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‎Created claim: CAZyme (P23): GT28 (Q42756)
 
(116 intermediate revisions by the same user not shown)
Property / CAZyme: GT28 / qualifier
 
Occurance: 4
Amount4
Unit1
Property / CAZyme
 
Property / CAZyme: GT2 / rank
 
Normal rank
Property / CAZyme: GT2 / qualifier
 
Occurance: 6
Amount6
Unit1
Property / CAZyme
 
Property / CAZyme: GT61 / rank
 
Normal rank
Property / CAZyme: GT61 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT9 / rank
 
Normal rank
Property / CAZyme: GT9 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT17 / rank
 
Normal rank
Property / CAZyme: GT17 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT41 / rank
 
Normal rank
Property / CAZyme: GT41 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT26 / rank
 
Normal rank
Property / CAZyme: GT26 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: PL0 / rank
 
Normal rank
Property / CAZyme: PL0 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: CE11 / rank
 
Normal rank
Property / CAZyme: CE11 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: CBM50 / rank
 
Normal rank
Property / CAZyme: CBM50 / qualifier
 
Occurance: 2
Amount2
Unit1
Property / CAZyme
 
Property / CAZyme: CBM32 / rank
 
Normal rank
Property / CAZyme: CBM32 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: CBM48 / rank
 
Normal rank
Property / CAZyme: CBM48 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / Pathway
 
Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / rank
 
Normal rank
Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / qualifier
 
Property / Pathway
 
Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / rank
 
Normal rank
Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / qualifier
 
Property / Pathway
 
Property / Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate / rank
 
Normal rank
Property / Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate / qualifier
 
Property / Pathway
 
Property / Pathway: Ornithine biosynthesis, glutamate => ornithine / rank
 
Normal rank
Property / Pathway: Ornithine biosynthesis, glutamate => ornithine / qualifier
 
Property / Pathway
 
Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / rank
 
Normal rank
Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / qualifier
 
Property / Pathway
 
Property / Pathway: beta-Oxidation, acyl-CoA synthesis / rank
 
Normal rank
Property / Pathway: beta-Oxidation, acyl-CoA synthesis / qualifier
 
Property / Pathway
 
Property / Pathway: Glutathione biosynthesis, glutamate => glutathione / rank
 
Normal rank
Property / Pathway: Glutathione biosynthesis, glutamate => glutathione / qualifier
 
Property / Pathway
 
Property / Pathway: Coenzyme A biosynthesis, pantothenate => CoA / rank
 
Normal rank
Property / Pathway: Coenzyme A biosynthesis, pantothenate => CoA / qualifier
 
Property / Pathway
 
Property / Pathway: Glycine cleavage system / rank
 
Normal rank
Property / Pathway: Glycine cleavage system / qualifier
 
Property / Pathway
 
Property / Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man / rank
 
Normal rank
Property / Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man / qualifier
 
Property / Pathway
 
Property / Pathway: GDP-L-Fuc biosynthesis, GDP-Man => GDP-L-Fuc / rank
 
Normal rank
Property / Pathway: GDP-L-Fuc biosynthesis, GDP-Man => GDP-L-Fuc / qualifier
 
Property / Pathway
 
Property / Pathway: Zeaxanthin biosynthesis, lycopene => beta-carotene => zeaxanthin / rank
 
Normal rank
Property / Pathway: Zeaxanthin biosynthesis, lycopene => beta-carotene => zeaxanthin / qualifier
 
Property / Pathway
 
Property / Pathway: Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor / rank
 
Normal rank
Property / Pathway: Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor / qualifier
 
