / Comparison to close relatives: Thermococcus celericrescens / qualifier | |||||||
POCPu: 2.851996397478235
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| Property / Comparison to close relatives: Thermococcus celericrescens / qualifier | |||||||
G+C Difference (%): 21.04
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermococcus camini / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermococcus camini / qualifier | |||||||
16S Identity %: 24.829467939972716
| |||||||
| Property / Comparison to close relatives: Thermococcus camini / qualifier | |||||||
POCPu: 3.3220338983050843
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| Property / Comparison to close relatives: Thermococcus camini / qualifier | |||||||
G+C Difference (%): 21.380000000000003
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanotorris formicicus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanotorris formicicus / qualifier | |||||||
16S Identity %: 24.794520547945208
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| Property / Comparison to close relatives: Methanotorris formicicus / qualifier | |||||||
POCPu: 4.01899890390939
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| Property / Comparison to close relatives: Methanotorris formicicus / qualifier | |||||||
G+C Difference (%): 0.8100000000000023
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermococcus alcaliphilus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermococcus alcaliphilus / qualifier | |||||||
16S Identity %: 24.751066856330013
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| Property / Comparison to close relatives: Thermococcus alcaliphilus / qualifier | |||||||
POCPu: 4.1563930961606195
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| Property / Comparison to close relatives: Thermococcus alcaliphilus / qualifier | |||||||
G+C Difference (%): 9.780000000000001
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermococcus kodakarensis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermococcus kodakarensis / qualifier | |||||||
16S Identity %: 24.591280653950953
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| Property / Comparison to close relatives: Thermococcus kodakarensis / qualifier | |||||||
POCPu: 3.5275080906148863
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| Property / Comparison to close relatives: Thermococcus kodakarensis / qualifier | |||||||
G+C Difference (%): 18.75
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanocaldococcus vulcanius / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanocaldococcus vulcanius / qualifier | |||||||
16S Identity %: 24.55892731122089
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| Property / Comparison to close relatives: Methanocaldococcus vulcanius / qualifier | |||||||
POCPu: 4.29472025216706
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| Property / Comparison to close relatives: Methanocaldococcus vulcanius / qualifier | |||||||
G+C Difference (%): 1.6700000000000017
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanocaldococcus lauensis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanocaldococcus lauensis / qualifier | |||||||
16S Identity %: 24.508320726172467
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| Property / Comparison to close relatives: Methanocaldococcus lauensis / qualifier | |||||||
POCPu: 4.636324968098681
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| Property / Comparison to close relatives: Methanocaldococcus lauensis / qualifier | |||||||
G+C Difference (%): 4.199999999999999
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermococcus sibiricus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermococcus sibiricus / qualifier | |||||||
16S Identity %: 24.489795918367346
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| Property / Comparison to close relatives: Thermococcus sibiricus / qualifier | |||||||
POCPu: 3.609721229449607
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| Property / Comparison to close relatives: Thermococcus sibiricus / qualifier | |||||||
G+C Difference (%): 6.950000000000003
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Palaeococcus pacificus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Palaeococcus pacificus / qualifier | |||||||
16S Identity %: 24.4258872651357
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| Property / Comparison to close relatives: Palaeococcus pacificus / qualifier | |||||||
POCPu: 3.794723527285869
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| Property / Comparison to close relatives: Palaeococcus pacificus / qualifier | |||||||
G+C Difference (%): 9.79
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermococcus coalescens / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermococcus coalescens / qualifier | |||||||
16S Identity %: 24.38692098092643
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanothermococcus okinawensis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanothermococcus okinawensis / qualifier | |||||||
16S Identity %: 24.383561643835616
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| Property / Comparison to close relatives: Methanothermococcus okinawensis / qualifier | |||||||
POCPu: 4.095004095004095
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| Property / Comparison to close relatives: Methanothermococcus okinawensis / qualifier | |||||||
G+C Difference (%): 3.969999999999999
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermococcus atlanticus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermococcus atlanticus / qualifier | |||||||
16S Identity %: 24.33405327573794
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanocaldococcus jannaschii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanocaldococcus jannaschii / qualifier | |||||||
16S Identity %: 24.01091405184175
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| Property / Comparison to close relatives: Methanocaldococcus jannaschii / qualifier | |||||||
POCPu: 4.408440090429541
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| Property / Comparison to close relatives: Methanocaldococcus jannaschii / qualifier | |||||||
G+C Difference (%): 1.9600000000000009
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanocaldococcus bathoardescens / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanocaldococcus bathoardescens / qualifier | |||||||
16S Identity %: 23.92638036809816
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| Property / Comparison to close relatives: Methanocaldococcus bathoardescens / qualifier | |||||||
POCPu: 4.647370566653078
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| Property / Comparison to close relatives: Methanocaldococcus bathoardescens / qualifier | |||||||
G+C Difference (%): 2.460000000000001
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermococcus gorgonarius / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermococcus gorgonarius / qualifier | |||||||
16S Identity %: 23.772791023842917
