GCA_016188045.1 (Q96050): Difference between revisions
Appearance
Added qualifier: 16S Identity % (P3): 24.90974729241877 |
Created claim: MAGs (P28): no MAG matches found (Q42716) |
||||||
| (135 intermediate revisions by the same user not shown) | |||||||
| Property / Comparison to close relatives: Methanosphaera cuniculi / qualifier | |||||||
POCPu: 1.977793199167245
| |||||||
| Property / Comparison to close relatives: Methanosphaera cuniculi / qualifier | |||||||
G+C Difference (%): 2.360000000000003
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobacterium beijingense / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobacterium beijingense / qualifier | |||||||
16S Identity %: 24.710982658959537
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobrevibacter acididurans / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobrevibacter acididurans / qualifier | |||||||
16S Identity %: 24.57312546399406
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobacterium lacus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobacterium lacus / qualifier | |||||||
16S Identity %: 24.570575056011947
| |||||||
| Property / Comparison to close relatives: Methanobacterium lacus / qualifier | |||||||
POCPu: 1.9114951557999476
| |||||||
| Property / Comparison to close relatives: Methanobacterium lacus / qualifier | |||||||
G+C Difference (%): 5.389999999999997
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobacterium aggregans / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobacterium aggregans / qualifier | |||||||
16S Identity %: 24.566473988439306
| |||||||
| Property / Comparison to close relatives: Methanobacterium aggregans / qualifier | |||||||
POCPu: 2.2926691197282763
| |||||||
| Property / Comparison to close relatives: Methanobacterium aggregans / qualifier | |||||||
G+C Difference (%): 7.699999999999999
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanosphaera stadtmanae / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanosphaera stadtmanae / qualifier | |||||||
16S Identity %: 24.49421965317919
| |||||||
| Property / Comparison to close relatives: Methanosphaera stadtmanae / qualifier | |||||||
POCPu: 1.9305019305019304
| |||||||
| Property / Comparison to close relatives: Methanosphaera stadtmanae / qualifier | |||||||
G+C Difference (%): 2.8100000000000023
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobacterium congolense / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobacterium congolense / qualifier | |||||||
16S Identity %: 24.439624005784527
| |||||||
| Property / Comparison to close relatives: Methanobacterium congolense / qualifier | |||||||
POCPu: 2.1691378363536518
| |||||||
| Property / Comparison to close relatives: Methanobacterium congolense / qualifier | |||||||
G+C Difference (%): 8.05
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobrevibacter olleyae / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobrevibacter olleyae / qualifier | |||||||
16S Identity %: 24.401913875598087
| |||||||
| Property / Comparison to close relatives: Methanobrevibacter olleyae / qualifier | |||||||
POCPu: 1.9760285066407515
| |||||||
| Property / Comparison to close relatives: Methanobrevibacter olleyae / qualifier | |||||||
G+C Difference (%): 3.6400000000000006
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobacterium subterraneum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobacterium subterraneum / qualifier | |||||||
16S Identity %: 24.310595065312047
| |||||||
| Property / Comparison to close relatives: Methanobacterium subterraneum / qualifier | |||||||
POCPu: 1.820615796519411
| |||||||
| Property / Comparison to close relatives: Methanobacterium subterraneum / qualifier | |||||||
G+C Difference (%): 8.959999999999997
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobacterium ferruginis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobacterium ferruginis / qualifier | |||||||
16S Identity %: 24.295010845986983
| |||||||
| Property / Comparison to close relatives: Methanobacterium ferruginis / qualifier | |||||||
POCPu: 2.057710501419111
| |||||||
| Property / Comparison to close relatives: Methanobacterium ferruginis / qualifier | |||||||
G+C Difference (%): 6.949999999999999
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobacterium spitsbergense / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobacterium spitsbergense / qualifier | |||||||
16S Identity %: 23.893065998329156
| |||||||
| Property / Comparison to close relatives: Methanobacterium spitsbergense / qualifier | |||||||
POCPu: 1.8951513659857249
| |||||||
| Property / Comparison to close relatives: Methanobacterium spitsbergense / qualifier | |||||||
G+C Difference (%): 2.080000000000002
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Ferroplasma acidiphilum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Ferroplasma acidiphilum / qualifier | |||||||
16S Identity %: 23.878437047756872
| |||||||
| Property / Comparison to close relatives: Ferroplasma acidiphilum / qualifier | |||||||
POCPu: 1.471529110684581
| |||||||
| Property / Comparison to close relatives: Ferroplasma acidiphilum / qualifier | |||||||
G+C Difference (%): 6.050000000000001
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobrevibacter arboriphilus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobrevibacter arboriphilus / qualifier | |||||||
16S Identity %: 23.805732484076433
| |||||||
| Property / Comparison to close relatives: Methanobrevibacter arboriphilus / qualifier | |||||||
POCPu: 2.0030816640986133
| |||||||
| Property / Comparison to close relatives: Methanobrevibacter arboriphilus / qualifier | |||||||
G+C Difference (%): 5
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Picrophilus torridus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Picrophilus torridus / qualifier | |||||||
16S Identity %: 23.66136034732272
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Acidiplasma aeolicum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Acidiplasma aeolicum / qualifier | |||||||
16S Identity %: 23.6267870579383
| |||||||
| Property / Comparison to close relatives: Acidiplasma aeolicum / qualifier | |||||||
POCPu: 1.6409266409266408
| |||||||
| Property / Comparison to close relatives: Acidiplasma aeolicum / qualifier | |||||||
G+C Difference (%): 3.5399999999999956
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH28 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH28 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH0 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH0 / qualifier | |||||||
Occurance: 2
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH109 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH109 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH130 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH130 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT66 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT66 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT4 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT4 / qualifier | |||||||
Occurance: 10
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT2 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT2 / qualifier | |||||||
Occurance: 11
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT1 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT1 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CE14 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CE14 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM50 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM50 / qualifier | |||||||
Occurance: 2
| |||||||
| Property / Pathway | |||||||
| Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Acetate to acetyl-CoA / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Acetate to acetyl-CoA / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Lactate production / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Lactate production / qualifier | |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: insect gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: mouse gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human vaginal metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: freshwater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Prevalence (%): 0.5
| |||||||
| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: coral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: coral metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: coral metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: pig gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: chicken gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: marine metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: marine metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: plant metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: plant metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: plant metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: soil metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: soil metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: soil metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human oral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: activated sludge metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Prevalence (%): 0.1
| |||||||
| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: wastewater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: rhizosphere metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: marine sediment metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human lung metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: bovine gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human skin metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / MAGs | |||||||
| Property / MAGs: no MAG matches found / rank | |||||||
Normal rank | |||||||
Latest revision as of 07:27, 12 August 2026
genome assembly
| Language | Label | Description | Also known as |
|---|---|---|---|
| default for all languages | No label defined |
||
| English | GCA_016188045.1 |
genome assembly |
Statements
no current description - please contribute here
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references