GCA_021158055.1 (Q94512): Difference between revisions
Appearance
Added qualifier: G+C Difference (%) (P22): 14.440000000000001 |
Created claim: MAGs (P28): no MAG matches found (Q42716) |
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobacterium oryzae / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobacterium oryzae / qualifier | |||||||
16S Identity %: 76.75225537820958
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermococcus celericrescens / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermococcus celericrescens / qualifier | |||||||
16S Identity %: 76.72998643147896
| |||||||
| Property / Comparison to close relatives: Thermococcus celericrescens / qualifier | |||||||
POCPu: 3.8356164383561646
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| Property / Comparison to close relatives: Thermococcus celericrescens / qualifier | |||||||
G+C Difference (%): 12.219999999999999
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermococcus thioreducens / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermococcus thioreducens / qualifier | |||||||
16S Identity %: 76.7199444058374
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| Property / Comparison to close relatives: Thermococcus thioreducens / qualifier | |||||||
POCPu: 4.640234948604992
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| Property / Comparison to close relatives: Thermococcus thioreducens / qualifier | |||||||
G+C Difference (%): 11.380000000000003
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermococcus henrietii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermococcus henrietii / qualifier | |||||||
16S Identity %: 76.66214382632293
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| Property / Comparison to close relatives: Thermococcus henrietii / qualifier | |||||||
POCPu: 4.518950437317784
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| Property / Comparison to close relatives: Thermococcus henrietii / qualifier | |||||||
G+C Difference (%): 12.509999999999998
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermococcus eurythermalis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermococcus eurythermalis / qualifier | |||||||
16S Identity %: 76.59430122116689
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| Property / Comparison to close relatives: Thermococcus eurythermalis / qualifier | |||||||
POCPu: 4.681481481481482
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| Property / Comparison to close relatives: Thermococcus eurythermalis / qualifier | |||||||
G+C Difference (%): 11.380000000000003
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermococcus camini / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermococcus camini / qualifier | |||||||
16S Identity %: 76.52645861601086
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| Property / Comparison to close relatives: Thermococcus camini / qualifier | |||||||
POCPu: 4.894463138574488
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| Property / Comparison to close relatives: Thermococcus camini / qualifier | |||||||
G+C Difference (%): 12.560000000000002
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobacterium beijingense / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobacterium beijingense / qualifier | |||||||
16S Identity %: 76.47058823529412
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobacterium kanagiense / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobacterium kanagiense / qualifier | |||||||
16S Identity %: 76.4222069910898
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermococcus siculi / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermococcus siculi / qualifier | |||||||
16S Identity %: 76.41707487753673
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| Property / Comparison to close relatives: Thermococcus siculi / qualifier | |||||||
POCPu: 4.761904761904762
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| Property / Comparison to close relatives: Thermococcus siculi / qualifier | |||||||
G+C Difference (%): 12.920000000000002
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Palaeococcus helgesonii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Palaeococcus helgesonii / qualifier | |||||||
16S Identity %: 76.35983263598327
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobacterium congolense / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobacterium congolense / qualifier | |||||||
16S Identity %: 76.28294036061027
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| Property / Comparison to close relatives: Methanobacterium congolense / qualifier | |||||||
POCPu: 4.446381865736704
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| Property / Comparison to close relatives: Methanobacterium congolense / qualifier | |||||||
G+C Difference (%): 3.5799999999999983
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanothermobacter wolfeii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanothermobacter wolfeii / qualifier | |||||||
POCPu: 4.724677090414684
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| Property / Comparison to close relatives: Methanothermobacter wolfeii / qualifier | |||||||
G+C Difference (%): 6.600000000000001
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| Property / CAZyme | |||||||
| Property / CAZyme: GH133 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH133 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GH28 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH28 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GH57 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH57 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GH15 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH15 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GH19 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH19 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT66 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT66 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT3 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT3 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT2 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT2 / qualifier | |||||||
Occurance: 3
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| Property / CAZyme | |||||||
| Property / CAZyme: GT0 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT0 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT4 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT4 / qualifier | |||||||
Occurance: 7
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT61 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT61 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: CBM50 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM50 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: CBM5 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM5 / qualifier | |||||||
Occurance: 1
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| Property / Pathway | |||||||
| Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / rank | |||||||
Normal rank | |||||||
| Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Coenzyme A biosynthesis, pantothenate => CoA / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Coenzyme A biosynthesis, pantothenate => CoA / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc / rank | |||||||
Normal rank | |||||||
| Property / Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Pyruvate:ferredoxin oxidoreductase / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Pyruvate:ferredoxin oxidoreductase / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Pyruvate:formate lyase / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Pyruvate:formate lyase / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Lactate production / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Lactate production / qualifier | |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: insect gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: mouse gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human vaginal metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: freshwater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: coral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: coral metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: coral metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: pig gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: chicken gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: marine metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: marine metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: plant metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: plant metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: plant metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: soil metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: soil metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: soil metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human oral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: activated sludge metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: wastewater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: rhizosphere metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: marine sediment metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Prevalence (%): 0.3
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| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human lung metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: bovine gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human skin metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / MAGs | |||||||
| Property / MAGs: no MAG matches found / rank | |||||||
Normal rank | |||||||
Latest revision as of 03:27, 12 August 2026
genome assembly
| Language | Label | Description | Also known as |
|---|---|---|---|
| default for all languages | No label defined |
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| English | GCA_021158055.1 |
genome assembly |
Statements
no current description - please contribute here
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4.724677090414684
6.600000000000001
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