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‎Added qualifier: Ecosystem (P27): Human (Q43674)
 
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Property / Pathway: Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P / qualifier
 
Property / Pathway
 
Property / Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man / rank
 
Normal rank
Property / Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man / qualifier
 
Property / Pathway
 
Property / Pathway: Glycogen degradation, glycogen => glucose-6P / rank
 
Normal rank
Property / Pathway: Glycogen degradation, glycogen => glucose-6P / qualifier
 
Property / Pathway
 
Property / Pathway: Tryptophan biosynthesis, chorismate => tryptophan / rank
 
Normal rank
Property / Pathway: Tryptophan biosynthesis, chorismate => tryptophan / qualifier
 
Property / Pathway
 
Property / Pathway: De novo purine biosynthesis, PRPP + glutamine => IMP / rank
 
Normal rank
Property / Pathway: De novo purine biosynthesis, PRPP + glutamine => IMP / qualifier
 
Property / Pathway
 
Property / Pathway: Fatty acid biosynthesis, elongation / rank
 
Normal rank
Property / Pathway: Fatty acid biosynthesis, elongation / qualifier
 
Property / Pathway
 
Property / Pathway: Starch degradation / rank
 
Normal rank
Property / Pathway: Starch degradation / qualifier
 
Property / Pathway
 
Property / Pathway: Lactose degradation / rank
 
Normal rank
Property / Pathway: Lactose degradation / qualifier
 
Property / Pathway
 
Property / Pathway: Melibiose degradation / rank
 
Normal rank
Property / Pathway: Melibiose degradation / qualifier
 
Property / Pathway
 
Property / Pathway: Fructose degradation / rank
 
Normal rank
Property / Pathway: Fructose degradation / qualifier
 
Property / Pathway
 
Property / Pathway: Mannose degradation / rank
 
Normal rank
Property / Pathway: Mannose degradation / qualifier
 
Property / Pathway
 
Property / Pathway: Glutamine degradation II / rank
 
Normal rank
Property / Pathway: Glutamine degradation II / qualifier
 
Property / Pathway
 
Property / Pathway: Serine degradation / rank
 
Normal rank
Property / Pathway: Serine degradation / qualifier
 
Property / Pathway
 
Property / Pathway: Threonine degradation I / rank
 
Normal rank
Property / Pathway: Threonine degradation I / qualifier
 
Property / Pathway
 
Property / Pathway: Threonine degradation II / rank
 
Normal rank
Property / Pathway: Threonine degradation II / qualifier
 
Property / Pathway
 
Property / Pathway: Glycolysis (pay-off phase) / rank
 
Normal rank
Property / Pathway: Glycolysis (pay-off phase) / qualifier
 
Property / Pathway
 
Property / Pathway: Pyruvate:ferredoxin oxidoreductase / rank
 
Normal rank
Property / Pathway: Pyruvate:ferredoxin oxidoreductase / qualifier
 
Property / Pathway
 
Property / Pathway: Pyruvate:formate lyase / rank
 
Normal rank
Property / Pathway: Pyruvate:formate lyase / qualifier
 
Property / Pathway
 
Property / Pathway: Lactate consumption II / rank
 
Normal rank
Property / Pathway: Lactate consumption II / qualifier
 
Property / Pathway
 
Property / Pathway: Acetyl-CoA to acetate / rank
 
Normal rank
Property / Pathway: Acetyl-CoA to acetate / qualifier
 
Property / Pathway
 
Property / Pathway: Ethanol production I / rank
 
Normal rank
Property / Pathway: Ethanol production I / qualifier
 
Property / Pathway
 
Property / Pathway: Lactate production / rank
 
Normal rank
Property / Pathway: Lactate production / qualifier
 
Property / Pathway
 
Property / Pathway: Propionate production II / rank
 
Normal rank
Property / Pathway: Propionate production II / qualifier
 
Property / Ecosystem
 
Property / Ecosystem: insect gut metagenome / rank
 
Normal rank
Property / Ecosystem: insect gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: insect gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: mouse gut metagenome / rank
 
Normal rank
Property / Ecosystem: mouse gut metagenome / qualifier
 
Prevalence (%): 2.6
Amount2.6
Unit1
Property / Ecosystem: mouse gut metagenome / qualifier
 