Property / Pathway
 
Property / Pathway: Fatty acid biosynthesis, elongation / rank
 
Normal rank
Property / Pathway: Fatty acid biosynthesis, elongation / qualifier
 
Property / Pathway
 
Property / Pathway: Glycine degradation / rank
 
Normal rank
Property / Pathway: Glycine degradation / qualifier
 
Property / Pathway
 
Property / Pathway: Glutamine degradation II / rank
 
Normal rank
Property / Pathway: Glutamine degradation II / qualifier
 
Property / Pathway
 
Property / Pathway: Acetate to acetyl-CoA / rank
 
Normal rank
Property / Pathway: Acetate to acetyl-CoA / qualifier
 
Property / Pathway
 
Property / Pathway: Lactate consumption I / rank
 
Normal rank
Property / Pathway: Lactate consumption I / qualifier
 
Property / Ecosystem
 
Property / Ecosystem: insect gut metagenome / rank
 
Normal rank
Property / Ecosystem: insect gut metagenome / qualifier
 
Prevalence (%): 0.8
Amount0.8
Unit1
Property / Ecosystem: insect gut metagenome / qualifier
 
Relative abundance (%): 0.38
Amount0.38
Unit1
Property / Ecosystem
 
Property / Ecosystem: mouse gut metagenome / rank
 
Normal rank
Property / Ecosystem: mouse gut metagenome / qualifier
 
Prevalence (%): 0.1
Amount0.1
Unit1
Property / Ecosystem: mouse gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human vaginal metagenome / rank
 
Normal rank
Property / Ecosystem: human vaginal metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human vaginal metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: freshwater metagenome / rank
 
Normal rank
Property / Ecosystem: freshwater metagenome / qualifier
 
Prevalence (%): 2.7
Amount2.7
Unit1
Property / Ecosystem: freshwater metagenome / qualifier
 
Relative abundance (%): 0.04
Amount0.04
Unit1
Property / Ecosystem
 
Property / Ecosystem: coral metagenome / rank
 
Normal rank
Property / Ecosystem: coral metagenome / qualifier
 
Prevalence (%): 51.8
Amount51.8
Unit1
Property / Ecosystem: coral metagenome / qualifier
 
Relative abundance (%): 1.67
Amount1.67
Unit1
Property / Ecosystem
 
Property / Ecosystem: pig gut metagenome / rank
 
Normal rank
Property / Ecosystem: pig gut metagenome / qualifier
 
Prevalence (%): 0.2
Amount0.2
Unit1
Property / Ecosystem: pig gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: chicken gut metagenome / rank
 
Normal rank
Property / Ecosystem: chicken gut metagenome / qualifier
 
Prevalence (%): 0.9
Amount0.9
Unit1
Property / Ecosystem: chicken gut metagenome / qualifier
 
Relative abundance (%): 0.02
Amount0.02
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine metagenome / rank
 
Normal rank
Property / Ecosystem: marine metagenome / qualifier
 
Prevalence (%): 59.5
Amount59.5
Unit1
Property / Ecosystem: marine metagenome / qualifier
 
Relative abundance (%): 6.46
Amount6.46
Unit1
Property / Ecosystem
 
Property / Ecosystem: plant metagenome / rank
 
Normal rank
Property / Ecosystem: plant metagenome / qualifier
 
Prevalence (%): 0.7
Amount0.7
Unit1
Property / Ecosystem: plant metagenome / qualifier
 
Relative abundance (%): 0.05
Amount0.05
Unit1
Property / Ecosystem
 
Property / Ecosystem: soil metagenome / rank
 
Normal rank
Property / Ecosystem: soil metagenome / qualifier
 
Prevalence (%): 1.1
Amount1.1
Unit1
Property / Ecosystem: soil metagenome / qualifier
 
Relative abundance (%): 0.07
Amount0.07
Unit1
Property / Ecosystem
 
Property / Ecosystem: human oral metagenome / rank
 
Normal rank
Property / Ecosystem: human oral metagenome / qualifier
 
Prevalence (%): 0.2
Amount0.2
Unit1
Property / Ecosystem: human oral metagenome / qualifier
 
Relative abundance (%): 0.02
Amount0.02
Unit1
Property / Ecosystem
 
Property / Ecosystem: activated sludge metagenome / rank
 
Normal rank
Property / Ecosystem: activated sludge metagenome / qualifier
 
Prevalence (%): 0.7
Amount0.7
Unit1
Property / Ecosystem: activated sludge metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: wastewater metagenome / rank
 
