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‎Created claim: CAZyme (P23): GT9 (Q42878)
 
(130 intermediate revisions by the same user not shown)
Property / CAZyme: GT9 / qualifier
 
Occurance: 5
Amount5
Unit1
Property / CAZyme
 
Property / CAZyme: GT55 / rank
 
Normal rank
Property / CAZyme: GT55 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: PL12 / rank
 
Normal rank
Property / CAZyme: PL12 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: CE1 / rank
 
Normal rank
Property / CAZyme: CE1 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: CE11 / rank
 
Normal rank
Property / CAZyme: CE11 / qualifier
 
Occurance: 4
Amount4
Unit1
Property / CAZyme
 
Property / CAZyme: CE4 / rank
 
Normal rank
Property / CAZyme: CE4 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: CE14 / rank
 
Normal rank
Property / CAZyme: CE14 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: CBM50 / rank
 
Normal rank
Property / CAZyme: CBM50 / qualifier
 
Occurance: 7
Amount7
Unit1
Property / CAZyme
 
Property / CAZyme: CBM13 / rank
 
Normal rank
Property / CAZyme: CBM13 / qualifier
 
Occurance: 3
Amount3
Unit1
Property / CAZyme
 
Property / CAZyme: CBM32 / rank
 
Normal rank
Property / CAZyme: CBM32 / qualifier
 
Occurance: 3
Amount3
Unit1
Property / CAZyme
 
Property / CAZyme: CBM9 / rank
 
Normal rank
Property / CAZyme: CBM9 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: CBM6 / rank
 
Normal rank
Property / CAZyme: CBM6 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: CBM20 / rank
 
Normal rank
Property / CAZyme: CBM20 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: CBM5 / rank
 
Normal rank
Property / CAZyme: CBM5 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: CBM48 / rank
 
Normal rank
Property / CAZyme: CBM48 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: CBM51 / rank
 
Normal rank
Property / CAZyme: CBM51 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: CBM2 / rank
 
Normal rank
Property / CAZyme: CBM2 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / Pathway
 
Property / Pathway: Gluconeogenesis, oxaloacetate => fructose-6P / rank
 
Normal rank
Property / Pathway: Gluconeogenesis, oxaloacetate => fructose-6P / qualifier
 
Property / Pathway
 
Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / rank
 
Normal rank
Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / qualifier
 
Property / Pathway
 
Property / Pathway: Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P / rank
 
Normal rank
Property / Pathway: Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P / qualifier
 
Property / Pathway
 
Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / rank
 
Normal rank
Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / qualifier
 
Property / Pathway
 
Property / Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate / rank
 
Normal rank
Property / Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate / qualifier
 
Property / Pathway
 
Property / Pathway: Triacylglycerol biosynthesis / rank
 
Normal rank
Property / Pathway: Triacylglycerol biosynthesis / qualifier
 
Property / Pathway
 
Property / Pathway: Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE / rank
 
Normal rank
Property / Pathway: Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE / qualifier
 
Property / Pathway
 
Property / Pathway: Coenzyme A biosynthesis, pantothenate => CoA / rank
 
Normal rank
Property / Pathway: Coenzyme A biosynthesis, pantothenate => CoA / qualifier
 
Property / Pathway
 
Property / Pathway: Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD / rank
 
Normal rank
Property / Pathway: Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD / qualifier
 
Property / Pathway
 
Property / Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA / rank
 
Normal rank
Property / Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA / qualifier
 
Property / Pathway
 
Property / Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man / rank
 
Normal rank
Property / Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man / qualifier
 
Property / Pathway
 
Property / Pathway: GDP-D-Rha biosynthesis, GDP-Man => GDP-D-Rha / rank
 
Normal rank
Property / Pathway: GDP-D-Rha biosynthesis, GDP-Man => GDP-D-Rha / qualifier
 
Property / Pathway
 
Property / Pathway: Fatty acid biosynthesis, initiation / rank
 
Normal rank
Property / Pathway: Fatty acid biosynthesis, initiation / qualifier
 
Property / Pathway
 
Property / Pathway: Aspartate degradation I / rank
 
Normal rank
Property / Pathway: Aspartate degradation I / qualifier
 
Property / Pathway
 
Property / Pathway: Alanine degradation II / rank
 
Normal rank
Property / Pathway: Alanine degradation II / qualifier
 
Property / Pathway
 
Property / Pathway: Cysteine degradation II / rank
 
Normal rank
Property / Pathway: Cysteine degradation II / qualifier
 
Property / Pathway
 
Property / Pathway: Glutamine degradation II / rank
 
Normal rank
Property / Pathway: Glutamine degradation II / qualifier
 
Property / Pathway
 
Property / Pathway: Threonine degradation II / rank
 
Normal rank
Property / Pathway: Threonine degradation II / qualifier
 
Property / Pathway
 
Property / Pathway: Pentose phosphate pathway (non-oxidative branch) / rank
 
Normal rank
Property / Pathway: Pentose phosphate pathway (non-oxidative branch) / qualifier
 