Relative abundance (%): 0.03
Amount0.03
Unit1
Property / Ecosystem
 
Property / Ecosystem: human vaginal metagenome / rank
 
Normal rank
Property / Ecosystem: human vaginal metagenome / qualifier
 
Prevalence (%): 1.3
Amount1.3
Unit1
Property / Ecosystem: human vaginal metagenome / qualifier
 
Relative abundance (%): 0.36
Amount0.36
Unit1
Property / Ecosystem
 
Property / Ecosystem: freshwater metagenome / rank
 
Normal rank
Property / Ecosystem: freshwater metagenome / qualifier
 
Prevalence (%): 0.4
Amount0.4
Unit1
Property / Ecosystem: freshwater metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: coral metagenome / rank
 
Normal rank
Property / Ecosystem: coral metagenome / qualifier
 
Prevalence (%): 0.1
Amount0.1
Unit1
Property / Ecosystem: coral metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: pig gut metagenome / rank
 
Normal rank
Property / Ecosystem: pig gut metagenome / qualifier
 
Prevalence (%): 4.8
Amount4.8
Unit1
Property / Ecosystem: pig gut metagenome / qualifier
 
Relative abundance (%): 0.28
Amount0.28
Unit1
Property / Ecosystem
 
Property / Ecosystem: chicken gut metagenome / rank
 
Normal rank
Property / Ecosystem: chicken gut metagenome / qualifier
 
Prevalence (%): 66.6
Amount66.6
Unit1
Property / Ecosystem: chicken gut metagenome / qualifier
 
Relative abundance (%): 0.48
Amount0.48
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine metagenome / rank
 
Normal rank
Property / Ecosystem: marine metagenome / qualifier
 
Prevalence (%): 0.2
Amount0.2
Unit1
Property / Ecosystem: marine metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: plant metagenome / rank
 
Normal rank
Property / Ecosystem: plant metagenome / qualifier
 
Prevalence (%): 0.1
Amount0.1
Unit1
Property / Ecosystem: plant metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: soil metagenome / rank
 
Normal rank
Property / Ecosystem: soil metagenome / qualifier
 
Prevalence (%): 0.2
Amount0.2
Unit1
Property / Ecosystem: soil metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: human oral metagenome / rank
 
Normal rank
Property / Ecosystem: human oral metagenome / qualifier
 
Prevalence (%): 0.3
Amount0.3
Unit1
Property / Ecosystem: human oral metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: activated sludge metagenome / rank
 
Normal rank
Property / Ecosystem: activated sludge metagenome / qualifier
 
Prevalence (%): 2.9
Amount2.9
Unit1
Property / Ecosystem: activated sludge metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: wastewater metagenome / rank
 
Normal rank
Property / Ecosystem: wastewater metagenome / qualifier
 
Prevalence (%): 13
Amount13
Unit1
Property / Ecosystem: wastewater metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: rhizosphere metagenome / rank
 
Normal rank
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Prevalence (%): 0.5
Amount0.5
Unit1
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine sediment metagenome / rank
 
Normal rank
Property / Ecosystem: marine sediment metagenome / qualifier
 
Prevalence (%): 0.5
Amount0.5
Unit1
Property / Ecosystem: marine sediment metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: human lung metagenome / rank
 
Normal rank
Property / Ecosystem: human lung metagenome / qualifier
 
Prevalence (%): 0.1
Amount0.1
Unit1
Property / Ecosystem: human lung metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: bovine gut metagenome / rank
 
Normal rank
Property / Ecosystem: bovine gut metagenome / qualifier
 
Prevalence (%): 0.3
Amount0.3
Unit1
Property / Ecosystem: bovine gut metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: human skin metagenome / rank
 
Normal rank
Property / Ecosystem: human skin metagenome / qualifier
 
Prevalence (%): 0.2
Amount0.2
Unit1
Property / Ecosystem: human skin metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human gut metagenome / rank
 
Normal rank
Property / Ecosystem: human gut metagenome / qualifier
 
Prevalence (%): 29.1
Amount29.1
Unit1
Property / Ecosystem: human gut metagenome / qualifier
 
