GCA_001281695.1 (Q45058): Difference between revisions
Added qualifier: POCPu (P4): 17.7196261682243 |
Created claim: MAGs (P28): no MAG matches found (Q42716) |
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| (363 intermediate revisions by the same user not shown) | |||||||
| Property / Comparison to close relatives: Leadbetterella byssophila / qualifier | |||||||
G+C Difference (%): 7.789999999999999
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Algoriphagus locisalis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Algoriphagus locisalis / qualifier | |||||||
16S Identity %: 24.642614023144997
| |||||||
| Property / Comparison to close relatives: Algoriphagus locisalis / qualifier | |||||||
POCPu: 17.060569418489614
| |||||||
| Property / Comparison to close relatives: Algoriphagus locisalis / qualifier | |||||||
G+C Difference (%): 8.550000000000004
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Roseivirga seohaensis subsp. aquiponti / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Roseivirga seohaensis subsp. aquiponti / qualifier | |||||||
16S Identity %: 24.53333333333333
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Algoriphagus antarcticus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Algoriphagus antarcticus / qualifier | |||||||
16S Identity %: 24.505119453924916
| |||||||
| Property / Comparison to close relatives: Algoriphagus antarcticus / qualifier | |||||||
POCPu: 16.684299619128225
| |||||||
| Property / Comparison to close relatives: Algoriphagus antarcticus / qualifier | |||||||
G+C Difference (%): 7.75
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Algoriphagus aquimarinus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Algoriphagus aquimarinus / qualifier | |||||||
16S Identity %: 24.505119453924916
| |||||||
| Property / Comparison to close relatives: Algoriphagus aquimarinus / qualifier | |||||||
POCPu: 17.788956213558933
| |||||||
| Property / Comparison to close relatives: Algoriphagus aquimarinus / qualifier | |||||||
G+C Difference (%): 7.609999999999999
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Flectobacillus major / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Flectobacillus major / qualifier | |||||||
16S Identity %: 24.41156691324815
| |||||||
| Property / Comparison to close relatives: Flectobacillus major / qualifier | |||||||
POCPu: 20.52902120368387
| |||||||
| Property / Comparison to close relatives: Flectobacillus major / qualifier | |||||||
G+C Difference (%): 5.150000000000006
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Algoriphagus yeomjeoni / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Algoriphagus yeomjeoni / qualifier | |||||||
16S Identity %: 24.38692098092643
| |||||||
| Property / Comparison to close relatives: Algoriphagus yeomjeoni / qualifier | |||||||
POCPu: 17.967753160886208
| |||||||
| Property / Comparison to close relatives: Algoriphagus yeomjeoni / qualifier | |||||||
G+C Difference (%): 7.609999999999999
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Algoriphagus resistens / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Algoriphagus resistens / qualifier | |||||||
16S Identity %: 24.357239512855212
| |||||||
| Property / Comparison to close relatives: Algoriphagus resistens / qualifier | |||||||
POCPu: 16.50171892905511
| |||||||
| Property / Comparison to close relatives: Algoriphagus resistens / qualifier | |||||||
G+C Difference (%): 9.32
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Adhaeribacter arboris / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Adhaeribacter arboris / qualifier | |||||||
16S Identity %: 24.348422496570645
| |||||||
| Property / Comparison to close relatives: Adhaeribacter arboris / qualifier | |||||||
POCPu: 17.769595969382813
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| Property / Comparison to close relatives: Adhaeribacter arboris / qualifier | |||||||
G+C Difference (%): 9.370000000000005
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Algoriphagus pacificus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Algoriphagus pacificus / qualifier | |||||||
16S Identity %: 24.28958051420839
| |||||||
| Property / Comparison to close relatives: Algoriphagus pacificus / qualifier | |||||||
POCPu: 17.851500789889414
| |||||||
| Property / Comparison to close relatives: Algoriphagus pacificus / qualifier | |||||||
G+C Difference (%): 6.480000000000004
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Fulvivirga marina / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Fulvivirga marina / qualifier | |||||||
16S Identity %: 24.286662242866623
| |||||||
| Property / Comparison to close relatives: Fulvivirga marina / qualifier | |||||||
POCPu: 19.168356997971603
| |||||||
| Property / Comparison to close relatives: Fulvivirga marina / qualifier | |||||||
G+C Difference (%): 7.270000000000003
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Roseivirga seohaensis subsp. seohaensis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Roseivirga seohaensis subsp. seohaensis / qualifier | |||||||
16S Identity %: 24.267211997273346
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Emticicia ginsengisoli / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Emticicia ginsengisoli / qualifier | |||||||
16S Identity %: 24.246575342465754
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Nitritalea halalkaliphila / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Nitritalea halalkaliphila / qualifier | |||||||
16S Identity %: 24.161073825503358
| |||||||
| Property / Comparison to close relatives: Nitritalea halalkaliphila / qualifier | |||||||
POCPu: 18.905589478628464
| |||||||
| Property / Comparison to close relatives: Nitritalea halalkaliphila / qualifier | |||||||
G+C Difference (%): 15.96
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Algoriphagus lutimaris / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Algoriphagus lutimaris / qualifier | |||||||
16S Identity %: 24.098025867937373
| |||||||
| Property / Comparison to close relatives: Algoriphagus lutimaris / qualifier | |||||||
POCPu: 18.788389738648682
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| Property / Comparison to close relatives: Algoriphagus lutimaris / qualifier | |||||||
G+C Difference (%): 6.060000000000002
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Shiella aurantiaca / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Shiella aurantiaca / qualifier | |||||||
16S Identity %: 24.05149051490515
| |||||||
| Property / Comparison to close relatives: Shiella aurantiaca / qualifier | |||||||
POCPu: 23.351969834871927
| |||||||
| Property / Comparison to close relatives: Shiella aurantiaca / qualifier | |||||||
G+C Difference (%): 11.190000000000005
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Emticicia fluvialis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Emticicia fluvialis / qualifier | |||||||
16S Identity %: 23.89853137516689
| |||||||
| Property / Comparison to close relatives: Emticicia fluvialis / qualifier | |||||||
POCPu: 20.53612517257248
| |||||||