Property / Pathway
 
Property / Pathway: Pyruvate:ferredoxin oxidoreductase / rank
 
Normal rank
Property / Pathway: Pyruvate:ferredoxin oxidoreductase / qualifier
 
Property / Ecosystem
 
Property / Ecosystem: insect gut metagenome / rank
 
Normal rank
Property / Ecosystem: insect gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: insect gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: mouse gut metagenome / rank
 
Normal rank
Property / Ecosystem: mouse gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: mouse gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human vaginal metagenome / rank
 
Normal rank
Property / Ecosystem: human vaginal metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human vaginal metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: freshwater metagenome / rank
 
Normal rank
Property / Ecosystem: freshwater metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: freshwater metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: coral metagenome / rank
 
Normal rank
Property / Ecosystem: coral metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: coral metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: pig gut metagenome / rank
 
Normal rank
Property / Ecosystem: pig gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: pig gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: chicken gut metagenome / rank
 
Normal rank
Property / Ecosystem: chicken gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: chicken gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine metagenome / rank
 
Normal rank
Property / Ecosystem: marine metagenome / qualifier
 
Prevalence (%): 0.1
Amount0.1
Unit1
Property / Ecosystem: marine metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: plant metagenome / rank
 
Normal rank
Property / Ecosystem: plant metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: plant metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: soil metagenome / rank
 
Normal rank
Property / Ecosystem: soil metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: soil metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human oral metagenome / rank
 
Normal rank
Property / Ecosystem: human oral metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human oral metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: activated sludge metagenome / rank
 
Normal rank
Property / Ecosystem: activated sludge metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: activated sludge metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: wastewater metagenome / rank
 
Normal rank
Property / Ecosystem: wastewater metagenome / qualifier
 
Prevalence (%): 0.1
Amount0.1
Unit1
Property / Ecosystem: wastewater metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: rhizosphere metagenome / rank
 
Normal rank
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine sediment metagenome / rank
 
Normal rank
Property / Ecosystem: marine sediment metagenome / qualifier
 
Prevalence (%): 0.6
Amount0.6
Unit1
Property / Ecosystem: marine sediment metagenome / qualifier
 
Relative abundance (%): 0.02
Amount0.02
Unit1
Property / Ecosystem
 
Property / Ecosystem: human lung metagenome / rank
 
Normal rank
Property / Ecosystem: human lung metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human lung metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: bovine gut metagenome / rank
 
Normal rank
Property / Ecosystem: bovine gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: bovine gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human skin metagenome / rank
 
Normal rank
Property / Ecosystem: human skin metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human skin metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human gut metagenome / rank
 
Normal rank
Property / Ecosystem: human gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / MAGs
 
Property / MAGs: no MAG matches found / rank
 
Normal rank

Latest revision as of 20:21, 21 July 2026

genome assembly
Language Label Description Also known as
default for all languages
No label defined
    English
    GCA_001304225.1
    genome assembly