Normal rank
Property / Ecosystem: wastewater metagenome / qualifier
 
Prevalence (%): 6.6
Amount6.6
Unit1
Property / Ecosystem: wastewater metagenome / qualifier
 
Relative abundance (%): 0.26
Amount0.26
Unit1
Property / Ecosystem
 
Property / Ecosystem: rhizosphere metagenome / rank
 
Normal rank
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Prevalence (%): 2.3
Amount2.3
Unit1
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine sediment metagenome / rank
 
Normal rank
Property / Ecosystem: marine sediment metagenome / qualifier
 
Prevalence (%): 9.5
Amount9.5
Unit1
Property / Ecosystem: marine sediment metagenome / qualifier
 
Relative abundance (%): 1.54
Amount1.54
Unit1
Property / Ecosystem
 
Property / Ecosystem: human lung metagenome / rank
 
Normal rank
Property / Ecosystem: human lung metagenome / qualifier
 
Prevalence (%): 0.4
Amount0.4
Unit1
Property / Ecosystem: human lung metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: bovine gut metagenome / rank
 
Normal rank
Property / Ecosystem: bovine gut metagenome / qualifier
 
Prevalence (%): 0.4
Amount0.4
Unit1
Property / Ecosystem: bovine gut metagenome / qualifier
 
Relative abundance (%): 0.04
Amount0.04
Unit1
Property / Ecosystem
 
Property / Ecosystem: human skin metagenome / rank
 
Normal rank
Property / Ecosystem: human skin metagenome / qualifier
 
Prevalence (%): 0.1
Amount0.1
Unit1
Property / Ecosystem: human skin metagenome / qualifier
 
Relative abundance (%): 0.04
Amount0.04
Unit1
Property / Ecosystem
 
Property / Ecosystem: human gut metagenome / rank
 
Normal rank
Property / Ecosystem: human gut metagenome / qualifier
 
Prevalence (%): 0.4
Amount0.4
Unit1
Property / Ecosystem: human gut metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / MAGs
 
Property / MAGs: no MAG matches found / rank
 
Normal rank

Latest revision as of 15:38, 21 July 2026

genome assembly
Language Label Description Also known as
default for all languages
No label defined
    English
    GCA_001179885.1
    genome assembly