| Property / Comparison to close relatives: Emticicia fluvialis / qualifier | |||||||
G+C Difference (%): 9.300000000000004
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermoflexibacter ruber / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermoflexibacter ruber / qualifier | |||||||
16S Identity %: 23.850766155896068
| |||||||
| Property / Comparison to close relatives: Thermoflexibacter ruber / qualifier | |||||||
POCPu: 22.280086040982678
| |||||||
| Property / Comparison to close relatives: Thermoflexibacter ruber / qualifier | |||||||
G+C Difference (%): 5
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Belliella baltica / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Belliella baltica / qualifier | |||||||
16S Identity %: 23.81615598885794
| |||||||
| Property / Comparison to close relatives: Belliella baltica / qualifier | |||||||
POCPu: 19.446476469153865
| |||||||
| Property / Comparison to close relatives: Belliella baltica / qualifier | |||||||
G+C Difference (%): 4.190000000000005
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Emticicia oligotrophica / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Emticicia oligotrophica / qualifier | |||||||
16S Identity %: 23.67182246133154
| |||||||
| Property / Comparison to close relatives: Emticicia oligotrophica / qualifier | |||||||
POCPu: 20.980550120842445
| |||||||
| Property / Comparison to close relatives: Emticicia oligotrophica / qualifier | |||||||
G+C Difference (%): 2.960000000000001
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Flectobacillus pallidus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Flectobacillus pallidus / qualifier | |||||||
16S Identity %: 23.60912981455064
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Arcicella aquatica / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Arcicella aquatica / qualifier | |||||||
16S Identity %: 23.56164383561644
| |||||||
| Property / Comparison to close relatives: Arcicella aquatica / qualifier | |||||||
POCPu: 20.403825717321997
| |||||||
| Property / Comparison to close relatives: Arcicella aquatica / qualifier | |||||||
G+C Difference (%): 2.8200000000000003
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Rhodocytophaga aerolata / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Rhodocytophaga aerolata / qualifier | |||||||
16S Identity %: 23.30508474576271
| |||||||
| Property / Comparison to close relatives: Rhodocytophaga aerolata / qualifier | |||||||
POCPu: 18.80370125578321
| |||||||
| Property / Comparison to close relatives: Rhodocytophaga aerolata / qualifier | |||||||
G+C Difference (%): 8.800000000000004
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Roseivirga seohaensis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Roseivirga seohaensis / qualifier | |||||||
POCPu: 21.117166212534062
| |||||||
| Property / Comparison to close relatives: Roseivirga seohaensis / qualifier | |||||||
G+C Difference (%): 6.68
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH13 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH13 / qualifier | |||||||
Occurance: 3
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH0 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH0 / qualifier | |||||||
Occurance: 13
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH35 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH35 / qualifier | |||||||
Occurance: 2
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH19 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH19 / qualifier | |||||||
Occurance: 5
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH3 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH3 / qualifier | |||||||
Occurance: 2
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH6 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH6 / qualifier | |||||||
Occurance: 2
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH65 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH65 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH28 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH28 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH18 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH18 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH97 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH97 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH101 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH101 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH23 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH23 / qualifier | |||||||
Occurance: 4
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH5 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH5 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH16 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH16 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH114 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH114 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH130 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH130 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH109 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH109 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH152 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH152 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH43 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH43 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH25 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH25 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT13 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT13 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT51 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT51 / qualifier | |||||||
Occurance: 2
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT4 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT4 / qualifier | |||||||
Occurance: 32
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT83 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT83 / qualifier | |||||||
Occurance: 2
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT2 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT2 / qualifier | |||||||
Occurance: 31
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT7 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT7 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT26 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT26 / qualifier | |||||||
Occurance: 3
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT28 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT28 / qualifier | |||||||
Occurance: 3
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT32 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT32 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT30 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT30 / qualifier | |||||||
Occurance: 2
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT19 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT19 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT1 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT1 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT0 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT0 / qualifier | |||||||
