Jump to content

GCA_001180285.1 (Q44962): Difference between revisions

Add links
From wikibase
← Older edit
Admin (talk | contribs)
Bots, Bureaucrats, Interface administrators, Administrators
1,124,913 edits
‎Added qualifier: Prevalence (%) (P18): 0
 
(40 intermediate revisions by the same user not shown)
Property / Ecosystem: pig gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: chicken gut metagenome / rank
 
Normal rank
Property / Ecosystem: chicken gut metagenome / qualifier
 
Prevalence (%): 0.4
Amount0.4
Unit1
Property / Ecosystem: chicken gut metagenome / qualifier
 
Relative abundance (%): 0.02
Amount0.02
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine metagenome / rank
 
Normal rank
Property / Ecosystem: marine metagenome / qualifier
 
Prevalence (%): 30.2
Amount30.2
Unit1
Property / Ecosystem: marine metagenome / qualifier
 
Relative abundance (%): 6.55
Amount6.55
Unit1
Property / Ecosystem
 
Property / Ecosystem: plant metagenome / rank
 
Normal rank
Property / Ecosystem: plant metagenome / qualifier
 
Prevalence (%): 0.5
Amount0.5
Unit1
Property / Ecosystem: plant metagenome / qualifier
 
Relative abundance (%): 0.24
Amount0.24
Unit1
Property / Ecosystem
 
Property / Ecosystem: soil metagenome / rank
 
Normal rank
Property / Ecosystem: soil metagenome / qualifier
 
Prevalence (%): 1
Amount1
Unit1
Property / Ecosystem: soil metagenome / qualifier
 
Relative abundance (%): 0.02
Amount0.02
Unit1
Property / Ecosystem
 
Property / Ecosystem: human oral metagenome / rank
 
Normal rank
Property / Ecosystem: human oral metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human oral metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: activated sludge metagenome / rank
 
Normal rank
Property / Ecosystem: activated sludge metagenome / qualifier
 
Prevalence (%): 1
Amount1
Unit1
Property / Ecosystem: activated sludge metagenome / qualifier
 
Relative abundance (%): 0.07
Amount0.07
Unit1
Property / Ecosystem
 
Property / Ecosystem: wastewater metagenome / rank
 
Normal rank
Property / Ecosystem: wastewater metagenome / qualifier
 
Prevalence (%): 1
Amount1
Unit1
Property / Ecosystem: wastewater metagenome / qualifier
 
Relative abundance (%): 0.02
Amount0.02
Unit1
Property / Ecosystem
 
Property / Ecosystem: rhizosphere metagenome / rank
 
Normal rank
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Prevalence (%): 0.3
Amount0.3
Unit1
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine sediment metagenome / rank
 
Normal rank
Property / Ecosystem: marine sediment metagenome / qualifier
 
Prevalence (%): 8.9
Amount8.9
Unit1
Property / Ecosystem: marine sediment metagenome / qualifier
 
Relative abundance (%): 1.04
Amount1.04
Unit1
Property / Ecosystem
 
Property / Ecosystem: human lung metagenome / rank
 
Normal rank
Property / Ecosystem: human lung metagenome / qualifier
 
Prevalence (%): 0.4
Amount0.4
Unit1
Property / Ecosystem: human lung metagenome / qualifier
 
Relative abundance (%): 0.02
Amount0.02
Unit1
Property / Ecosystem
 
Property / Ecosystem: bovine gut metagenome / rank
 
Normal rank
Property / Ecosystem: bovine gut metagenome / qualifier
 
Prevalence (%): 0.2
Amount0.2
Unit1
Property / Ecosystem: bovine gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human skin metagenome / rank
 
Normal rank
Property / Ecosystem: human skin metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human skin metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human gut metagenome / rank
 
Normal rank
Property / Ecosystem: human gut metagenome / qualifier
 
Prevalence (%): 0.2
Amount0.2
Unit1
Property / Ecosystem: human gut metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / MAGs
 
Property / MAGs: no MAG matches found / rank
 
Normal rank

Latest revision as of 15:52, 21 July 2026

genome assembly
Language Label Description Also known as
default for all languages
No label defined
    English
    GCA_001180285.1
    genome assembly