      Statements

      Protologue of the species
      no current description - please contribute here
      0 references
      Comparison to close relatives
      Brucella grignonensis
      16S Identity %
      84.10958904109589
      POCPu
      4.980192416525184
      G+C Difference (%)
      25.729999999999997
      0 references
      Shinella zoogloeoides
      16S Identity %
      84.08304498269896
      POCPu
      5.084745762711865
      G+C Difference (%)
      36.010000000000005
      0 references
      Ensifer alkalisoli
      16S Identity %
      83.98091342876619
      0 references
      Mesorhizobium norvegicum
      16S Identity %
      83.9041095890411
      POCPu
      3.6724795010971243
      G+C Difference (%)
      33.989999999999995
      0 references
      Rhizobium beringeri
      16S Identity %
      83.86876281613124
      POCPu
      3.7343358395989976
      G+C Difference (%)
      32.35
      0 references
      Rhizobium favelukesii
      16S Identity %
      83.83977900552486
      POCPu
      3.4478658899060752
      G+C Difference (%)
      31.229999999999997
      0 references
      Rhizobium metallidurans
      16S Identity %
      83.81344307270233
      POCPu
      4.601551480959097
      G+C Difference (%)
      33.879999999999995
      0 references
      Rhizobium johnstonii
      16S Identity %
      83.80041011619959
      0 references
      Rhizobium brockwellii
      16S Identity %
      83.80041011619959
      POCPu
      3.9336366069039332
      G+C Difference (%)
      32.46
      0 references
      Rhizobium anhuiense
      16S Identity %
      83.79120879120879
      POCPu
      3.9503842523931505
      G+C Difference (%)
      32.71
      0 references
      Rhizobium ruizarguesonis
      16S Identity %
      83.79120879120879
      POCPu
      3.5621841488968324
      G+C Difference (%)
      32.33
      0 references
      Rhizobium laguerreae
      16S Identity %
      83.77823408624229
      POCPu
      3.814748660372544
      G+C Difference (%)
      32.36
      0 references
      Rhizobium leguminosarum
      16S Identity %
      83.77823408624229
      POCPu
      3.689629811228242
      G+C Difference (%)
      32.16
      0 references
      Ensifer canadensis
      16S Identity %
      83.70824812542604
      POCPu
      3.3649289099526065
      G+C Difference (%)
      32.54
      0 references
      Mesorhizobium neociceri
      16S Identity %
      83.64389233954451
      POCPu
      3.7070524412296564
      G+C Difference (%)
      33.949999999999996
      0 references
      Mesorhizobium loti
      16S Identity %
      83.6376404494382
      POCPu
      3.7199949729797663
      G+C Difference (%)
      33.93
      0 references
      Neorhizobium tomejilense
      16S Identity %
      83.59535201640465
      POCPu
      4.264998578333807
      G+C Difference (%)
      33.03
      0 references
      Rhizobium lusitanum
      16S Identity %
      83.55037697052776
      POCPu
      3.523591166887897
      G+C Difference (%)
      31.21
      0 references
      Tistrella bauzanensis
      16S Identity %
      83.54948805460751
      POCPu
      4.510242726803236
      G+C Difference (%)
      38.66
      0 references
      Aminobacter aminovorans
      16S Identity %
      83.52779684282773
      POCPu
      4.444444444444445
      G+C Difference (%)
      34.769999999999996
      0 references
      Ferirhizobium litorale
      16S Identity %
      83.52620830496936
      POCPu
      4.794762915782024
      G+C Difference (%)
      33.08
      0 references
      Mesorhizobium tamadayense
      16S Identity %
      83.4931506849315
      POCPu
      3.989461799021453
      G+C Difference (%)
      34.75
      0 references
      Mesorhizobium chacoense
      16S Identity %
      83.48245010323468
      0 references
      Ensifer arboris
      16S Identity %
      83.47107438016529
      0 references
      Mesorhizobium tianshanense
      16S Identity %
      83.45864661654136
      POCPu
      3.688573831551124
      G+C Difference (%)
      33.699999999999996
      0 references
      Rhizobium pisi
      16S Identity %
      83.43600273785079
      POCPu
      4.228890439637125
      G+C Difference (%)
      32.559999999999995
      0 references
      Mesorhizobium alhagi
      16S Identity %
      83.43558282208589
      POCPu
      3.9789888378200917
      G+C Difference (%)
      34.23
      0 references
      Aminobacter niigataensis
      16S Identity %
      83.41362697866484
      POCPu
      4.605936540429887
      G+C Difference (%)
      34.98
      0 references
      Endobacterium cereale
      16S Identity %
      83.3902939166097
      POCPu
      4.22302374511572
      G+C Difference (%)
      30.35
      0 references
      Bartonella apis
      16S Identity %
      83.39006126616746
      POCPu
