GCA_016214025.1 (Q99974): Difference between revisions
Appearance
Added qualifier: G+C Difference (%) (P22): 2.289999999999999 |
Created claim: MAGs (P28): no MAG matches found (Q42716) |
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| (160 intermediate revisions by the same user not shown) | |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanosalsum natronophilum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanosalsum natronophilum / qualifier | |||||||
16S Identity %: 23.60248447204969
| |||||||
| Property / Comparison to close relatives: Methanosalsum natronophilum / qualifier | |||||||
POCPu: 2.562674094707521
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| Property / Comparison to close relatives: Methanosalsum natronophilum / qualifier | |||||||
G+C Difference (%): 4.979999999999997
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanolobus vulcani / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanolobus vulcani / qualifier | |||||||
16S Identity %: 23.57894736842105
| |||||||
| Property / Comparison to close relatives: Methanolobus vulcani / qualifier | |||||||
POCPu: 1.9147481194438112
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| Property / Comparison to close relatives: Methanolobus vulcani / qualifier | |||||||
G+C Difference (%): 0.8800000000000026
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanocorpusculum bavaricum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanocorpusculum bavaricum / qualifier | |||||||
16S Identity %: 23.456790123456788
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanohalophilus mahii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanohalophilus mahii / qualifier | |||||||
16S Identity %: 23.4375
| |||||||
| Property / Comparison to close relatives: Methanohalophilus mahii / qualifier | |||||||
POCPu: 2.093087303773065
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| Property / Comparison to close relatives: Methanohalophilus mahii / qualifier | |||||||
G+C Difference (%): 3.299999999999997
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanosarcina semesiae / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanosarcina semesiae / qualifier | |||||||
16S Identity %: 23.42778161713891
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanospirillum psychrodurum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanospirillum psychrodurum / qualifier | |||||||
16S Identity %: 23.347701149425287
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanolobus zinderi / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanolobus zinderi / qualifier | |||||||
16S Identity %: 23.317471108089734
| |||||||
| Property / Comparison to close relatives: Methanolobus zinderi / qualifier | |||||||
POCPu: 2.009815377424632
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| Property / Comparison to close relatives: Methanolobus zinderi / qualifier | |||||||
G+C Difference (%): 4.740000000000002
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanoculleus thermophilus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanoculleus thermophilus / qualifier | |||||||
16S Identity %: 23.266986959505832
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| Property / Comparison to close relatives: Methanoculleus thermophilus / qualifier | |||||||
POCPu: 1.8843572534847703
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| Property / Comparison to close relatives: Methanoculleus thermophilus / qualifier | |||||||
G+C Difference (%): 20
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanothermobacter marburgensis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanothermobacter marburgensis / qualifier | |||||||
16S Identity %: 23.186440677966104
| |||||||
| Property / Comparison to close relatives: Methanothermobacter marburgensis / qualifier | |||||||
POCPu: 2.494061757719715
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| Property / Comparison to close relatives: Methanothermobacter marburgensis / qualifier | |||||||
G+C Difference (%): 9.32
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanoregula boonei / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanoregula boonei / qualifier | |||||||
16S Identity %: 23.08752584424535
| |||||||
| Property / Comparison to close relatives: Methanoregula boonei / qualifier | |||||||
POCPu: 1.518804243008679
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| Property / Comparison to close relatives: Methanoregula boonei / qualifier | |||||||
G+C Difference (%): 15.189999999999998
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermococcus sibiricus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermococcus sibiricus / qualifier | |||||||
16S Identity %: 23.08214528173795
| |||||||
| Property / Comparison to close relatives: Thermococcus sibiricus / qualifier | |||||||
POCPu: 2.416918429003021
| |||||||
| Property / Comparison to close relatives: Thermococcus sibiricus / qualifier | |||||||
G+C Difference (%): 0.8800000000000026
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanolobus sediminis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanolobus sediminis / qualifier | |||||||
16S Identity %: 23.029891304347828
| |||||||
| Property / Comparison to close relatives: Methanolobus sediminis / qualifier | |||||||
POCPu: 2.0190299373404503
| |||||||
| Property / Comparison to close relatives: Methanolobus sediminis / qualifier | |||||||
G+C Difference (%): 1.6199999999999974
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanococcoides orientis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanococcoides orientis / qualifier | |||||||
16S Identity %: 23.014256619144604
| |||||||
| Property / Comparison to close relatives: Methanococcoides orientis / qualifier | |||||||
POCPu: 2.2367429002261874
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| Property / Comparison to close relatives: Methanococcoides orientis / qualifier | |||||||
G+C Difference (%): 3.3599999999999994
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Archaeoglobus veneficus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Archaeoglobus veneficus / qualifier | |||||||
16S Identity %: 22.99864314789688
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| Property / Comparison to close relatives: Archaeoglobus veneficus / qualifier | |||||||
POCPu: 2.385369732308508
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| Property / Comparison to close relatives: Archaeoglobus veneficus / qualifier | |||||||
G+C Difference (%): 7.729999999999997
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanospirillum hungatei / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanospirillum hungatei / qualifier | |||||||
16S Identity %: 22.888283378746593
| |||||||
