GCA_014729505.1 (Q85017): Difference between revisions
Appearance
Added qualifier: G+C Difference (%) (P22): 10.880000000000003 |
Created claim: MAGs (P28): no MAG matches found (Q42716) |
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobacterium flexile / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobacterium flexile / qualifier | |||||||
16S Identity %: 23.382045929018787
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanomethylovorans hollandica / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanomethylovorans hollandica / qualifier | |||||||
16S Identity %: 23.358673116793366
| |||||||
| Property / Comparison to close relatives: Methanomethylovorans hollandica / qualifier | |||||||
POCPu: 2.592301649646504
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| Property / Comparison to close relatives: Methanomethylovorans hollandica / qualifier | |||||||
G+C Difference (%): 1.9000000000000057
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanothermus sociabilis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanothermus sociabilis / qualifier | |||||||
16S Identity %: 23.292349726775956
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanolobus sediminis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanolobus sediminis / qualifier | |||||||
16S Identity %: 23.281143635125936
| |||||||
| Property / Comparison to close relatives: Methanolobus sediminis / qualifier | |||||||
POCPu: 2.402479979333506
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| Property / Comparison to close relatives: Methanolobus sediminis / qualifier | |||||||
G+C Difference (%): 2.8300000000000054
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanofervidicoccus abyssi / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanofervidicoccus abyssi / qualifier | |||||||
16S Identity %: 23.26530612244898
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| Property / Comparison to close relatives: Methanofervidicoccus abyssi / qualifier | |||||||
POCPu: 3.4850348503485034
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| Property / Comparison to close relatives: Methanofervidicoccus abyssi / qualifier | |||||||
G+C Difference (%): 8.520000000000003
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Natronomonas pharaonis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Natronomonas pharaonis / qualifier | |||||||
16S Identity %: 23.214285714285715
| |||||||
| Property / Comparison to close relatives: Natronomonas pharaonis / qualifier | |||||||
POCPu: 1.0171173406102705
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| Property / Comparison to close relatives: Natronomonas pharaonis / qualifier | |||||||
G+C Difference (%): 19.349999999999994
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanococcus vannielii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanococcus vannielii / qualifier | |||||||
16S Identity %: 23.034859876965143
| |||||||
| Property / Comparison to close relatives: Methanococcus vannielii / qualifier | |||||||
POCPu: 2.424863387978142
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| Property / Comparison to close relatives: Methanococcus vannielii / qualifier | |||||||
G+C Difference (%): 12.440000000000005
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanocaldococcus villosus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanocaldococcus villosus / qualifier | |||||||
16S Identity %: 22.992450240219632
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| Property / Comparison to close relatives: Methanocaldococcus villosus / qualifier | |||||||
POCPu: 3.28125
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| Property / Comparison to close relatives: Methanocaldococcus villosus / qualifier | |||||||
G+C Difference (%): 14.270000000000003
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermoplasma volcanium / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermoplasma volcanium / qualifier | |||||||
16S Identity %: 22.919508867667123
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| Property / Comparison to close relatives: Thermoplasma volcanium / qualifier | |||||||
POCPu: 1.3120567375886525
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| Property / Comparison to close relatives: Thermoplasma volcanium / qualifier | |||||||
G+C Difference (%): 3.8500000000000014
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobacterium beijingense / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobacterium beijingense / qualifier | |||||||
16S Identity %: 22.859164897381458
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanocaldococcus infernus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanocaldococcus infernus / qualifier | |||||||
16S Identity %: 22.83571915473756
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| Property / Comparison to close relatives: Methanocaldococcus infernus / qualifier | |||||||
POCPu: 3.087349397590361
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| Property / Comparison to close relatives: Methanocaldococcus infernus / qualifier | |||||||
G+C Difference (%): 10.150000000000006
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobacterium movens / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobacterium movens / qualifier | |||||||
16S Identity %: 22.809457579972182
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Palaeococcus helgesonii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Palaeococcus helgesonii / qualifier | |||||||
16S Identity %: 22.80334728033473
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanococcus aeolicus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanococcus aeolicus / qualifier | |||||||
16S Identity %: 22.79863481228669
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| Property / Comparison to close relatives: Methanococcus aeolicus / qualifier | |||||||
POCPu: 1.994828223125231
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| Property / Comparison to close relatives: Methanococcus aeolicus / qualifier | |||||||
G+C Difference (%): 13.730000000000004
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobacterium arcticum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobacterium arcticum / qualifier | |||||||
16S Identity %: 22.473498233215548
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobacterium ferruginis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobacterium ferruginis / qualifier | |||||||
16S Identity %: 21.81947405828003
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| Property / Comparison to close relatives: Methanobacterium ferruginis / qualifier | |||||||
POCPu: 1.8721128130318503
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| Property / Comparison to close relatives: Methanobacterium ferruginis / qualifier | |||||||
G+C Difference (%): 6.380000000000003
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanocaldococcus indicus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanocaldococcus indicus / qualifier | |||||||
16S Identity %: 21.19487908961593
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methermicoccus shengliensis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methermicoccus shengliensis / qualifier | |||||||
16S Identity %: 20.671641791044777
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| Property / Comparison to close relatives: Methermicoccus shengliensis / qualifier | |||||||
POCPu: 2.614613180515759
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| Property / Comparison to close relatives: Methermicoccus shengliensis / qualifier | |||||||
G+C Difference (%): 10.799999999999997
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| Property / Carbon source | |||||||
| Property / Carbon source: starch / rank | |||||||
Normal rank | |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH28 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH28 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GH57 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH57 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GH3 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH3 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GH0 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH0 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH43 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH43 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT3 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT3 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT4 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT4 / qualifier | |||||||
Occurance: 5
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| Property / CAZyme | |||||||
| Property / CAZyme: GT35 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT35 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT2 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT2 / qualifier | |||||||
Occurance: 4
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CE14 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CE14 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: CBM50 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM50 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM51 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM51 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: CBM48 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM48 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / Pathway | |||||||
| Property / Pathway: Glycolysis, core module involving three-carbon compounds / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Glycolysis, core module involving three-carbon compounds / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Phosphatidylcholine (PC) biosynthesis, PE => PC / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Phosphatidylcholine (PC) biosynthesis, PE => PC / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc / rank | |||||||
Normal rank | |||||||
| Property / Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Lactate production / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Lactate production / qualifier | |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: insect gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: mouse gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human vaginal metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: freshwater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: coral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: coral metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: coral metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: pig gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: chicken gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: marine metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: marine metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: plant metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: plant metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: plant metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: soil metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: soil metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: soil metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human oral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: activated sludge metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: wastewater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: rhizosphere metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: marine sediment metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human lung metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: bovine gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human skin metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / MAGs | |||||||
| Property / MAGs: no MAG matches found / rank | |||||||
Normal rank | |||||||
Latest revision as of 08:34, 10 August 2026
genome assembly
| Language | Label | Description | Also known as |
|---|---|---|---|
| default for all languages | No label defined |
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| English | GCA_014729505.1 |
genome assembly |
Statements
no current description - please contribute here
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