      Statements

      Protologue of the species
      no current description - please contribute here
      0 references
      Comparison to close relatives
      Syntrophotalea carbinolica
      16S Identity %
      82.76983094928478
      POCPu
      6.3204124498758825
      G+C Difference (%)
      10.990000000000002
      0 references
      Calorithrix insularis
      16S Identity %
      82.71777003484321
      0 references
      Syntrophotalea acetylenica
      16S Identity %
      82.31070496083551
      POCPu
      6.9020546578894875
      G+C Difference (%)
      13.300000000000004
      0 references
      Geopsychrobacter electrodiphilus
      16S Identity %
      82.2742474916388
      POCPu
      5.515141262053798
      G+C Difference (%)
      9.090000000000003
      0 references
      Desulfuromonas michiganensis
      16S Identity %
      82.17362491716369
      0 references
      Desulfosudis oleivorans
      16S Identity %
      82.17306441119064
      POCPu
      5.612052730696798
      G+C Difference (%)
      12.050000000000004
      0 references
      Geothermobacter hydrogeniphilus
      16S Identity %
      82.1685173089484
      POCPu
      6.803232475098666
      G+C Difference (%)
      15.270000000000003
      0 references
      Desulfobacca acetoxidans
      16S Identity %
      82.0378837361202
      POCPu
      7.2566014916347505
      G+C Difference (%)
      8.770000000000003
      0 references
      Geoalkalibacter subterraneus
      16S Identity %
      81.95439739413682
      POCPu
      6.3150340868317185
      G+C Difference (%)
      12.560000000000002
      0 references
      Desulfuromonas acetoxidans
      16S Identity %
      81.93632228719949
      POCPu
      5.745630345853478
      G+C Difference (%)
      7.710000000000001
      0 references
      Seleniibacterium seleniigenes
      16S Identity %
      81.66325835037492
      0 references
      Streptomyces lunaelactis
      16S Identity %
      81.3953488372093
      POCPu
      1.7690013370358941
      G+C Difference (%)
      25.630000000000003
      0 references
      Streptomyces rhizoryzae
      16S Identity %
      81.3953488372093
      POCPu
      1.8477043673012319
      G+C Difference (%)
      29.67000000000001
      0 references
      Streptomyces turgidiscabies
      16S Identity %
      81.32890365448505
      POCPu
      1.4215514215514216
      G+C Difference (%)
      25.82
      0 references
      Streptomyces paludis
      16S Identity %
      81.32890365448505
      POCPu
      1.770008795074758
      G+C Difference (%)
      27.07
      0 references
      Streptomyces griseocarneus
      16S Identity %
      81.30841121495327
      POCPu
      2.006298845211711
      G+C Difference (%)
      28.07
      0 references
      Desulfuromonas carbonis
      16S Identity %
      81.2992125984252
      0 references
      Streptomyces durbertensis
      16S Identity %
      81.27914723517655
      POCPu
      2.0627062706270625
      G+C Difference (%)
      28.300000000000004
      0 references
      Streptomyces alkaliterrae
      16S Identity %
      81.22096881220969
      POCPu
      2.0960936436640805
      G+C Difference (%)
      27.85
      0 references
      Geomonas bemidjiensis
      16S Identity %
      81.20104438642298
      0 references
      Geomonas limicola
      16S Identity %
      81.11739745403112
      POCPu
      5.691564010603462
      G+C Difference (%)
      17.700000000000003
      0 references
      Streptomyces zagrosensis
      16S Identity %
      81.06111484217595
      POCPu
      1.6442451420029895
      G+C Difference (%)
      25.1
      0 references
      Streptomyces benahoarensis
      16S Identity %
      81.02189781021897
      POCPu
      2.0539470428111852
      G+C Difference (%)
      28.04
      0 references
      Geotalea uraniireducens
      16S Identity %
      80.98039215686275
      POCPu
      6.3407181054239885
      G+C Difference (%)
      10.120000000000005
      0 references
      Streptomyces inhibens
      16S Identity %
      80.93333333333334
      POCPu
      1.6841706878607248
      G+C Difference (%)
      26.339999999999996
      0 references
      Streptomyces youssoufiensis
      16S Identity %
      80.920613742495
      POCPu
      1.7841506129597198
      G+C Difference (%)
      29.050000000000004
      0 references
      Streptomyces lydicamycinicus
      16S Identity %
      80.90185676392572
      POCPu
      1.753436519103799
      G+C Difference (%)
      26.979999999999997
      0 references
      Streptomyces roseifaciens
      16S Identity %
      80.90114324142569
      POCPu
      1.767008782139456
      G+C Difference (%)
      28.009999999999998
      0 references
      Streptomyces luteireticuli
      16S Identity %
      80.87649402390437
      POCPu
      1.7849223946784922
      G+C Difference (%)
      27.990000000000002
      0 references
      Streptomyces mashuensis
      16S Identity %
      80.86666666666666
      POCPu
      1.910152104704634
      G+C Difference (%)
      28.880000000000003
      0 references
      Geobacter benzoatilyticus
      16S Identity %
      80.78688524590164
      POCPu
      7.254864915926696
      G+C Difference (%)
      13.520000000000003
      0 references
      Lujinxingia vulgaris
      16S Identity %
      80.70291777188329
      POCPu
      3.240440699935191
      G+C Difference (%)
      20.470000000000006
      0 references