Relative abundance (%): 0.04
Amount0.04
Unit1
Property / MAGs
 
Property / MAGs: LiJ_2014__MH0370__bin_9.fa / rank
 
Normal rank
Property / MAGs: LiJ_2014__MH0370__bin_9.fa / qualifier
 
Property / MAGs
 
Property / MAGs: ERR414356_bin.58.fna / rank
 
Normal rank
Property / MAGs: ERR414356_bin.58.fna / qualifier
 

Latest revision as of 20:40, 21 July 2026

genome assembly
Language Label Description Also known as
default for all languages
No label defined
    English
    GCA_001305115.1
    genome assembly

      Statements

      Protologue of the species
      no current description - please contribute here
      0 references
      Comparison to close relatives
      Hydrogeniiclostridium mannosilyticum
      16S Identity %
      94.97686715135492
      POCPu
      41.55014672881063
      G+C Difference (%)
      3.460000000000001
      0 references
      Hominenteromicrobium mulieris
      16S Identity %
      94.05155320555188
      POCPu
      33.496247163553846
      G+C Difference (%)
      3.8699999999999974
      0 references
      Caproiciproducens galactitolivorans
      16S Identity %
      93.66736256089074
      POCPu
      42.53541590991646
      G+C Difference (%)
      0.759999999999998
      0 references
      Clostridium jeddahense
      16S Identity %
      93.15068493150685
      0 references
      Caproicibacter fermentans
      16S Identity %
      92.9279576999339
      POCPu
      34.558930388025
      G+C Difference (%)
      2.3699999999999974
      0 references
      Acutalibacter muris
      16S Identity %
      92.85232636547539
      POCPu
      25.59463008901211
      G+C Difference (%)
      5.780000000000001
      0 references
      Caproicibacterium amylolyticum
      16S Identity %
      92.48389405869722
      POCPu
      33.497119620467636
      G+C Difference (%)
      0.38000000000000256
      0 references
      Hydrogeniiclostridium hominis
      16S Identity %
      92.45014245014245
      0 references
      Thermocaproicibacter melissae
      16S Identity %
      91.66666666666666
      POCPu
      38.90146060481383
      G+C Difference (%)
      0.7800000000000011
      0 references
      Caproicibacterium lactatifermentans
      16S Identity %
      91.19589141599414
      POCPu
      37.04904742602351
      G+C Difference (%)
      1.509999999999998
      0 references
      Solibaculum mannosilyticum
      16S Identity %
      91.12181693048865
      POCPu
      34.116541353383454
      G+C Difference (%)
      1.7100000000000009
      0 references
      Clostridium sporosphaeroides
      16S Identity %
      90.8506075768406
      0 references
      Clostridium methylpentosum
      16S Identity %
      90.73333333333333
      POCPu
      27.601501194131693
      G+C Difference (%)
      1.8800000000000026
      0 references
      Clostridium leptum
      16S Identity %
      90.50167224080268
      POCPu
      36.3575155697694
      G+C Difference (%)
      1.3200000000000003
      0 references
      Ethanoligenens harbinense
      16S Identity %
      89.76588628762542
      POCPu
      22.252794496990543
      G+C Difference (%)
      6.700000000000003
      0 references
      Ruthenibacterium lactatiformans
      16S Identity %
      89.68042609853528
      POCPu
      23.721940622737147
      G+C Difference (%)
      7.649999999999999
      0 references
      Massiliimalia timonensis
      16S Identity %
      89.65287049399198
      POCPu
      27.80843866832829
      G+C Difference (%)
      1.9600000000000009
      0 references
      Tepidibaculum saccharolyticum
      16S Identity %
      89.56461644782308
      0 references
      Massiliimalia massiliensis
      16S Identity %
      89.54514596062457
      POCPu
      26.334147192186958
      G+C Difference (%)
      1.6700000000000017
      0 references
      Acetanaerobacterium elongatum
      16S Identity %
      89.3404397068621
      POCPu
      24.454910169195884
      G+C Difference (%)
      0.14999999999999858
      0 references
      Huintestinicola butyrica
      16S Identity %
      89.29521276595744
      POCPu
      22.761321075927818
      G+C Difference (%)
      2.4099999999999966
      0 references
      Butyricicoccus pullicaecorum
      16S Identity %
      89.23182441700959