      Statements

      Protologue of the species
      no current description - please contribute here
      0 references
      Comparison to close relatives
      Prochlorothrix hollandica
      16S Identity %
      90.10238907849829
      POCPu
      12.278081964493115
      G+C Difference (%)
      22.849999999999998
      0 references
      Alkalinema pantanalense
      16S Identity %
      89.47006194081212
      0 references
      Pantanalinema rosaneae
      16S Identity %
      88.78183069511356
      0 references
      Rubidibacter lacunae
      16S Identity %
      88.55243722304283
      POCPu
      14.020170061301165
      G+C Difference (%)
      24.88
      0 references
      Romeriopsis marina
      16S Identity %
      88.49122807017544
      0 references
      Fortiea necridiiformans
      16S Identity %
      88.35149863760218
      0 references
      Romeriopsis navalis
      16S Identity %
      88.2554945054945
      0 references
      Iphinoe spelaeobios
      16S Identity %
      88.14968814968816
      0 references
      Kryptousia macronema
      16S Identity %
      88.04945054945054
      0 references
      Amazonocrinis nigriterrae
      16S Identity %
      88.00813008130082
      0 references
      Foliisarcina bertiogensis
      16S Identity %
      87.9347054648687
      0 references
      Desmonostoc salinum
      16S Identity %
      87.77472527472527
      0 references
      Planktothricoides raciborskii
      16S Identity %
      87.77452415812591
      0 references
      Atlanticothrix silvestris
      16S Identity %
      87.72178850248403
      0 references
      Phyllonema aviceniicola
      16S Identity %
      87.57102272727273
      0 references
      Amazonocrinis malviyae
      16S Identity %
      87.43754461099215
      0 references
      Cephalothrix komarekiana
      16S Identity %
      87.43131868131869
      0 references
      Nostoc neudorfense
      16S Identity %
      87.32106339468302
      0 references
      Gloeomargarita lithophora
      16S Identity %
      87.2542372881356
      0 references
      Aliinostoc morphoplasticum
      16S Identity %
      87.24559023066486
      0 references
      Dendronalium phyllosphericum
      16S Identity %
      87.2159090909091
      0 references
      Halotia longispora
      16S Identity %
      87.19889883000688
      0 references
      Kryptousia microlepis
      16S Identity %
      87.19889883000688
      0 references
      Desikacharya soli
      16S Identity %
      87.12328767123287
      0 references
      Halotia wernerae
      16S Identity %
      87.06125258086718
      0 references
      Cephalothrix lacustris
      16S Identity %
      87.01923076923077
      0 references
      Halotia branconii
      16S Identity %
      86.99242945629732
      0 references
      Halospirulina tapeticola
      16S Identity %
      86.91250903832248
      0 references
      Desikacharya nostocoides
      16S Identity %
      86.73957621326042
      0 references
      Crinalium epipsammum
      16S Identity %
      86.66666666666667
      0 references
      Desikacharya thermotolerans
      16S Identity %
      85.29672276350753
      0 references
      Chalicogloea cavernicola
      16S Identity %
      85.28591352859135
      0 references
      Ancylothrix terrestris
      16S Identity %
      85.16260162601627
      0 references
      Acetonema longum
      16S Identity %
      83.16430020283975
      POCPu
      3.4381858083394294
      G+C Difference (%)
      19.02
      0 references
      Alborzia kermanshahica
      16S Identity %
      82.62490678598061
      0 references
      Laceyella sacchari
      16S Identity %
      82.52089136490251
      POCPu
      4.013663535439795
      G+C Difference (%)
      17.330000000000002
      0 references
      Lihuaxuella thermophila
      16S Identity %
      82.40489130434783
      POCPu
      3.8528557599225555
      G+C Difference (%)
      17.610000000000003
      0 references
      Caldisalinibacter kiritimatiensis
      16S Identity %
      82.14528173794976
      POCPu
      3.546099290780142
      G+C Difference (%)
      1.2199999999999989
      0 references
      Laceyella sediminis
      16S Identity %
      82.13523131672598
      0 references
      Laceyella putida
      16S Identity %
      82.11551844119694
      0 references
      Laceyella tengchongensis
      16S Identity %
      82.09606986899564
      POCPu
      4.018612521150592
      G+C Difference (%)
      17.709999999999997
      0 references
      Novosphingobium hassiacum
      16S Identity %
      81.92934782608695
      POCPu
      2.184813753581662
      G+C Difference (%)
      31.38
      0 references
      Oceanobacillus rekensis
      16S Identity %
      81.89189189189189
      POCPu
      3.237760873805344
      G+C Difference (%)
      6.110000000000003
      0 references
      Desulfovectis peckii
      16S Identity %
      81.70068027210884
      0 references
      Acetivibrio thermocellus
      16S Identity %
      81.34328358208955
      POCPu
      3.406730369754882
      G+C Difference (%)
      7.650000000000002
      0 references
      Heliomicrobium modesticaldum
      16S Identity %
      81.06630211893369
      POCPu
      4.225690276110444
      G+C Difference (%)
      25.639999999999997
      0 references
      Frankia asymbiotica
      16S Identity %
      80.3122878479294
      0 references
      Frankia inefficax
      16S Identity %
      80.20408163265306
      0 references
      Pseudofrankia asymbiotica
      POCPu
      1.411378555798687
      G+C Difference (%)
      40.599999999999994
      0 references
      Pseudofrankia inefficax
      POCPu
      1.557234166182452
      G+C Difference (%)
      40.97
      0 references
      Carbon source
      starch
      0 references
      CAZyme
      GH13
      Occurance
      4
      0 references
      GH6
      Occurance
      2
      0 references
      GH28
      Occurance
      1
      0 references
      GH100
      Occurance
      1
      0 references
      GH19
      Occurance
      2
      0 references
      GH0
      Occurance
      1
      0 references
      GH23
      Occurance
      1
      0 references
      GT13
      Occurance
      1
      0 references
      GT35
      Occurance
      1
      0 references
      GT2
      Occurance
      14
      0 references
      GT4
      Occurance
      9
      0 references
      GT5
      Occurance
      2
      0 references
      GT0
      Occurance
      4
      0 references
      GT30
      Occurance
      1
      0 references
      GT28
      Occurance
      3
      0 references
      GT32
      Occurance
      1
      0 references
      GT11
      Occurance
      1
      0 references
      GT1
      Occurance
      1
      0 references
      GT20
      Occurance
      1
      0 references
      CBM50
      Occurance
      2
      0 references
      CBM48
      Occurance
      2
      0 references
      CBM13
      Occurance
      1
      0 references
      CBM5
      Occurance
      2
      0 references
      Pathway
      Ecosystem
      MAGs
      no MAG matches found
      0 references
       
      Retrieved from "https://taxakg.zbmed.de/w/index.php?title=Item:Q44962&oldid=153852"