      7.986348122866895
      G+C Difference (%)
      17.03
      0 references
      Rhizobium lentis
      16S Identity %
      83.37912087912088
      POCPu
      4.109390826219071
      G+C Difference (%)
      32.769999999999996
      0 references
      Shinella lacus
      16S Identity %
      83.36741649625085
      POCPu
      4.175057054638207
      G+C Difference (%)
      35.19
      0 references
      Mesorhizobium wenxiniae
      16S Identity %
      83.36741649625085
      POCPu
      4.03790688092295
      G+C Difference (%)
      33.46
      0 references
      Aminobacter aganoensis
      16S Identity %
      83.35625859697386
      POCPu
      4.406617881005409
      G+C Difference (%)
      35.47
      0 references
      Rhizobium etli
      16S Identity %
      83.32194121667807
      POCPu
      4.020028612303291
      G+C Difference (%)
      32.61
      0 references
      Rhizobium aethiopicum
      16S Identity %
      83.32194121667807
      POCPu
      4.130808950086059
      G+C Difference (%)
      32.65
      0 references
      Rhizobium dioscoreae
      16S Identity %
      83.29911019849419
      POCPu
      3.9679189531447867
      G+C Difference (%)
      31.229999999999997
      0 references
      Rhizobium rhizogenes
      16S Identity %
      83.29896907216495
      POCPu
      3.9513262236806126
      G+C Difference (%)
      31.489999999999995
      0 references
      Shinella yambaruensis
      16S Identity %
      83.2867132867133
      POCPu
      4.245810055865921
      G+C Difference (%)
      37.2
      0 references
      Oricola indica
      16S Identity %
      83.25391422736556
      POCPu
      5.325339446305766
      G+C Difference (%)
      33.67
      0 references
      Rhizobium phaseoli
      16S Identity %
      83.24213406292749
      POCPu
      4.013615090058148
      G+C Difference (%)
      32.94
      0 references
      Mesorhizobium jarvisii
      16S Identity %
      83.24213406292749
      POCPu
      3.951029493600445
      G+C Difference (%)
      34.78
      0 references
      Mesorhizobium comanense
      16S Identity %
      83.23108384458078
      POCPu
      3.9518450667364564
      G+C Difference (%)
      35.11
      0 references
      Mesorhizobium muleiense
      16S Identity %
      83.23066392881589
      POCPu
      4.197632810349574
      G+C Difference (%)
      33.839999999999996
      0 references
      Ensifer meliloti
      16S Identity %
      83.19672131147541
      0 references
      Rhizobium cellulosilyticum
      16S Identity %
      83.09377138945926
      0 references
      Paenochrobactrum glaciei
      16S Identity %
      83.03693570451436
      POCPu
      6.218727662616154
      G+C Difference (%)
      20.58
      0 references
      Pararhizobium giardinii
      16S Identity %
      82.99180327868852
      0 references
      Devosia psychrophila
      16S Identity %
      82.76333789329685
      POCPu
      4.3907156673114125
      G+C Difference (%)
      32.68
      0 references
      Brucella oryzae
      16S Identity %
      82.65027322404372
      POCPu
      4.4615572668377945
      G+C Difference (%)
      27.689999999999998
      0 references
      Rhizobium giardinii
      POCPu
      3.9883672621520567
      G+C Difference (%)
      32.239999999999995
      0 references
      Sinorhizobium meliloti
      POCPu
      3.814432989690722
      G+C Difference (%)
      33.58
      0 references
      Sinorhizobium arboris
      POCPu
      4.073550212164074
      G+C Difference (%)
      33.6
      0 references
      Sinorhizobium alkalisoli
      POCPu
      4.508259996912151
      G+C Difference (%)
      33.82
      0 references
      CAZyme
      GH28
      Occurance
      1
      0 references
      GH73
      Occurance
      1
      0 references
      GT13
      Occurance
      2
      0 references
      GT51
      Occurance
      1
      0 references
      GT4
      Occurance
      5
      0 references
      GT32
      Occurance
      1
      0 references
      GT1
      Occurance
      2
      0 references
      GT28
      Occurance
      4
      0 references
      GT2
      Occurance
      6
      0 references
      GT61
      Occurance
      1
      0 references
      GT9
      Occurance
      1
      0 references
      GT17
      Occurance
      1
      0 references
      GT41
      Occurance
      1
      0 references
      GT26
      Occurance
      1
      0 references
      PL0
      Occurance
      1
      0 references
      CE11
      Occurance
      1
      0 references
      CBM50
      Occurance
      2
      0 references
      CBM32
      Occurance
      1
      0 references
      CBM48
      Occurance
      1
      0 references
      Ecosystem
      MAGs
      no MAG matches found
      0 references
       
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