      POCPu
      21.640574037834313
      G+C Difference (%)
      5.219999999999999
      0 references
      Anaerotruncus colihominis
      16S Identity %
      89.16363636363637
      POCPu
      28.807087215518557
      G+C Difference (%)
      5.299999999999997
      0 references
      Hydrogenoanaerobacterium saccharovorans
      16S Identity %
      88.97058823529412
      POCPu
      27.295618599966424
      G+C Difference (%)
      6.189999999999998
      0 references
      Agathobaculum butyriciproducens
      16S Identity %
      88.96151053013797
      POCPu
      23.593890386343215
      G+C Difference (%)
      5.369999999999997
      0 references
      Agathobaculum ammoniilyticum
      16S Identity %
      88.92572944297082
      POCPu
      22.670652715495766
      G+C Difference (%)
      8.090000000000003
      0 references
      Fournierella massiliensis
      16S Identity %
      88.80597014925374
      POCPu
      22.90735316787421
      G+C Difference (%)
      8.149999999999999
      0 references
      Clostridium facile
      16S Identity %
      88.72832369942196
      POCPu
      27.722772277227726
      G+C Difference (%)
      9.399999999999999
      0 references
      Clostridium cellulosi
      16S Identity %
      88.70320855614973
      POCPu
      25.183277194372895
      G+C Difference (%)
      4.710000000000001
      0 references
      Intestinimonas butyriciproducens
      16S Identity %
      88.32417582417582
      POCPu
      22.744970798182997
      G+C Difference (%)
      10.649999999999999
      0 references
      Butyricicoccus porcorum
      16S Identity %
      88.23529411764706
      POCPu
      20.184741703729046
      G+C Difference (%)
      3.6899999999999977
      0 references
      Hominimerdicola aceti
      16S Identity %
      88.19628647214854
      POCPu
      19.94512090550506
      G+C Difference (%)
      6.530000000000001
      0 references
      Gemmiger gallinarum
      16S Identity %
      88.08713410483323
      POCPu
      23.5574377977766
      G+C Difference (%)
      10.29
      0 references
      Lawsonibacter asaccharolyticus
      16S Identity %
      87.90983606557377
      POCPu
      20.712816997943797
      G+C Difference (%)
      9.520000000000003
      0 references
      Anaerofilum hominis
      16S Identity %
      87.85714285714286
      POCPu
      22.833275321963104
      G+C Difference (%)
      12.79
      0 references
      Flavonifractor plautii
      16S Identity %
      87.8162450066578
      POCPu
      23.496128648004767
      G+C Difference (%)
      12.11
      0 references
      Intestinimonas massiliensis
      16S Identity %
      87.80812791472353
      POCPu
      25.25235810028132
      G+C Difference (%)
      11.780000000000001
      0 references
      Faecalibacterium duncaniae
      16S Identity %
      87.7815699658703
      POCPu
      24.26756985605419
      G+C Difference (%)
      7.490000000000002
      0 references
      Pseudoflavonifractor capillosus
      16S Identity %
      87.69651401230348
      POCPu
      25.187644341801384
      G+C Difference (%)
      10.25
      0 references
      Faecalibacterium hattorii
      16S Identity %
      87.55948334466349
      POCPu
      23.176805407328352
      G+C Difference (%)
      8.880000000000003
      0 references
      Sporobacter termitidis
      16S Identity %
      87.54993342210386
      POCPu
      17.298091042584435
      G+C Difference (%)
      7.740000000000002
      0 references
      Flintibacter muris
      16S Identity %
      87.49172733289213
      POCPu
      18.322442992398987
      G+C Difference (%)
      6.960000000000001
      0 references
      Pseudobacteroides cellulosolvens
      16S Identity %
      87.49163879598663
      POCPu
      10.493343774471416
      G+C Difference (%)
      13.310000000000002
      0 references
      Faecalibacterium prausnitzii
      16S Identity %
      87.33744010951403
      POCPu
      23.09679641749914
      G+C Difference (%)
      7.590000000000003
      0 references
      Eubacterium siraeum
      16S Identity %
      87.24114896459587
      POCPu
      20.070618844081025
      G+C Difference (%)
      3.8699999999999974
      0 references
      Muriventricola aceti