Occurance: 7
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT9 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT9 / qualifier | |||||||
Occurance: 4
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT17 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT17 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT5 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT5 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CE3 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CE3 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CE11 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CE11 / qualifier | |||||||
Occurance: 4
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CE4 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CE4 / qualifier | |||||||
Occurance: 4
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CE12 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CE12 / qualifier | |||||||
Occurance: 3
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CE14 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CE14 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM6 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM6 / qualifier | |||||||
Occurance: 4
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM12 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM12 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM5 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM5 / qualifier | |||||||
Occurance: 3
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM50 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM50 / qualifier | |||||||
Occurance: 20
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM13 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM13 / qualifier | |||||||
Occurance: 9
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM9 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM9 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM48 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM48 / qualifier | |||||||
Occurance: 10
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM20 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM20 / qualifier | |||||||
Occurance: 4
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM51 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM51 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / Pathway | |||||||
| Property / Pathway: Glycolysis, core module involving three-carbon compounds / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Glycolysis, core module involving three-carbon compounds / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Gluconeogenesis, oxaloacetate => fructose-6P / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Gluconeogenesis, oxaloacetate => fructose-6P / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / rank | |||||||
Normal rank | |||||||
| Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Cysteine biosynthesis, serine => cysteine / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Cysteine biosynthesis, serine => cysteine / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Ornithine biosynthesis, glutamate => ornithine / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Ornithine biosynthesis, glutamate => ornithine / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Methionine degradation / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Methionine degradation / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Tyrosine biosynthesis, chorismate => arogenate => tyrosine / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Tyrosine biosynthesis, chorismate => arogenate => tyrosine / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Adenine ribonucleotide biosynthesis, IMP => ADP, ATP / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Adenine ribonucleotide biosynthesis, IMP => ADP, ATP / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Guanine ribonucleotide biosynthesis, IMP => GDP, GTP / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Guanine ribonucleotide biosynthesis, IMP => GDP, GTP / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: beta-Oxidation, acyl-CoA synthesis / rank | |||||||
Normal rank | |||||||
| Property / Pathway: beta-Oxidation, acyl-CoA synthesis / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Triacylglycerol biosynthesis / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Triacylglycerol biosynthesis / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Lycopene biosynthesis, geranylgeranyl-PP => lycopene / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Lycopene biosynthesis, geranylgeranyl-PP => lycopene / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Acylglycerol degradation / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Acylglycerol degradation / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Coenzyme A biosynthesis, pantothenate => CoA / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Coenzyme A biosynthesis, pantothenate => CoA / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Heme biosynthesis, plants and bacteria, glutamate => heme / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Heme biosynthesis, plants and bacteria, glutamate => heme / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Cobalamin biosynthesis, cobyrinate a, c-diamide => cobalamin / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Cobalamin biosynthesis, cobyrinate a, c-diamide => cobalamin / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Polyamine biosynthesis, arginine => ornithine => putrescine / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Polyamine biosynthesis, arginine => ornithine => putrescine / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Cytochrome c oxidase, cbb3-type / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Cytochrome c oxidase, cbb3-type / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Cysteine biosynthesis, homocysteine + serine => cysteine / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Cysteine biosynthesis, homocysteine + serine => cysteine / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc / rank | |||||||
Normal rank | |||||||
| Property / Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Glycine cleavage system / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Glycine cleavage system / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Proline degradation, proline => glutamate / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Proline degradation, proline => glutamate / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Proline metabolism / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Proline metabolism / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man / rank | |||||||
Normal rank | |||||||
| Property / Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: GDP-L-Fuc biosynthesis, GDP-Man => GDP-L-Fuc / rank | |||||||
Normal rank | |||||||
| Property / Pathway: GDP-L-Fuc biosynthesis, GDP-Man => GDP-L-Fuc / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: UDP-GalNAcA biosynthesis, UDP-GlcNAc => UDP-GalNAcA / rank | |||||||
Normal rank | |||||||
