GCA_030040895.1 (Q99067): Difference between revisions
Appearance
Added qualifier: 16S Identity % (P3): 25.252525252525253 |
Created claim: MAGs (P28): no MAG matches found (Q42716) |
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| Property / Comparison to close relatives: Methanofollis ethanolicus / qualifier | |||||||
POCPu: 1.206896551724138
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| Property / Comparison to close relatives: Methanofollis ethanolicus / qualifier | |||||||
G+C Difference (%): 13.559999999999995
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Halostagnicola larsenii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Halostagnicola larsenii / qualifier | |||||||
16S Identity %: 24.914442162902123
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| Property / Comparison to close relatives: Halostagnicola larsenii / qualifier | |||||||
POCPu: 0.4681457358029717
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| Property / Comparison to close relatives: Halostagnicola larsenii / qualifier | |||||||
G+C Difference (%): 14.129999999999995
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Haloplanus salinus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Haloplanus salinus / qualifier | |||||||
16S Identity %: 24.794520547945208
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| Property / Comparison to close relatives: Haloplanus salinus / qualifier | |||||||
POCPu: 0.6304886286872327
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| Property / Comparison to close relatives: Haloplanus salinus / qualifier | |||||||
G+C Difference (%): 19.449999999999996
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Haloplanus aerogenes / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Haloplanus aerogenes / qualifier | |||||||
16S Identity %: 24.794520547945208
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| Property / Comparison to close relatives: Haloplanus aerogenes / qualifier | |||||||
POCPu: 0.5862457722660654
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| Property / Comparison to close relatives: Haloplanus aerogenes / qualifier | |||||||
G+C Difference (%): 18.910000000000004
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Natrialba swarupiae / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Natrialba swarupiae / qualifier | |||||||
16S Identity %: 24.778761061946902
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| Property / Comparison to close relatives: Natrialba swarupiae / qualifier | |||||||
POCPu: 0.49271196879490864
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| Property / Comparison to close relatives: Natrialba swarupiae / qualifier | |||||||
G+C Difference (%): 15.75
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanofollis fontis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanofollis fontis / qualifier | |||||||
16S Identity %: 24.6031746031746
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| Property / Comparison to close relatives: Methanofollis fontis / qualifier | |||||||
POCPu: 1.3478818998716302
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| Property / Comparison to close relatives: Methanofollis fontis / qualifier | |||||||
G+C Difference (%): 12.769999999999996
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanofollis liminatans / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanofollis liminatans / qualifier | |||||||
16S Identity %: 24.51523545706371
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| Property / Comparison to close relatives: Methanofollis liminatans / qualifier | |||||||
POCPu: 1.012269938650307
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| Property / Comparison to close relatives: Methanofollis liminatans / qualifier | |||||||
G+C Difference (%): 14.189999999999998
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Natronobiforma cellulositropha / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Natronobiforma cellulositropha / qualifier | |||||||
16S Identity %: 24.47405329593268
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| Property / Comparison to close relatives: Natronobiforma cellulositropha / qualifier | |||||||
POCPu: 0.5672793283412753
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| Property / Comparison to close relatives: Natronobiforma cellulositropha / qualifier | |||||||
G+C Difference (%): 18.779999999999994
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Saliphagus infecundisoli / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Saliphagus infecundisoli / qualifier | |||||||
16S Identity %: 24.353741496598637
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| Property / Comparison to close relatives: Saliphagus infecundisoli / qualifier | |||||||
POCPu: 0.407709414381023
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| Property / Comparison to close relatives: Saliphagus infecundisoli / qualifier | |||||||
G+C Difference (%): 17.43
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Natronosalvus rutilus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Natronosalvus rutilus / qualifier | |||||||
16S Identity %: 24.065261726716518
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| Property / Comparison to close relatives: Natronosalvus rutilus / qualifier | |||||||
POCPu: 0.49436424757761516
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| Property / Comparison to close relatives: Natronosalvus rutilus / qualifier | |||||||
G+C Difference (%): 16.189999999999998
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Halorussus vallis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Halorussus vallis / qualifier | |||||||
16S Identity %: 23.94270122783083
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| Property / Comparison to close relatives: Halorussus vallis / qualifier | |||||||
POCPu: 0.46004430056227635
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| Property / Comparison to close relatives: Halorussus vallis / qualifier | |||||||
G+C Difference (%): 19.4
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanofollis tationis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanofollis tationis / qualifier | |||||||
16S Identity %: 23.914590747330962
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| Property / Comparison to close relatives: Methanofollis tationis / qualifier | |||||||
POCPu: 1.1483253588516746
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| Property / Comparison to close relatives: Methanofollis tationis / qualifier | |||||||
G+C Difference (%): 14.369999999999997
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Halostagnicola bangensis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Halostagnicola bangensis / qualifier | |||||||
16S Identity %: 23.32628611698379
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Haloplanus natans / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Haloplanus natans / qualifier | |||||||
16S Identity %: 22.976680384087793
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| Property / Comparison to close relatives: Haloplanus natans / qualifier | |||||||
POCPu: 0.5226845076311939
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| Property / Comparison to close relatives: Haloplanus natans / qualifier | |||||||
G+C Difference (%): 18.229999999999997
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanofollis aquaemaris / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanofollis aquaemaris / qualifier | |||||||
16S Identity %: 21.36150234741784
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| Property / Comparison to close relatives: Methanofollis aquaemaris / qualifier | |||||||
POCPu: 1.0373443983402488
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| Property / Comparison to close relatives: Methanofollis aquaemaris / qualifier | |||||||
G+C Difference (%): 12.779999999999994
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| Property / CAZyme | |||||||
| Property / CAZyme: GH13 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH13 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GH0 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH0 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT13 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT13 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT66 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT66 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT22 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT22 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT2 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT2 / qualifier | |||||||
Occurance: 9
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| Property / CAZyme | |||||||
| Property / CAZyme: GT1 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT1 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT4 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT4 / qualifier | |||||||
Occurance: 3
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| Property / CAZyme | |||||||
| Property / CAZyme: GT21 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT21 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT51 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT51 / qualifier | |||||||
Occurance: 1
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| Property / Pathway | |||||||
| Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Aspartate degradation II / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Aspartate degradation II / qualifier | |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: insect gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: mouse gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human vaginal metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: freshwater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: coral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: coral metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: coral metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: pig gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: chicken gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: marine metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: marine metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: plant metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: plant metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: plant metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: soil metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: soil metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: soil metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human oral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: activated sludge metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: wastewater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: rhizosphere metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: marine sediment metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human lung metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: bovine gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human skin metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / MAGs | |||||||
| Property / MAGs: no MAG matches found / rank | |||||||
Normal rank | |||||||
Latest revision as of 14:17, 12 August 2026
genome assembly
| Language | Label | Description | Also known as |
|---|---|---|---|
| default for all languages | No label defined |
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| English | GCA_030040895.1 |
genome assembly |
Statements
no current description - please contribute here
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