      16S Identity %
      87.21854304635761
      POCPu
      23.42062193126023
      G+C Difference (%)
      6.950000000000003
      0 references
      Ruminiclostridium papyrosolvens
      16S Identity %
      87.17434869739479
      POCPu
      14.270167324173583
      G+C Difference (%)
      11.769999999999996
      0 references
      Oscillibacter acetigenes
      16S Identity %
      87.16931216931218
      0 references
      Youxingia wuxianensis
      16S Identity %
      86.90140845070422
      POCPu
      30.237050043898154
      G+C Difference (%)
      1.2100000000000009
      0 references
      Ligaoa zhengdingensis
      16S Identity %
      86.15600843288827
      POCPu
      33.30994562357481
      G+C Difference (%)
      8.170000000000002
      0 references
      Faecalispora jeddahensis
      POCPu
      32.4026679075539
      G+C Difference (%)
      3
      0 references
      Faecalispora sporosphaeroides
      POCPu
      34.90045173163794
      G+C Difference (%)
      4.68
      0 references
      Carbon source
      starch
      0 references
      CAZyme
      GH3
      Occurance
      6
      0 references
      GH2
      Occurance
      19
      0 references
      GH27
      Occurance
      1
      0 references
      GH136
      Occurance
      1
      0 references
      GH97
      Occurance
      2
      0 references
      GH127
      Occurance
      1
      0 references
      GH84
      Occurance
      1
      0 references
      GH31
      Occurance
      2
      0 references
      GH13
      Occurance
      9
      0 references
      GH29
      Occurance
      1
      0 references
      GH92
      Occurance
      2
      0 references
      GH30
      Occurance
      1
      0 references
      GH43
      Occurance
      3
      0 references
      GH0
      Occurance
      3
      0 references
      GH6
      Occurance
      2
      0 references
      GH38
      Occurance
      2
      0 references
      GH25
      Occurance
      2
      0 references
      GH28
      Occurance
      1
      0 references
      GH77
      Occurance
      1
      0 references
      GH63
      Occurance
      2
      0 references
      GH78
      Occurance
      1
      0 references
      GH101
      Occurance
      1
      0 references
      GH18
      Occurance
      1
      0 references
      GH73
      Occurance
      1
      0 references
      GH19
      Occurance
      1
      0 references
      GH114
      Occurance
      1
      0 references
      GH23
      Occurance
      2
      0 references
      GT35
      Occurance
      2
      0 references
      GT51
      Occurance
      1
      0 references
      GT13
      Occurance
      1
      0 references
      GT4
      Occurance
      23
      0 references
      GT2
      Occurance
      18
      0 references
      GT8
      Occurance
      1
      0 references
      GT32
      Occurance
      1
      0 references
      GT5
      Occurance
      2
      0 references
      GT28
      Occurance
      6
      0 references
      GT1
      Occurance
      1
      0 references
      GT0
      Occurance
      3
      0 references
      GT26
      Occurance
      2
      0 references
      PL8
      Occurance
      1
      0 references
      CE4
      Occurance
      4
      0 references
      CE0
      Occurance
      2
      0 references
      CE12
      Occurance
      1
      0 references
      CE1
      Occurance
      1
      0 references
      CE9
      Occurance
      1
      0 references
      CBM32
      Occurance
      4
      0 references
      CBM51
      Occurance
      7
      0 references
      CBM71
      Occurance
      1
      0 references
      CBM66
      Occurance
      1
      0 references
      CBM35
      Occurance
      1
      0 references
      CBM6
      Occurance
      2
      0 references
      CBM50
      Occurance
      16
      0 references
      CBM48
      Occurance
      4
      0 references
      CBM13
      Occurance
      2
      0 references
      CBM5
      Occurance
      1
      0 references
      CBM2
      Occurance
      1
      0 references
      CBM12
      Occurance
      1
      0 references
      Pathway
      Ecosystem
       
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