| Property / Comparison to close relatives: Methanospirillum hungatei / qualifier | |||||||
POCPu: 1.3905442987683752
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| Property / Comparison to close relatives: Methanospirillum hungatei / qualifier | |||||||
G+C Difference (%): 5.829999999999998
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanothermobacter defluvii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanothermobacter defluvii / qualifier | |||||||
16S Identity %: 22.761970853573906
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Archaeoglobus sulfaticallidus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Archaeoglobus sulfaticallidus / qualifier | |||||||
16S Identity %: 22.74618585298197
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| Property / Comparison to close relatives: Archaeoglobus sulfaticallidus / qualifier | |||||||
POCPu: 2.224521469218831
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| Property / Comparison to close relatives: Archaeoglobus sulfaticallidus / qualifier | |||||||
G+C Difference (%): 3.9200000000000017
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanofervidicoccus abyssi / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanofervidicoccus abyssi / qualifier | |||||||
16S Identity %: 22.637661454792656
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| Property / Comparison to close relatives: Methanofervidicoccus abyssi / qualifier | |||||||
POCPu: 3.058741744873132
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| Property / Comparison to close relatives: Methanofervidicoccus abyssi / qualifier | |||||||
G+C Difference (%): 4.07
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Pyrococcus furiosus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Pyrococcus furiosus / qualifier | |||||||
16S Identity %: 21.98100407055631
| |||||||
| Property / Comparison to close relatives: Pyrococcus furiosus / qualifier | |||||||
POCPu: 2.6867275658248255
| |||||||
| Property / Comparison to close relatives: Pyrococcus furiosus / qualifier | |||||||
G+C Difference (%): 1.4500000000000028
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanothermobacter wolfeii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanothermobacter wolfeii / qualifier | |||||||
POCPu: 2.683208309290248
| |||||||
| Property / Comparison to close relatives: Methanothermobacter wolfeii / qualifier | |||||||
G+C Difference (%): 9.350000000000001
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH28 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH28 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH0 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH0 / qualifier | |||||||
Occurance: 2
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH3 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH3 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH16 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH16 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH38 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH38 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT13 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT13 / qualifier | |||||||
Occurance: 2
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT66 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT66 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT4 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT4 / qualifier | |||||||
Occurance: 6
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT2 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT2 / qualifier | |||||||
Occurance: 5
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CE14 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CE14 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM50 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM50 / qualifier | |||||||
Occurance: 2
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM13 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM13 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM20 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM20 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / Pathway | |||||||
| Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / rank | |||||||
Normal rank | |||||||
| Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Lactate production / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Lactate production / qualifier | |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: insect gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: mouse gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human vaginal metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: freshwater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Prevalence (%): 0.1
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| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: coral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: coral metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: coral metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: pig gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: chicken gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: marine metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: marine metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: plant metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: plant metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: plant metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: soil metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: soil metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: soil metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human oral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: activated sludge metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: wastewater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: rhizosphere metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: marine sediment metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human lung metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: bovine gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human skin metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / MAGs | |||||||
| Property / MAGs: no MAG matches found / rank | |||||||
Normal rank | |||||||
Latest revision as of 15:56, 12 August 2026
genome assembly
| Language | Label | Description | Also known as |
|---|---|---|---|
| default for all languages | No label defined |
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| English | GCA_016214025.1 |
genome assembly |
Statements
no current description - please contribute here
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2.683208309290248
9.350000000000001
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