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| Property / Comparison to close relatives: Thermococcus gorgonarius / qualifier | |||||||
POCPu: 4.392275653161681
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| Property / Comparison to close relatives: Thermococcus gorgonarius / qualifier | |||||||
G+C Difference (%): 18.42
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermococcus peptonophilus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermococcus peptonophilus / qualifier | |||||||
16S Identity %: 23.70266479663394
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| Property / Comparison to close relatives: Thermococcus peptonophilus / qualifier | |||||||
POCPu: 4.021164021164021
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| Property / Comparison to close relatives: Thermococcus peptonophilus / qualifier | |||||||
G+C Difference (%): 18.490000000000002
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanocaldococcus infernus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanocaldococcus infernus / qualifier | |||||||
16S Identity %: 23.48122866894198
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| Property / Comparison to close relatives: Methanocaldococcus infernus / qualifier | |||||||
POCPu: 4.575744113727232
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| Property / Comparison to close relatives: Methanocaldococcus infernus / qualifier | |||||||
G+C Difference (%): 0.36999999999999744
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermococcus cleftensis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermococcus cleftensis / qualifier | |||||||
16S Identity %: 23.29700272479564
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| Property / Comparison to close relatives: Thermococcus cleftensis / qualifier | |||||||
POCPu: 3.6127674500175377
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| Property / Comparison to close relatives: Thermococcus cleftensis / qualifier | |||||||
G+C Difference (%): 22.57
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| Property / CAZyme | |||||||
| Property / CAZyme: GH28 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH28 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GH57 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH57 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GH0 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH0 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT13 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT13 / qualifier | |||||||
Occurance: 2
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| Property / CAZyme | |||||||
| Property / CAZyme: GT66 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT66 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT3 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT3 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT22 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT22 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT2 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT2 / qualifier | |||||||
Occurance: 7
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| Property / CAZyme | |||||||
| Property / CAZyme: GT4 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT4 / qualifier | |||||||
Occurance: 4
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| Property / CAZyme | |||||||
| Property / CAZyme: GT0 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT0 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT32 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT32 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: CE14 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CE14 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: CBM50 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM50 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: CBM13 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM13 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: CBM12 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM12 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM48 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM48 / qualifier | |||||||
Occurance: 1
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| Property / Pathway | |||||||
| Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Pyruvate:ferredoxin oxidoreductase / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Pyruvate:ferredoxin oxidoreductase / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Acetyl-CoA to acetate / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Acetyl-CoA to acetate / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Lactate production / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Lactate production / qualifier | |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: insect gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: mouse gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human vaginal metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: freshwater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: coral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: coral metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: coral metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: pig gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: chicken gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: marine metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: marine metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: plant metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: plant metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: plant metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: soil metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: soil metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: soil metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human oral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: activated sludge metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: wastewater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: rhizosphere metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: marine sediment metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Prevalence (%): 0.1
| |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Relative abundance (%): 0.03
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human lung metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: bovine gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human skin metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / MAGs | |||||||
| Property / MAGs: no MAG matches found / rank | |||||||
Normal rank | |||||||
Latest revision as of 18:06, 12 August 2026
genome assembly
| Language | Label | Description | Also known as |
|---|---|---|---|
| default for all languages | No label defined |
||
| English | GCA_030154045.1 |
genome assembly |
Statements
no current description - please contribute here
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