| Property / Pathway: UDP-GalNAcA biosynthesis, UDP-GlcNAc => UDP-GalNAcA / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Zeaxanthin biosynthesis, lycopene => beta-carotene => zeaxanthin / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Zeaxanthin biosynthesis, lycopene => beta-carotene => zeaxanthin / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Histidine degradation, histidine => N-formiminoglutamate => glutamate / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Histidine degradation, histidine => N-formiminoglutamate => glutamate / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: De novo purine biosynthesis, PRPP + glutamine => IMP / rank | |||||||
Normal rank | |||||||
| Property / Pathway: De novo purine biosynthesis, PRPP + glutamine => IMP / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Fatty acid biosynthesis, initiation / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Fatty acid biosynthesis, initiation / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Fatty acid biosynthesis, elongation / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Fatty acid biosynthesis, elongation / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Tetrahydrofolate biosynthesis, GTP => THF / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Tetrahydrofolate biosynthesis, GTP => THF / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Mannose degradation / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Mannose degradation / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Aspartate degradation I / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Aspartate degradation I / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Alanine degradation II / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Alanine degradation II / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Glycine degradation / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Glycine degradation / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Isoleucine degradation / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Isoleucine degradation / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Leucine degradation / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Leucine degradation / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Methionine degradation I / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Methionine degradation I / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Proline degradation / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Proline degradation / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Cysteine biosynthesis/homocysteine degradation / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Cysteine biosynthesis/homocysteine degradation / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Cysteine degradation I / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Cysteine degradation I / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Serine degradation / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Serine degradation / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Threonine degradation II / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Threonine degradation II / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Arginine degradation IV / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Arginine degradation IV / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Histidine degradation / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Histidine degradation / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Pentose phosphate pathway (non-oxidative branch) / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Pentose phosphate pathway (non-oxidative branch) / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Acetate to acetyl-CoA / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Acetate to acetyl-CoA / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Acetyl-CoA to acetate / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Acetyl-CoA to acetate / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Acetyl-CoA to crotonyl-CoA / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Acetyl-CoA to crotonyl-CoA / qualifier | |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: insect gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Prevalence (%): 0.1
| |||||||
| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: mouse gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human vaginal metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: freshwater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Prevalence (%): 2.6
| |||||||
| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: coral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: coral metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: coral metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: pig gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: chicken gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: marine metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: marine metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: plant metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: plant metagenome / qualifier | |||||||
Prevalence (%): 0.9
| |||||||
| Property / Ecosystem: plant metagenome / qualifier | |||||||
Relative abundance (%): 0.02
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: soil metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: soil metagenome / qualifier | |||||||
Prevalence (%): 0.2
| |||||||
| Property / Ecosystem: soil metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human oral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: activated sludge metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Prevalence (%): 1.4
| |||||||
| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Relative abundance (%): 0.01
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: wastewater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Prevalence (%): 0.2
| |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: rhizosphere metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Prevalence (%): 0.2
| |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Relative abundance (%): 0.01
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: marine sediment metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human lung metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: bovine gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human skin metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Prevalence (%): 0.2
| |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Relative abundance (%): 0.01
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / MAGs | |||||||
| Property / MAGs: no MAG matches found / rank | |||||||
Normal rank | |||||||
Latest revision as of 17:25, 21 July 2026
genome assembly
| Language | Label | Description | Also known as |
|---|---|---|---|
| default for all languages | No label defined |
||
| English | GCA_001281695.1 |
genome assembly |
Statements
no current description - please contribute here
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