      Desulfobotulus pelophilus
      16S Identity %
      80.69599474720945
      POCPu
      4.477611940298507
      G+C Difference (%)
      7.020000000000003
      0 references
      Desulfobotulus sapovorans
      16S Identity %
      80.6892067620286
      0 references
      Solirubrobacter taibaiensis
      16S Identity %
      80.67104303428154
      POCPu
      1.8156866884830571
      G+C Difference (%)
      24.500000000000007
      0 references
      Geobacter soli
      16S Identity %
      80.62792251169004
      0 references
      Lujinxingia sediminis
      16S Identity %
      80.59602649006624
      POCPu
      3.233789803662762
      G+C Difference (%)
      19.480000000000004
      0 references
      Streptomyces genisteinicus
      16S Identity %
      80.53156146179403
      POCPu
      1.8783644485167794
      G+C Difference (%)
      29.31000000000001
      0 references
      Desulfuromonas chloroethenica
      16S Identity %
      80.5256064690027
      0 references
      Desulfobotulus alkaliphilus
      16S Identity %
      80.4647785039942
      POCPu
      4.623955431754875
      G+C Difference (%)
      6.660000000000004
      0 references
      Syntrophobacterium sulfatireducens
      16S Identity %
      80.41639557579701
      0 references
      Deferrivibrio essentukiensis
      16S Identity %
      80.40629095674967
      POCPu
      6.621431913897988
      G+C Difference (%)
      10.079999999999998
      0 references
      Desulfocella halophila
      16S Identity %
      80.33964728935337
      0 references
      Desulfobotulus mexicanus
      16S Identity %
      80.28909329829173
      POCPu
      4.636756147925661
      G+C Difference (%)
      4.859999999999999
      0 references
      Pelobacter propionicus
      16S Identity %
      80.16960208741031
      POCPu
      5.923884966419838
      G+C Difference (%)
      14.36
      0 references
      Desulfosoma caldarium
      16S Identity %
      80.16472203157173
      POCPu
      6.930886372510738
      G+C Difference (%)
      12.720000000000006
      0 references
      Geobacter anodireducens
      16S Identity %
      80.15320334261838
      POCPu
      7.310199048793377
      G+C Difference (%)
      17.35
      0 references
      Rhodothermus profundi
      16S Identity %
      79.97320830542532
      POCPu
      6.731998295696634
      G+C Difference (%)
      14.840000000000003
      0 references
      Trichlorobacter lovleyi
      16S Identity %
      79.36197916666666
      POCPu
      6.178890250306319
      G+C Difference (%)
      10.620000000000005
      0 references
      Atribacter laminatus
      16S Identity %
      79.01554404145078
      POCPu
      5.866274179983179
      G+C Difference (%)
      5.43
      0 references
      Pelobacter seleniigenes
      POCPu
      5.283485246408157
      G+C Difference (%)
      10.07
      0 references
      Citrifermentans bemidjiense
      POCPu
      6.431776632873524
      G+C Difference (%)
      16.150000000000006
      0 references
      Carbon source
      starch
      0 references
      CAZyme
      GH13
      Occurance
      1
      0 references
      GH6
      Occurance
      1
      0 references
      GH57
      Occurance
      3
      0 references
      GH23
      Occurance
      2
      0 references
      GH28
      Occurance
      1
      0 references
      GH0
      Occurance
      3
      0 references
      GH101
      Occurance
      2
      0 references
      GH109
      Occurance
      1
      0 references
      GH3
      Occurance
      1
      0 references
      GH19
      Occurance
      1
      0 references
      GH105
      Occurance
      1
      0 references
      GT13
      Occurance
      1
      0 references
      GT4
      Occurance
      18
      0 references
      GT22
      Occurance
      1
      0 references
      GT20
      Occurance
      1
      0 references
      GT1
      Occurance
      1
      0 references
      GT5
      Occurance
      1
      0 references
      GT51
      Occurance
      3
      0 references
      GT28
      Occurance
      4
      0 references
      GT30
      Occurance
      2
      0 references
      GT81
      Occurance
      2
      0 references
      GT0
      Occurance
      4
      0 references
      GT2
      Occurance
      8
      0 references
      GT19
      Occurance
      1
      0 references
      GT9
      Occurance
      5
      0 references
      GT55
      Occurance
      1
      0 references
      PL12
      Occurance
      1
      0 references
      CE1
      Occurance
      1
      0 references
      CE11
      Occurance
      4
      0 references
      CE4
      Occurance
      1
      0 references
      CE14
      Occurance
      1
      0 references
      CBM50
      Occurance
      7
      0 references
      CBM13
      Occurance
      3
      0 references
      CBM32
      Occurance
      3
      0 references
      CBM9
      Occurance
      1
      0 references
      CBM6
      Occurance
      1
      0 references
      CBM20
      Occurance
      1
      0 references
      CBM5
      Occurance
      1
      0 references
      CBM48
      Occurance
      1
      0 references
      CBM51
      Occurance
      1
      0 references
      CBM2
      Occurance
      1
      0 references
      Pathway
      MAGs
      no MAG matches found
      0 references
       
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